RNA–Protein interactions for RNA: ENST00000589537.1

NFIC-208, Transcript of nuclear factor I C, humanhuman

TSL 2

Gene NFIC, Length 977 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIC-208ENST00000589537 DNMT1P26358 1616 aaKnown RBP25.81■■□□□ 1.72
NFIC-208ENST00000589537 ABCC5O15440 1437 aa25.8■■□□□ 1.72
NFIC-208ENST00000589537 DMRT2Q9Y5R5 561 aa25.8■■□□□ 1.72
NFIC-208ENST00000589537 RNF17Q9BXT8 1623 aaKnown RBP25.8■■□□□ 1.72
NFIC-208ENST00000589537 DAPK1P53355 1430 aa25.8■■□□□ 1.72
NFIC-208ENST00000589537 WASHC2CQ9Y4E1 1318 aa25.78■■□□□ 1.72
NFIC-208ENST00000589537 MYO3AQ8NEV4 1616 aa25.76■■□□□ 1.71
NFIC-208ENST00000589537 ZNF142P52746 1687 aaPredicted RBP25.75■■□□□ 1.71
NFIC-208ENST00000589537 PZPP20742 1482 aa25.75■■□□□ 1.71
NFIC-208ENST00000589537 KIF15Q9NS87 1388 aa25.75■■□□□ 1.71
NFIC-208ENST00000589537 ZC3H13Q5T200 1668 aaKnown RBP25.74■■□□□ 1.71
NFIC-208ENST00000589537 ERBINQ96RT1 1412 aa25.74■■□□□ 1.71
NFIC-208ENST00000589537 STRCQ7RTU9 1775 aa25.73■■□□□ 1.71
NFIC-208ENST00000589537 NCOA1Q15788 1441 aa25.71■■□□□ 1.71
NFIC-208ENST00000589537 CEP170BQ9Y4F5 1589 aaPredicted RBP25.71■■□□□ 1.71
NFIC-208ENST00000589537 ANKRD30AQ9BXX3 1397 aa25.7■■□□□ 1.71
NFIC-208ENST00000589537 ILDR1Q86SU0 546 aaPredicted RBP25.7■■□□□ 1.7
NFIC-208ENST00000589537 PTPRTO14522 1441 aa25.7■■□□□ 1.7
NFIC-208ENST00000589537 ABCC3O15438 1527 aa25.68■■□□□ 1.7
NFIC-208ENST00000589537 CAMSAP1Q5T5Y3 1602 aa25.68■■□□□ 1.7
NFIC-208ENST00000589537 TNRQ92752 1358 aa25.68■■□□□ 1.7
NFIC-208ENST00000589537 PLA2R1Q13018 1463 aa25.67■■□□□ 1.7
NFIC-208ENST00000589537 MROH1Q8NDA8 1641 aa25.66■■□□□ 1.7
NFIC-208ENST00000589537 A2ML1A8K2U0 1454 aa25.66■■□□□ 1.7
NFIC-208ENST00000589537 RRP7BPQ9NSQ0 103 aa25.66■■□□□ 1.7
NFIC-208ENST00000589537 PRDM15P57071 1507 aaPredicted RBP25.65■■□□□ 1.7
NFIC-208ENST00000589537 ADGRL2O95490 1459 aa25.65■■□□□ 1.7
NFIC-208ENST00000589537 FAM50AQ14320 339 aaKnown RBP25.63■■□□□ 1.69
NFIC-208ENST00000589537 FBXO41Q8TF61 875 aa25.63■■□□□ 1.69
NFIC-208ENST00000589537 NLRP1Q9C000 1473 aa25.62■■□□□ 1.69
NFIC-208ENST00000589537 PKD2Q13563 968 aa25.61■■□□□ 1.69
NFIC-208ENST00000589537 DEPDC5O75140 1603 aa25.6■■□□□ 1.69
NFIC-208ENST00000589537 FBXO31Q5XUX0 539 aaPredicted RBP25.6■■□□□ 1.69
NFIC-208ENST00000589537 CHIC2Q9UKJ5 165 aa25.59■■□□□ 1.69
NFIC-208ENST00000589537 KANK1Q14678 1352 aa25.58■■□□□ 1.69
NFIC-208ENST00000589537 SPATA31D1Q6ZQQ2 1576 aa25.58■■□□□ 1.69
NFIC-208ENST00000589537 CEP152O94986 1710 aa25.56■■□□□ 1.68
NFIC-208ENST00000589537 ARHGAP31Q2M1Z3 1444 aa25.55■■□□□ 1.68
NFIC-208ENST00000589537 CERKQ8TCT0 537 aa25.55■■□□□ 1.68
NFIC-208ENST00000589537 ERVK-7P63135 1459 aa25.54■■□□□ 1.68
NFIC-208ENST00000589537 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.53■■□□□ 1.682e-6■■■■□ 22.6
NFIC-208ENST00000589537 THEMISQ8N1K5 641 aaPredicted RBP25.51■■□□□ 1.67
NFIC-208ENST00000589537 NCKAP5LQ9HCH0 1330 aa25.51■■□□□ 1.67
NFIC-208ENST00000589537 LMTK2Q8IWU2 1503 aa25.51■■□□□ 1.67
NFIC-208ENST00000589537 UGGT1Q9NYU2 1555 aa25.51■■□□□ 1.67
NFIC-208ENST00000589537 ANKRD50Q9ULJ7 1429 aa25.5■■□□□ 1.67
NFIC-208ENST00000589537 VWDEQ8N2E2 1590 aa25.49■■□□□ 1.67
NFIC-208ENST00000589537 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.49■■□□□ 1.67
NFIC-208ENST00000589537 ROCK1Q13464 1354 aa25.48■■□□□ 1.67
NFIC-208ENST00000589537 POLR1AO95602 1720 aaPredicted RBP25.46■■□□□ 1.67
NFIC-208ENST00000589537 ANKLE2Q86XL3 938 aa25.43■■□□□ 1.66
NFIC-208ENST00000589537 LTBP4Q8N2S1 1624 aa25.43■■□□□ 1.66
NFIC-208ENST00000589537 IQSEC2Q5JU85 1478 aa25.42■■□□□ 1.66
NFIC-208ENST00000589537 EFCAB6Q5THR3 1501 aa25.41■■□□□ 1.66
NFIC-208ENST00000589537 NEURL4Q96JN8 1562 aa25.39■■□□□ 1.66
NFIC-208ENST00000589537 PPARGC1BQ86YN6 1023 aaKnown RBP25.38■■□□□ 1.65
NFIC-208ENST00000589537 MED14O60244 1454 aa25.38■■□□□ 1.65
NFIC-208ENST00000589537 RPRD2Q5VT52 1461 aaKnown RBP25.37■■□□□ 1.65
NFIC-208ENST00000589537 RRBP1Q9P2E9 1410 aaKnown RBP25.37■■□□□ 1.65
NFIC-208ENST00000589537 UNC13BO14795 1591 aa25.36■■□□□ 1.65
NFIC-208ENST00000589537 UBR1Q8IWV7 1749 aa25.35■■□□□ 1.65
NFIC-208ENST00000589537 ZNF335Q9H4Z2 1342 aaPredicted RBP25.34■■□□□ 1.65
NFIC-208ENST00000589537 CFAP65Q6ZU64 1925 aaKnown RBP25.33■■□□□ 1.65
NFIC-208ENST00000589537 NPHP4O75161 1426 aaPredicted RBP25.33■■□□□ 1.65
NFIC-208ENST00000589537 TET3O43151 1660 aa25.32■■□□□ 1.64
NFIC-208ENST00000589537 KDM5AP29375 1690 aaKnown RBP25.32■■□□□ 1.64
NFIC-208ENST00000589537 NOS1P29475 1434 aa25.32■■□□□ 1.64
NFIC-208ENST00000589537 SLIT1O75093 1534 aa25.31■■□□□ 1.64
NFIC-208ENST00000589537 ITGAEP38570 1179 aa25.3■■□□□ 1.64
NFIC-208ENST00000589537 ARHGAP23Q9P227 1491 aa25.29■■□□□ 1.64
NFIC-208ENST00000589537 PIK3C2BO00750 1634 aa25.29■■□□□ 1.64
NFIC-208ENST00000589537 SYNMO15061 1565 aa25.28■■□□□ 1.64
NFIC-208ENST00000589537 IQGAP1P46940 1657 aa25.28■■□□□ 1.64
NFIC-208ENST00000589537 GCC2Q8IWJ2 1684 aa25.28■■□□□ 1.64
NFIC-208ENST00000589537 SCAF11Q99590 1463 aaKnown RBP25.28■■□□□ 1.64
NFIC-208ENST00000589537 SLC52A1Q9NWF4 448 aa25.27■■□□□ 1.64
NFIC-208ENST00000589537 CPS1P31327 1500 aa25.27■■□□□ 1.64
NFIC-208ENST00000589537 STAG3Q9UJ98 1225 aa25.26■■□□□ 1.63
NFIC-208ENST00000589537 IQGAP3Q86VI3 1631 aa25.26■■□□□ 1.63
NFIC-208ENST00000589537 EID1Q9Y6B2 187 aa25.24■■□□□ 1.63
NFIC-208ENST00000589537 TMEM2Q9UHN6 1383 aa25.23■■□□□ 1.63
NFIC-208ENST00000589537 IDI1Q13907 227 aa25.23■■□□□ 1.63
NFIC-208ENST00000589537 ADGRB3O60242 1522 aa25.22■■□□□ 1.63
NFIC-208ENST00000589537 TXNDC2Q86VQ3 553 aa25.21■■□□□ 1.63
NFIC-208ENST00000589537 NUP155O75694 1391 aa25.2■■□□□ 1.63
NFIC-208ENST00000589537 E9PCH4 1651 aa25.17■■□□□ 1.62
NFIC-208ENST00000589537 LTKP29376 864 aa25.16■■□□□ 1.62
NFIC-208ENST00000589537 NAIPQ13075 1403 aa25.13■■□□□ 1.61
NFIC-208ENST00000589537 UBAP1LF5GYI3 381 aa25.11■■□□□ 1.61
NFIC-208ENST00000589537 HFM1A2PYH4 1435 aa25.11■■□□□ 1.61
NFIC-208ENST00000589537 HDGFP51858 240 aaKnown RBP25.09■■□□□ 1.61
NFIC-208ENST00000589537 TMEM131LA2VDJ0 1609 aa25.08■■□□□ 1.61
NFIC-208ENST00000589537 ZFYVE9O95405 1425 aa25.05■■□□□ 1.6
NFIC-208ENST00000589537 TOM1O60784 492 aa25.03■■□□□ 1.6
NFIC-208ENST00000589537 RIMS2Q9UQ26 1411 aa25.03■■□□□ 1.6
NFIC-208ENST00000589537 LRRC7Q96NW7 1537 aa25.02■■□□□ 1.6
NFIC-208ENST00000589537 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.02■■□□□ 1.6
NFIC-208ENST00000589537 STRCP1A6NGW2 1772 aa25.02■■□□□ 1.6
NFIC-208ENST00000589537 SPHKAPQ2M3C7 1700 aa25.01■■□□□ 1.59
NFIC-208ENST00000589537 PLEKHG1Q9ULL1 1385 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms