RNA–Protein interactions for RNA: ENST00000586441.1

ERCC2-207, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 682 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-207ENST00000586441 DNMT1P26358 1616 aaKnown RBP19.11■□□□□ 0.65
ERCC2-207ENST00000586441 DAPK1P53355 1430 aa19.11■□□□□ 0.65
ERCC2-207ENST00000586441 WASHC2CQ9Y4E1 1318 aa19.11■□□□□ 0.65
ERCC2-207ENST00000586441 KDM5DQ9BY66 1539 aa19.1■□□□□ 0.65
ERCC2-207ENST00000586441 CROCC2H7BZ55 1655 aa19.1■□□□□ 0.65
ERCC2-207ENST00000586441 RNF17Q9BXT8 1623 aaKnown RBP19.1■□□□□ 0.65
ERCC2-207ENST00000586441 ERBINQ96RT1 1412 aa19.08■□□□□ 0.64
ERCC2-207ENST00000586441 PZPP20742 1482 aa19.07■□□□□ 0.64
ERCC2-207ENST00000586441 ANKRD30AQ9BXX3 1397 aa19.06■□□□□ 0.64
ERCC2-207ENST00000586441 KIF15Q9NS87 1388 aa19.06■□□□□ 0.64
ERCC2-207ENST00000586441 STRCQ7RTU9 1775 aa19.05■□□□□ 0.64
ERCC2-207ENST00000586441 ZC3H13Q5T200 1668 aaKnown RBP19.05■□□□□ 0.64
ERCC2-207ENST00000586441 NCOA1Q15788 1441 aa19.04■□□□□ 0.64
ERCC2-207ENST00000586441 RRP7BPQ9NSQ0 103 aa19.04■□□□□ 0.64
ERCC2-207ENST00000586441 PTPRTO14522 1441 aa19.03■□□□□ 0.64
ERCC2-207ENST00000586441 ZNF142P52746 1687 aaPredicted RBP19.03■□□□□ 0.64
ERCC2-207ENST00000586441 ADGRL2O95490 1459 aa19.02■□□□□ 0.63
ERCC2-207ENST00000586441 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.01■□□□□ 0.63
ERCC2-207ENST00000586441 PLA2R1Q13018 1463 aa19.01■□□□□ 0.63
ERCC2-207ENST00000586441 MYO3AQ8NEV4 1616 aa19■□□□□ 0.63
ERCC2-207ENST00000586441 TNRQ92752 1358 aa19■□□□□ 0.63
ERCC2-207ENST00000586441 A2ML1A8K2U0 1454 aa19■□□□□ 0.63
ERCC2-207ENST00000586441 MROH1Q8NDA8 1641 aa19■□□□□ 0.63
ERCC2-207ENST00000586441 ABCC3O15438 1527 aa19■□□□□ 0.63
ERCC2-207ENST00000586441 CEP170BQ9Y4F5 1589 aaPredicted RBP18.99■□□□□ 0.63
ERCC2-207ENST00000586441 PKD2Q13563 968 aa18.99■□□□□ 0.63
ERCC2-207ENST00000586441 FAM50AQ14320 339 aaKnown RBP18.99■□□□□ 0.63
ERCC2-207ENST00000586441 FBXO31Q5XUX0 539 aaPredicted RBP18.99■□□□□ 0.63
ERCC2-207ENST00000586441 ILDR1Q86SU0 546 aaPredicted RBP18.98■□□□□ 0.63
ERCC2-207ENST00000586441 PRDM15P57071 1507 aaPredicted RBP18.98■□□□□ 0.63
ERCC2-207ENST00000586441 ARHGAP31Q2M1Z3 1444 aa18.98■□□□□ 0.63
ERCC2-207ENST00000586441 NLRP1Q9C000 1473 aa18.97■□□□□ 0.63
ERCC2-207ENST00000586441 CAMSAP1Q5T5Y3 1602 aa18.97■□□□□ 0.63
ERCC2-207ENST00000586441 CHIC2Q9UKJ5 165 aa18.97■□□□□ 0.63
ERCC2-207ENST00000586441 DEPDC5O75140 1603 aa18.96■□□□□ 0.63
ERCC2-207ENST00000586441 FBXO41Q8TF61 875 aa18.96■□□□□ 0.63
ERCC2-207ENST00000586441 KANK1Q14678 1352 aa18.95■□□□□ 0.62
ERCC2-207ENST00000586441 ROCK1Q13464 1354 aa18.93■□□□□ 0.62
ERCC2-207ENST00000586441 SPATA31D1Q6ZQQ2 1576 aa18.93■□□□□ 0.62
ERCC2-207ENST00000586441 THEMISQ8N1K5 641 aaPredicted RBP18.93■□□□□ 0.62
ERCC2-207ENST00000586441 LMTK2Q8IWU2 1503 aa18.91■□□□□ 0.62
ERCC2-207ENST00000586441 CERKQ8TCT0 537 aa18.91■□□□□ 0.62
ERCC2-207ENST00000586441 ANKRD50Q9ULJ7 1429 aa18.91■□□□□ 0.62
ERCC2-207ENST00000586441 ERVK-7P63135 1459 aa18.9■□□□□ 0.62
ERCC2-207ENST00000586441 VWDEQ8N2E2 1590 aa18.9■□□□□ 0.62
ERCC2-207ENST00000586441 CEP152O94986 1710 aa18.9■□□□□ 0.62
ERCC2-207ENST00000586441 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.87■□□□□ 0.612e-8■■□□□ 11.9
ERCC2-207ENST00000586441 NCKAP5LQ9HCH0 1330 aa18.87■□□□□ 0.61
ERCC2-207ENST00000586441 UGGT1Q9NYU2 1555 aa18.87■□□□□ 0.61
ERCC2-207ENST00000586441 ANKLE2Q86XL3 938 aa18.86■□□□□ 0.61
ERCC2-207ENST00000586441 CFAP65Q6ZU64 1925 aaKnown RBP18.85■□□□□ 0.61
ERCC2-207ENST00000586441 RRBP1Q9P2E9 1410 aaKnown RBP18.83■□□□□ 0.61
ERCC2-207ENST00000586441 MED14O60244 1454 aa18.82■□□□□ 0.6
ERCC2-207ENST00000586441 RPRD2Q5VT52 1461 aaKnown RBP18.82■□□□□ 0.6
ERCC2-207ENST00000586441 LTBP4Q8N2S1 1624 aa18.82■□□□□ 0.6
ERCC2-207ENST00000586441 PPARGC1BQ86YN6 1023 aaKnown RBP18.81■□□□□ 0.6
ERCC2-207ENST00000586441 IQSEC2Q5JU85 1478 aa18.81■□□□□ 0.6
ERCC2-207ENST00000586441 POLR1AO95602 1720 aaPredicted RBP18.8■□□□□ 0.6
ERCC2-207ENST00000586441 SLC52A1Q9NWF4 448 aa18.79■□□□□ 0.6
ERCC2-207ENST00000586441 NOS1P29475 1434 aa18.79■□□□□ 0.6
ERCC2-207ENST00000586441 EFCAB6Q5THR3 1501 aa18.79■□□□□ 0.6
ERCC2-207ENST00000586441 KDM5AP29375 1690 aaKnown RBP18.78■□□□□ 0.6
ERCC2-207ENST00000586441 UNC13BO14795 1591 aa18.77■□□□□ 0.6
ERCC2-207ENST00000586441 UBR1Q8IWV7 1749 aa18.77■□□□□ 0.59
ERCC2-207ENST00000586441 NEURL4Q96JN8 1562 aa18.76■□□□□ 0.59
ERCC2-207ENST00000586441 TET3O43151 1660 aa18.76■□□□□ 0.59
ERCC2-207ENST00000586441 SLIT1O75093 1534 aa18.74■□□□□ 0.59
ERCC2-207ENST00000586441 ARHGAP23Q9P227 1491 aa18.74■□□□□ 0.59
ERCC2-207ENST00000586441 IDI1Q13907 227 aa18.74■□□□□ 0.59
ERCC2-207ENST00000586441 NPHP4O75161 1426 aaPredicted RBP18.74■□□□□ 0.59
ERCC2-207ENST00000586441 ITGAEP38570 1179 aa18.73■□□□□ 0.59
ERCC2-207ENST00000586441 ZNF335Q9H4Z2 1342 aaPredicted RBP18.73■□□□□ 0.59
ERCC2-207ENST00000586441 GCC2Q8IWJ2 1684 aa18.73■□□□□ 0.59
ERCC2-207ENST00000586441 EID1Q9Y6B2 187 aa18.71■□□□□ 0.59
ERCC2-207ENST00000586441 IQGAP3Q86VI3 1631 aa18.71■□□□□ 0.58
ERCC2-207ENST00000586441 SYNMO15061 1565 aa18.7■□□□□ 0.58
ERCC2-207ENST00000586441 STAG3Q9UJ98 1225 aa18.7■□□□□ 0.58
ERCC2-207ENST00000586441 PIK3C2BO00750 1634 aa18.7■□□□□ 0.58
ERCC2-207ENST00000586441 SCAF11Q99590 1463 aaKnown RBP18.7■□□□□ 0.58
ERCC2-207ENST00000586441 NUP155O75694 1391 aa18.69■□□□□ 0.58
ERCC2-207ENST00000586441 TMEM2Q9UHN6 1383 aa18.69■□□□□ 0.58
ERCC2-207ENST00000586441 TXNDC2Q86VQ3 553 aa18.69■□□□□ 0.58
ERCC2-207ENST00000586441 IQGAP1P46940 1657 aa18.69■□□□□ 0.58
ERCC2-207ENST00000586441 CPS1P31327 1500 aa18.69■□□□□ 0.58
ERCC2-207ENST00000586441 LTKP29376 864 aa18.67■□□□□ 0.58
ERCC2-207ENST00000586441 HDGFP51858 240 aaKnown RBP18.66■□□□□ 0.58
ERCC2-207ENST00000586441 NAIPQ13075 1403 aa18.66■□□□□ 0.58
ERCC2-207ENST00000586441 E9PCH4 1651 aa18.64■□□□□ 0.57
ERCC2-207ENST00000586441 HFM1A2PYH4 1435 aa18.64■□□□□ 0.57
ERCC2-207ENST00000586441 ADGRB3O60242 1522 aa18.63■□□□□ 0.57
ERCC2-207ENST00000586441 ACIN1Q9UKV3 1341 aaKnown RBP18.6■□□□□ 0.57
ERCC2-207ENST00000586441 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.58■□□□□ 0.56
ERCC2-207ENST00000586441 TMEM131LA2VDJ0 1609 aa18.58■□□□□ 0.56
ERCC2-207ENST00000586441 ZFYVE9O95405 1425 aa18.56■□□□□ 0.56
ERCC2-207ENST00000586441 TOM1O60784 492 aa18.55■□□□□ 0.56
ERCC2-207ENST00000586441 UBAP1LF5GYI3 381 aa18.54■□□□□ 0.56
ERCC2-207ENST00000586441 TRIM26Q12899 539 aaPredicted RBP18.54■□□□□ 0.56
ERCC2-207ENST00000586441 PLEKHG1Q9ULL1 1385 aa18.54■□□□□ 0.56
ERCC2-207ENST00000586441 MYO5BQ9ULV0 1848 aa18.53■□□□□ 0.56
ERCC2-207ENST00000586441 STRCP1A6NGW2 1772 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms