RNA–Protein interactions for RNA: ENST00000586799.1

DNMT1-209, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-209ENST00000586799 FBXO31Q5XUX0 539 aaPredicted RBP19.25■□□□□ 0.67
DNMT1-209ENST00000586799 CFDP1Q9UEE9 299 aaPredicted RBP19.25■□□□□ 0.67
DNMT1-209ENST00000586799 TNRQ92752 1358 aa19.24■□□□□ 0.67
DNMT1-209ENST00000586799 ANKLE2Q86XL3 938 aa19.24■□□□□ 0.67
DNMT1-209ENST00000586799 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.22■□□□□ 0.67
DNMT1-209ENST00000586799 SENP3Q9H4L4 574 aaPredicted RBP19.22■□□□□ 0.67
DNMT1-209ENST00000586799 THEMISQ8N1K5 641 aaPredicted RBP19.2■□□□□ 0.66
DNMT1-209ENST00000586799 RGS17Q9UGC6 210 aaPredicted RBP19.2■□□□□ 0.66
DNMT1-209ENST00000586799 NPHP4O75161 1426 aaPredicted RBP19.19■□□□□ 0.66
DNMT1-209ENST00000586799 MED14O60244 1454 aa19.19■□□□□ 0.66
DNMT1-209ENST00000586799 FYCO1Q9BQS8 1478 aa19.19■□□□□ 0.66
DNMT1-209ENST00000586799 CCNB3Q8WWL7 1395 aa19.19■□□□□ 0.66
DNMT1-209ENST00000586799 PZPP20742 1482 aa19.18■□□□□ 0.66
DNMT1-209ENST00000586799 DEPDC5O75140 1603 aa19.18■□□□□ 0.66
DNMT1-209ENST00000586799 DHX29Q7Z478 1369 aaKnown RBP19.17■□□□□ 0.66
DNMT1-209ENST00000586799 ZNF644Q9H582 1327 aaPredicted RBP19.16■□□□□ 0.66
DNMT1-209ENST00000586799 STRCP1A6NGW2 1772 aa19.16■□□□□ 0.66
DNMT1-209ENST00000586799 LRRC7Q96NW7 1537 aa19.15■□□□□ 0.66
DNMT1-209ENST00000586799 RTEL1-TNFRSF6BF6WH68 1400 aa19.15■□□□□ 0.66
DNMT1-209ENST00000586799 MIA2Q96PC5 1412 aa19.15■□□□□ 0.66
DNMT1-209ENST00000586799 UGGT1Q9NYU2 1555 aa19.15■□□□□ 0.66
DNMT1-209ENST00000586799 KIF3BO15066 747 aa19.14■□□□□ 0.65
DNMT1-209ENST00000586799 NLRP1Q9C000 1473 aa19.14■□□□□ 0.65
DNMT1-209ENST00000586799 KDM5DQ9BY66 1539 aa19.14■□□□□ 0.65
DNMT1-209ENST00000586799 IQGAP1P46940 1657 aa19.14■□□□□ 0.65
DNMT1-209ENST00000586799 MBD5Q9P267 1494 aa19.13■□□□□ 0.65
DNMT1-209ENST00000586799 FAM135AQ9P2D6 1515 aa19.13■□□□□ 0.65
DNMT1-209ENST00000586799 RNF17Q9BXT8 1623 aaKnown RBP19.12■□□□□ 0.65
DNMT1-209ENST00000586799 WASHC2CQ9Y4E1 1318 aa19.12■□□□□ 0.65
DNMT1-209ENST00000586799 SYNMO15061 1565 aa19.09■□□□□ 0.65
DNMT1-209ENST00000586799 MTUS2Q5JR59 1369 aa19.06■□□□□ 0.64
DNMT1-209ENST00000586799 TIAM1Q13009 1591 aa19.06■□□□□ 0.64
DNMT1-209ENST00000586799 POTEAQ6S8J7 498 aa19.05■□□□□ 0.64
DNMT1-209ENST00000586799 ZC3H13Q5T200 1668 aaKnown RBP19.02■□□□□ 0.64
DNMT1-209ENST00000586799 XIRP1Q702N8 1843 aaKnown RBP19■□□□□ 0.63
DNMT1-209ENST00000586799 CCDC141Q6ZP82 1450 aa18.99■□□□□ 0.63
DNMT1-209ENST00000586799 FAM135BQ49AJ0 1406 aa18.98■□□□□ 0.63
DNMT1-209ENST00000586799 RSPH4AQ5TD94 716 aa18.97■□□□□ 0.63
DNMT1-209ENST00000586799 ERVK-7P63135 1459 aa18.95■□□□□ 0.62
DNMT1-209ENST00000586799 SCAF11Q99590 1463 aaKnown RBP18.95■□□□□ 0.62
DNMT1-209ENST00000586799 EHBP1L1Q8N3D4 1523 aa18.95■□□□□ 0.62
DNMT1-209ENST00000586799 UBR1Q8IWV7 1749 aa18.94■□□□□ 0.62
DNMT1-209ENST00000586799 CEP162Q5TB80 1403 aa18.94■□□□□ 0.62
DNMT1-209ENST00000586799 LTKP29376 864 aa18.94■□□□□ 0.62
DNMT1-209ENST00000586799 ABCC3O15438 1527 aa18.94■□□□□ 0.62
DNMT1-209ENST00000586799 CAMSAP2Q08AD1 1489 aa18.93■□□□□ 0.62
DNMT1-209ENST00000586799 CFAP65Q6ZU64 1925 aaKnown RBP18.92■□□□□ 0.62
DNMT1-209ENST00000586799 NCOA2Q15596 1464 aa18.92■□□□□ 0.62
DNMT1-209ENST00000586799 TXNDC2Q86VQ3 553 aa18.92■□□□□ 0.62
DNMT1-209ENST00000586799 SETD1AO15047 1707 aaKnown RBP18.91■□□□□ 0.62
DNMT1-209ENST00000586799 ARHGAP23Q9P227 1491 aa18.9■□□□□ 0.62
DNMT1-209ENST00000586799 SLIT1O75093 1534 aa18.9■□□□□ 0.62
DNMT1-209ENST00000586799 TSPY4P0CV99 314 aa18.89■□□□□ 0.61
DNMT1-209ENST00000586799 TSPY10P0CW01 314 aa18.89■□□□□ 0.61
DNMT1-209ENST00000586799 ROBO1Q9Y6N7 1651 aa18.88■□□□□ 0.61
DNMT1-209ENST00000586799 ARHGEF5Q12774 1597 aa18.87■□□□□ 0.61
DNMT1-209ENST00000586799 TMEM94Q12767 1356 aa18.86■□□□□ 0.61
DNMT1-209ENST00000586799 EID1Q9Y6B2 187 aa18.85■□□□□ 0.61
DNMT1-209ENST00000586799 CEP152O94986 1710 aa18.85■□□□□ 0.61
DNMT1-209ENST00000586799 MROH1Q8NDA8 1641 aa18.85■□□□□ 0.61
DNMT1-209ENST00000586799 EIF2AK4Q9P2K8 1649 aaKnown RBP18.83■□□□□ 0.61
DNMT1-209ENST00000586799 MAP3K1Q13233 1512 aa18.81■□□□□ 0.6
DNMT1-209ENST00000586799 KCNA6P17658 529 aa18.81■□□□□ 0.6
DNMT1-209ENST00000586799 PROSER2Q86WR7 435 aaPredicted RBP18.8■□□□□ 0.6
DNMT1-209ENST00000586799 UPF1Q92900 1129 aaKnown RBP eCLIP18.8■□□□□ 0.6
DNMT1-209ENST00000586799 RBM33Q96EV2 1170 aaKnown RBP18.8■□□□□ 0.6
DNMT1-209ENST00000586799 MAST1Q9Y2H9 1570 aa18.8■□□□□ 0.6
DNMT1-209ENST00000586799 TMEM2Q9UHN6 1383 aa18.8■□□□□ 0.6
DNMT1-209ENST00000586799 LRRC9Q6ZRR7 1453 aa18.79■□□□□ 0.6
DNMT1-209ENST00000586799 PHLPP1O60346 1717 aa18.77■□□□□ 0.6
DNMT1-209ENST00000586799 ARHGAP31Q2M1Z3 1444 aa18.77■□□□□ 0.6
DNMT1-209ENST00000586799 PIK3C2BO00750 1634 aa18.77■□□□□ 0.6
DNMT1-209ENST00000586799 JCADQ9P266 1359 aa18.77■□□□□ 0.6
DNMT1-209ENST00000586799 SLC26A8Q96RN1 970 aa18.76■□□□□ 0.59
DNMT1-209ENST00000586799 SLAIN2Q9P270 581 aa18.75■□□□□ 0.59
DNMT1-209ENST00000586799 TET3O43151 1660 aa18.75■□□□□ 0.59
DNMT1-209ENST00000586799 PRDM15P57071 1507 aaPredicted RBP18.74■□□□□ 0.59
DNMT1-209ENST00000586799 STAG3Q9UJ98 1225 aa18.74■□□□□ 0.59
DNMT1-209ENST00000586799 MSH6P52701 1360 aa18.72■□□□□ 0.59
DNMT1-209ENST00000586799 DUOX2Q9NRD8 1548 aa18.71■□□□□ 0.59
DNMT1-209ENST00000586799 TRIM52Q96A61 297 aa18.71■□□□□ 0.59
DNMT1-209ENST00000586799 NKTRP30414 1462 aaKnown RBP18.71■□□□□ 0.59
DNMT1-209ENST00000586799 EFCAB6Q5THR3 1501 aa18.7■□□□□ 0.58
DNMT1-209ENST00000586799 KDM5AP29375 1690 aaKnown RBP18.7■□□□□ 0.58
DNMT1-209ENST00000586799 NWD1Q149M9 1564 aa18.7■□□□□ 0.58
DNMT1-209ENST00000586799 ZNF772Q68DY9 489 aaPredicted RBP18.7■□□□□ 0.58
DNMT1-209ENST00000586799 LRP6O75581 1613 aa18.7■□□□□ 0.58
DNMT1-209ENST00000586799 IDI1Q13907 227 aa18.69■□□□□ 0.58
DNMT1-209ENST00000586799 COL16A1Q07092 1604 aaPredicted RBP18.69■□□□□ 0.58
DNMT1-209ENST00000586799 SPATA31A6Q5VVP1 1343 aa18.68■□□□□ 0.58
DNMT1-209ENST00000586799 MEX3CQ5U5Q3 659 aaKnown RBP18.67■□□□□ 0.58
DNMT1-209ENST00000586799 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.66■□□□□ 0.582e-8■■■■■ 29.5
DNMT1-209ENST00000586799 FGD6Q6ZV73 1430 aa18.65■□□□□ 0.58
DNMT1-209ENST00000586799 RXRBP28702 533 aa18.64■□□□□ 0.57
DNMT1-209ENST00000586799 BCANQ96GW7 911 aa18.63■□□□□ 0.57
DNMT1-209ENST00000586799 KIF15Q9NS87 1388 aa18.63■□□□□ 0.57
DNMT1-209ENST00000586799 ERBINQ96RT1 1412 aa18.63■□□□□ 0.57
DNMT1-209ENST00000586799 CHD2O14647 1828 aaKnown RBP18.62■□□□□ 0.57
DNMT1-209ENST00000586799 MYOM3Q5VTT5 1437 aa18.61■□□□□ 0.57
DNMT1-209ENST00000586799 RRP7BPQ9NSQ0 103 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms