RNA–Protein interactions for RNA: ENST00000589733.1

MBD1-219, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 2

Gene MBD1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-219ENST00000589733 PREX1Q8TCU6 1659 aa23.41■■□□□ 1.34
MBD1-219ENST00000589733 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.4■■□□□ 1.34
MBD1-219ENST00000589733 KDM5DQ9BY66 1539 aa23.4■■□□□ 1.34
MBD1-219ENST00000589733 PPP6R1Q9UPN7 881 aa23.4■■□□□ 1.34
MBD1-219ENST00000589733 RRBP1Q9P2E9 1410 aaKnown RBP23.37■■□□□ 1.33
MBD1-219ENST00000589733 NCOA1Q15788 1441 aa23.36■■□□□ 1.33
MBD1-219ENST00000589733 RRP7BPQ9NSQ0 103 aa23.36■■□□□ 1.33
MBD1-219ENST00000589733 CHIC2Q9UKJ5 165 aa23.36■■□□□ 1.33
MBD1-219ENST00000589733 SETD1BQ9UPS6 1966 aaKnown RBP23.35■■□□□ 1.33
MBD1-219ENST00000589733 DEPDC5O75140 1603 aa23.34■■□□□ 1.33
MBD1-219ENST00000589733 MROH1Q8NDA8 1641 aa23.33■■□□□ 1.33
MBD1-219ENST00000589733 PRDM15P57071 1507 aaPredicted RBP23.33■■□□□ 1.32
MBD1-219ENST00000589733 CEP152O94986 1710 aa23.32■■□□□ 1.32
MBD1-219ENST00000589733 LMTK3Q96Q04 1460 aa23.31■■□□□ 1.32
MBD1-219ENST00000589733 CEBPAP49715 358 aaPredicted RBP23.31■■□□□ 1.32
MBD1-219ENST00000589733 ZMYM3Q14202 1370 aa23.3■■□□□ 1.32
MBD1-219ENST00000589733 NPATQ14207 1427 aa23.3■■□□□ 1.32
MBD1-219ENST00000589733 ROCK1Q13464 1354 aa23.29■■□□□ 1.32
MBD1-219ENST00000589733 ABCC3O15438 1527 aa23.28■■□□□ 1.32
MBD1-219ENST00000589733 PTPRKQ15262 1439 aa23.28■■□□□ 1.32
MBD1-219ENST00000589733 WASHC2CQ9Y4E1 1318 aa23.28■■□□□ 1.32
MBD1-219ENST00000589733 UHRF1BP1Q6BDS2 1440 aa23.27■■□□□ 1.32
MBD1-219ENST00000589733 CAMSAP1Q5T5Y3 1602 aa23.27■■□□□ 1.32
MBD1-219ENST00000589733 ITGAEP38570 1179 aa23.26■■□□□ 1.31
MBD1-219ENST00000589733 PZPP20742 1482 aa23.25■■□□□ 1.31
MBD1-219ENST00000589733 MYO3AQ8NEV4 1616 aa23.25■■□□□ 1.31
MBD1-219ENST00000589733 ANKRD50Q9ULJ7 1429 aa23.25■■□□□ 1.31
MBD1-219ENST00000589733 KANK1Q14678 1352 aa23.24■■□□□ 1.31
MBD1-219ENST00000589733 ZNF142P52746 1687 aaPredicted RBP23.22■■□□□ 1.31
MBD1-219ENST00000589733 GCC2Q8IWJ2 1684 aa23.2■■□□□ 1.3
MBD1-219ENST00000589733 UNC13BO14795 1591 aa23.2■■□□□ 1.3
MBD1-219ENST00000589733 VWDEQ8N2E2 1590 aa23.18■■□□□ 1.3
MBD1-219ENST00000589733 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.16■■□□□ 1.3
MBD1-219ENST00000589733 LMTK2Q8IWU2 1503 aa23.16■■□□□ 1.3
MBD1-219ENST00000589733 CEP170BQ9Y4F5 1589 aaPredicted RBP23.15■■□□□ 1.3
MBD1-219ENST00000589733 SPATA31D1Q6ZQQ2 1576 aa23.14■■□□□ 1.3
MBD1-219ENST00000589733 CFAP65Q6ZU64 1925 aaKnown RBP23.13■■□□□ 1.29
MBD1-219ENST00000589733 TNRQ92752 1358 aa23.13■■□□□ 1.29
MBD1-219ENST00000589733 EFCAB6Q5THR3 1501 aa23.13■■□□□ 1.29
MBD1-219ENST00000589733 TET3O43151 1660 aa23.13■■□□□ 1.29
MBD1-219ENST00000589733 ARHGAP31Q2M1Z3 1444 aa23.12■■□□□ 1.29
MBD1-219ENST00000589733 ERVK-7P63135 1459 aa23.11■■□□□ 1.29
MBD1-219ENST00000589733 HSPA2P54652 639 aa23.11■■□□□ 1.29
MBD1-219ENST00000589733 IQGAP3Q86VI3 1631 aa23.11■■□□□ 1.29
MBD1-219ENST00000589733 A2ML1A8K2U0 1454 aa23.09■■□□□ 1.29
MBD1-219ENST00000589733 NLRP1Q9C000 1473 aa23.08■■□□□ 1.29
MBD1-219ENST00000589733 FBXO31Q5XUX0 539 aaPredicted RBP23.07■■□□□ 1.28
MBD1-219ENST00000589733 HFM1A2PYH4 1435 aa23.07■■□□□ 1.28
MBD1-219ENST00000589733 NAIPQ13075 1403 aa23.06■■□□□ 1.28
MBD1-219ENST00000589733 RPRD2Q5VT52 1461 aaKnown RBP23.05■■□□□ 1.28
MBD1-219ENST00000589733 STRCQ7RTU9 1775 aa23.04■■□□□ 1.28
MBD1-219ENST00000589733 PLA2R1Q13018 1463 aa23.01■■□□□ 1.27
MBD1-219ENST00000589733 UGGT1Q9NYU2 1555 aa23.01■■□□□ 1.27
MBD1-219ENST00000589733 POLR1AO95602 1720 aaPredicted RBP23■■□□□ 1.27
MBD1-219ENST00000589733 E9PCH4 1651 aa23■■□□□ 1.27
MBD1-219ENST00000589733 NUP155O75694 1391 aa22.99■■□□□ 1.27
MBD1-219ENST00000589733 UBR1Q8IWV7 1749 aa22.98■■□□□ 1.27
MBD1-219ENST00000589733 SYNMO15061 1565 aa22.97■■□□□ 1.27
MBD1-219ENST00000589733 KDM5AP29375 1690 aaKnown RBP22.96■■□□□ 1.27
MBD1-219ENST00000589733 PIK3C2BO00750 1634 aa22.95■■□□□ 1.26
MBD1-219ENST00000589733 NOS1P29475 1434 aa22.94■■□□□ 1.26
MBD1-219ENST00000589733 DMRT2Q9Y5R5 561 aa22.94■■□□□ 1.26
MBD1-219ENST00000589733 SPHKAPQ2M3C7 1700 aa22.91■■□□□ 1.26
MBD1-219ENST00000589733 PKD2Q13563 968 aa22.9■■□□□ 1.26
MBD1-219ENST00000589733 THEMISQ8N1K5 641 aaPredicted RBP22.9■■□□□ 1.26
MBD1-219ENST00000589733 PTPRTO14522 1441 aa22.9■■□□□ 1.26
MBD1-219ENST00000589733 ADGRB3O60242 1522 aa22.88■■□□□ 1.25
MBD1-219ENST00000589733 TRIM52Q96A61 297 aa22.85■■□□□ 1.25
MBD1-219ENST00000589733 NEURL4Q96JN8 1562 aa22.84■■□□□ 1.25
MBD1-219ENST00000589733 ACIN1Q9UKV3 1341 aaKnown RBP22.84■■□□□ 1.25
MBD1-219ENST00000589733 SLC52A1Q9NWF4 448 aa22.84■■□□□ 1.25
MBD1-219ENST00000589733 STAG3Q9UJ98 1225 aa22.84■■□□□ 1.25
MBD1-219ENST00000589733 NCKAP5LQ9HCH0 1330 aa22.83■■□□□ 1.25
MBD1-219ENST00000589733 MYO5BQ9ULV0 1848 aa22.83■■□□□ 1.25
MBD1-219ENST00000589733 SETD5Q9C0A6 1442 aa22.82■■□□□ 1.24
MBD1-219ENST00000589733 SLIT1O75093 1534 aa22.82■■□□□ 1.24
MBD1-219ENST00000589733 IQGAP1P46940 1657 aa22.81■■□□□ 1.24
MBD1-219ENST00000589733 ANKLE2Q86XL3 938 aa22.81■■□□□ 1.24
MBD1-219ENST00000589733 IDI1Q13907 227 aa22.8■■□□□ 1.24
MBD1-219ENST00000589733 ARHGAP23Q9P227 1491 aa22.79■■□□□ 1.24
MBD1-219ENST00000589733 SCAF11Q99590 1463 aaKnown RBP22.79■■□□□ 1.24
MBD1-219ENST00000589733 TMEM131LA2VDJ0 1609 aa22.79■■□□□ 1.24
MBD1-219ENST00000589733 TRPM2O94759 1503 aa22.78■■□□□ 1.24
MBD1-219ENST00000589733 MED14O60244 1454 aa22.78■■□□□ 1.24
MBD1-219ENST00000589733 NPHP4O75161 1426 aaPredicted RBP22.76■■□□□ 1.23
MBD1-219ENST00000589733 SLC4A1APQ9BWU0 796 aaKnown RBP22.76■■□□□ 1.23
MBD1-219ENST00000589733 KIF1BO60333 1816 aa22.75■■□□□ 1.23
MBD1-219ENST00000589733 TMEM2Q9UHN6 1383 aa22.75■■□□□ 1.23
MBD1-219ENST00000589733 CLTCL1P53675 1640 aa22.74■■□□□ 1.23
MBD1-219ENST00000589733 RAB3GAP2Q9H2M9 1393 aa22.74■■□□□ 1.23
MBD1-219ENST00000589733 EID1Q9Y6B2 187 aa22.73■■□□□ 1.23
MBD1-219ENST00000589733 CHGAP10645 457 aaKnown RBP22.69■■□□□ 1.22
MBD1-219ENST00000589733 TXNDC2Q86VQ3 553 aa22.69■■□□□ 1.22
MBD1-219ENST00000589733 LTBP4Q8N2S1 1624 aa22.66■■□□□ 1.22
MBD1-219ENST00000589733 ZFYVE9O95405 1425 aa22.65■■□□□ 1.22
MBD1-219ENST00000589733 MPHOSPH9Q99550 1183 aa22.65■■□□□ 1.22
MBD1-219ENST00000589733 RIMS2Q9UQ26 1411 aa22.65■■□□□ 1.22
MBD1-219ENST00000589733 LTKP29376 864 aa22.64■■□□□ 1.21
MBD1-219ENST00000589733 HDGFP51858 240 aaKnown RBP22.64■■□□□ 1.21
MBD1-219ENST00000589733 ZNF335Q9H4Z2 1342 aaPredicted RBP22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms