RNA–Protein interactions for RNA: ENST00000587721.1

RDH13-209, Transcript of retinol dehydrogenase 13, humanhuman

TSL 4

Gene RDH13, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-209ENST00000587721 FAM135AQ9P2D6 1515 aa21.72■■□□□ 1.07
RDH13-209ENST00000587721 LOC105371045A0A1W2PR82 267 aa21.72■■□□□ 1.07
RDH13-209ENST00000587721 A2ML1A8K2U0 1454 aa21.71■■□□□ 1.07
RDH13-209ENST00000587721 ARHGEF5Q12774 1597 aa21.7■■□□□ 1.06
RDH13-209ENST00000587721 KDM5DQ9BY66 1539 aa21.7■■□□□ 1.06
RDH13-209ENST00000587721 TNRQ92752 1358 aa21.69■■□□□ 1.06
RDH13-209ENST00000587721 TCOF1Q13428 1488 aaKnown RBP21.69■■□□□ 1.06
RDH13-209ENST00000587721 ZNF335Q9H4Z2 1342 aaPredicted RBP21.68■■□□□ 1.06
RDH13-209ENST00000587721 PZPP20742 1482 aa21.67■■□□□ 1.06
RDH13-209ENST00000587721 FBXO31Q5XUX0 539 aaPredicted RBP21.67■■□□□ 1.06
RDH13-209ENST00000587721 MAP3K1Q13233 1512 aa21.65■■□□□ 1.06
RDH13-209ENST00000587721 APLP2Q06481 763 aa21.65■■□□□ 1.06
RDH13-209ENST00000587721 THEMISQ8N1K5 641 aaPredicted RBP21.64■■□□□ 1.05
RDH13-209ENST00000587721 MIA2Q96PC5 1412 aa21.63■■□□□ 1.05
RDH13-209ENST00000587721 DISP3Q9P2K9 1392 aa21.63■■□□□ 1.05
RDH13-209ENST00000587721 DNMT1P26358 1616 aaKnown RBP21.62■■□□□ 1.05
RDH13-209ENST00000587721 KANK4Q5T7N3 995 aaPredicted RBP21.62■■□□□ 1.05
RDH13-209ENST00000587721 UBAP1LF5GYI3 381 aa21.61■■□□□ 1.05
RDH13-209ENST00000587721 ANKLE2Q86XL3 938 aa21.61■■□□□ 1.05
RDH13-209ENST00000587721 MYOM3Q5VTT5 1437 aa21.61■■□□□ 1.05
RDH13-209ENST00000587721 NLRP1Q9C000 1473 aa21.6■■□□□ 1.05
RDH13-209ENST00000587721 MAST1Q9Y2H9 1570 aa21.58■■□□□ 1.05
RDH13-209ENST00000587721 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.55■■□□□ 1.04
RDH13-209ENST00000587721 UGGT1Q9NYU2 1555 aa21.54■■□□□ 1.04
RDH13-209ENST00000587721 RNF17Q9BXT8 1623 aaKnown RBP21.53■■□□□ 1.04
RDH13-209ENST00000587721 EIF2AK4Q9P2K8 1649 aaKnown RBP21.53■■□□□ 1.04
RDH13-209ENST00000587721 ABCC3O15438 1527 aa21.52■■□□□ 1.04
RDH13-209ENST00000587721 ZC3H13Q5T200 1668 aaKnown RBP21.52■■□□□ 1.04
RDH13-209ENST00000587721 DUOX2Q9NRD8 1548 aa21.51■■□□□ 1.03
RDH13-209ENST00000587721 POLR1AO95602 1720 aaPredicted RBP21.51■■□□□ 1.03
RDH13-209ENST00000587721 CPS1P31327 1500 aa21.5■■□□□ 1.03
RDH13-209ENST00000587721 TOM1O60784 492 aa21.49■■□□□ 1.03
RDH13-209ENST00000587721 SHANK2Q9UPX8 1470 aa21.49■■□□□ 1.03
RDH13-209ENST00000587721 NPHP4O75161 1426 aaPredicted RBP21.48■■□□□ 1.03
RDH13-209ENST00000587721 NEURL4Q96JN8 1562 aa21.48■■□□□ 1.03
RDH13-209ENST00000587721 KIF15Q9NS87 1388 aa21.48■■□□□ 1.03
RDH13-209ENST00000587721 SPATA31D1Q6ZQQ2 1576 aa21.47■■□□□ 1.03
RDH13-209ENST00000587721 MED14O60244 1454 aa21.46■■□□□ 1.03
RDH13-209ENST00000587721 RRP7BPQ9NSQ0 103 aa21.46■■□□□ 1.03
RDH13-209ENST00000587721 SCAF1Q9H7N4 1312 aaKnown RBP21.46■■□□□ 1.03
RDH13-209ENST00000587721 ERVK-7P63135 1459 aa21.45■■□□□ 1.03
RDH13-209ENST00000587721 ERBINQ96RT1 1412 aa21.45■■□□□ 1.02
RDH13-209ENST00000587721 ABCC5O15440 1437 aa21.44■■□□□ 1.02
RDH13-209ENST00000587721 DEPDC5O75140 1603 aa21.44■■□□□ 1.02
RDH13-209ENST00000587721 ILDR2Q71H61 639 aa21.43■■□□□ 1.02
RDH13-209ENST00000587721 PIP4K2BP78356 416 aa21.42■■□□□ 1.02
RDH13-209ENST00000587721 KANK1Q14678 1352 aa21.42■■□□□ 1.02
RDH13-209ENST00000587721 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.42■■□□□ 1.02
RDH13-209ENST00000587721 MROH1Q8NDA8 1641 aa21.41■■□□□ 1.02
RDH13-209ENST00000587721 PTPN23Q9H3S7 1636 aa21.41■■□□□ 1.02
RDH13-209ENST00000587721 SOCS7O14512 581 aa21.41■■□□□ 1.02
RDH13-209ENST00000587721 DAPK1P53355 1430 aa21.4■■□□□ 1.02
RDH13-209ENST00000587721 ARHGAP31Q2M1Z3 1444 aa21.39■■□□□ 1.02
RDH13-209ENST00000587721 FGD6Q6ZV73 1430 aa21.39■■□□□ 1.02
RDH13-209ENST00000587721 ANKRD30AQ9BXX3 1397 aa21.39■■□□□ 1.02
RDH13-209ENST00000587721 VWDEQ8N2E2 1590 aa21.38■■□□□ 1.01
RDH13-209ENST00000587721 PRDM15P57071 1507 aaPredicted RBP21.38■■□□□ 1.01
RDH13-209ENST00000587721 IQGAP1P46940 1657 aa21.37■■□□□ 1.01
RDH13-209ENST00000587721 STAG3Q9UJ98 1225 aa21.37■■□□□ 1.01
RDH13-209ENST00000587721 EID1Q9Y6B2 187 aa21.37■■□□□ 1.01
RDH13-209ENST00000587721 CEP152O94986 1710 aa21.37■■□□□ 1.01
RDH13-209ENST00000587721 TXNDC2Q86VQ3 553 aa21.36■■□□□ 1.01
RDH13-209ENST00000587721 CROCC2H7BZ55 1655 aa21.36■■□□□ 1.01
RDH13-209ENST00000587721 CHIC2Q9UKJ5 165 aa21.35■■□□□ 1.01
RDH13-209ENST00000587721 HSPA1LP34931 641 aa21.34■■□□□ 1.01
RDH13-209ENST00000587721 SCAF11Q99590 1463 aaKnown RBP21.33■■□□□ 1.01
RDH13-209ENST00000587721 UBR1Q8IWV7 1749 aa21.31■■□□□ 1
RDH13-209ENST00000587721 SLIT1O75093 1534 aa21.29■■□□□ 1
RDH13-209ENST00000587721 CFAP65Q6ZU64 1925 aaKnown RBP21.29■■□□□ 1
RDH13-209ENST00000587721 ARHGAP23Q9P227 1491 aa21.29■■□□□ 1
RDH13-209ENST00000587721 LTKP29376 864 aa21.29■■□□□ 1
RDH13-209ENST00000587721 FAM50AQ14320 339 aaKnown RBP21.29■■□□□ 1
RDH13-209ENST00000587721 TMEM2Q9UHN6 1383 aa21.27■■□□□ 1
RDH13-209ENST00000587721 LRRC7Q96NW7 1537 aa21.27■■□□□ 1
RDH13-209ENST00000587721 LMTK2Q8IWU2 1503 aa21.26■□□□□ 0.99
RDH13-209ENST00000587721 SYNMO15061 1565 aa21.26■□□□□ 0.99
RDH13-209ENST00000587721 IDI1Q13907 227 aa21.24■□□□□ 0.99
RDH13-209ENST00000587721 SLC52A1Q9NWF4 448 aa21.23■□□□□ 0.99
RDH13-209ENST00000587721 ADGRL2O95490 1459 aa21.22■□□□□ 0.99
RDH13-209ENST00000587721 EFCAB6Q5THR3 1501 aa21.22■□□□□ 0.99
RDH13-209ENST00000587721 PIK3C2BO00750 1634 aa21.22■□□□□ 0.99
RDH13-209ENST00000587721 ANKRD50Q9ULJ7 1429 aa21.21■□□□□ 0.99
RDH13-209ENST00000587721 KDM5AP29375 1690 aaKnown RBP21.19■□□□□ 0.98
RDH13-209ENST00000587721 STRCP1A6NGW2 1772 aa21.18■□□□□ 0.98
RDH13-209ENST00000587721 PHF23Q9BUL5 403 aaPredicted RBP21.18■□□□□ 0.98
RDH13-209ENST00000587721 NOS1P29475 1434 aa21.18■□□□□ 0.98
RDH13-209ENST00000587721 HDGFP51858 240 aaKnown RBP21.17■□□□□ 0.98
RDH13-209ENST00000587721 BCANQ96GW7 911 aa21.17■□□□□ 0.98
RDH13-209ENST00000587721 RPRD2Q5VT52 1461 aaKnown RBP21.17■□□□□ 0.98
RDH13-209ENST00000587721 MED1Q15648 1581 aaPredicted RBP21.17■□□□□ 0.98
RDH13-209ENST00000587721 ALKQ9UM73 1620 aa21.16■□□□□ 0.98
RDH13-209ENST00000587721 KCNA6P17658 529 aa21.16■□□□□ 0.98
RDH13-209ENST00000587721 SENP3Q9H4L4 574 aaPredicted RBP21.16■□□□□ 0.98
RDH13-209ENST00000587721 SLC26A8Q96RN1 970 aa21.14■□□□□ 0.97
RDH13-209ENST00000587721 ADGRB3O60242 1522 aa21.12■□□□□ 0.97
RDH13-209ENST00000587721 PPP1R15AO75807 674 aaPredicted RBP21.11■□□□□ 0.97
RDH13-209ENST00000587721 PROSER2Q86WR7 435 aaPredicted RBP21.11■□□□□ 0.97
RDH13-209ENST00000587721 TMEM94Q12767 1356 aa21.1■□□□□ 0.97
RDH13-209ENST00000587721 TET3O43151 1660 aa21.07■□□□□ 0.96
RDH13-209ENST00000587721 ROCK1Q13464 1354 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms