RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 ERBINQ96RT1 1412 aa25.01■■□□□ 1.59
ERBB2-222ENST00000584908 ANKRD30AQ9BXX3 1397 aa25.01■■□□□ 1.59
ERBB2-222ENST00000584908 CEBPAP49715 358 aaPredicted RBP25.01■■□□□ 1.59
ERBB2-222ENST00000584908 LMTK3Q96Q04 1460 aa25■■□□□ 1.59
ERBB2-222ENST00000584908 PREX1Q8TCU6 1659 aa24.99■■□□□ 1.59
ERBB2-222ENST00000584908 RRBP1Q9P2E9 1410 aaKnown RBP24.99■■□□□ 1.59
ERBB2-222ENST00000584908 ZMYM3Q14202 1370 aa24.98■■□□□ 1.59
ERBB2-222ENST00000584908 KDM5DQ9BY66 1539 aa24.98■■□□□ 1.59
ERBB2-222ENST00000584908 MROH1Q8NDA8 1641 aa24.98■■□□□ 1.59
ERBB2-222ENST00000584908 RRP7BPQ9NSQ0 103 aa24.96■■□□□ 1.59
ERBB2-222ENST00000584908 NPATQ14207 1427 aa24.96■■□□□ 1.59
ERBB2-222ENST00000584908 PTPRKQ15262 1439 aa24.96■■□□□ 1.59
ERBB2-222ENST00000584908 CHIC2Q9UKJ5 165 aa24.95■■□□□ 1.58
ERBB2-222ENST00000584908 ZC3H13Q5T200 1668 aaKnown RBP24.95■■□□□ 1.58
ERBB2-222ENST00000584908 DEPDC5O75140 1603 aa24.95■■□□□ 1.58
ERBB2-222ENST00000584908 PLPPR3Q6T4P5 718 aa24.94■■□□□ 1.58
ERBB2-222ENST00000584908 PRDM15P57071 1507 aaPredicted RBP24.92■■□□□ 1.58
ERBB2-222ENST00000584908 ROCK1Q13464 1354 aa24.91■■□□□ 1.58
ERBB2-222ENST00000584908 ABCC3O15438 1527 aa24.89■■□□□ 1.58
ERBB2-222ENST00000584908 WASHC2CQ9Y4E1 1318 aa24.89■■□□□ 1.57
ERBB2-222ENST00000584908 UHRF1BP1Q6BDS2 1440 aa24.87■■□□□ 1.57
ERBB2-222ENST00000584908 PZPP20742 1482 aa24.87■■□□□ 1.57
ERBB2-222ENST00000584908 CEP152O94986 1710 aa24.85■■□□□ 1.57
ERBB2-222ENST00000584908 ANKRD50Q9ULJ7 1429 aa24.85■■□□□ 1.57
ERBB2-222ENST00000584908 VWDEQ8N2E2 1590 aa24.84■■□□□ 1.57
ERBB2-222ENST00000584908 CAMSAP1Q5T5Y3 1602 aa24.82■■□□□ 1.56
ERBB2-222ENST00000584908 MYO3AQ8NEV4 1616 aa24.82■■□□□ 1.56
ERBB2-222ENST00000584908 ZNF142P52746 1687 aaPredicted RBP24.82■■□□□ 1.56
ERBB2-222ENST00000584908 LMTK2Q8IWU2 1503 aa24.8■■□□□ 1.56
ERBB2-222ENST00000584908 ARHGAP31Q2M1Z3 1444 aa24.78■■□□□ 1.56
ERBB2-222ENST00000584908 HSPA2P54652 639 aa24.77■■□□□ 1.56
ERBB2-222ENST00000584908 UNC13BO14795 1591 aa24.76■■□□□ 1.55
ERBB2-222ENST00000584908 KANK1Q14678 1352 aa24.76■■□□□ 1.55
ERBB2-222ENST00000584908 SPATA31D1Q6ZQQ2 1576 aa24.76■■□□□ 1.55
ERBB2-222ENST00000584908 ITGAEP38570 1179 aa24.75■■□□□ 1.55
ERBB2-222ENST00000584908 CEP170BQ9Y4F5 1589 aaPredicted RBP24.74■■□□□ 1.55
ERBB2-222ENST00000584908 FBXO31Q5XUX0 539 aaPredicted RBP24.74■■□□□ 1.55
ERBB2-222ENST00000584908 TNRQ92752 1358 aa24.73■■□□□ 1.55
ERBB2-222ENST00000584908 STRCQ7RTU9 1775 aa24.72■■□□□ 1.55
ERBB2-222ENST00000584908 A2ML1A8K2U0 1454 aa24.71■■□□□ 1.55
ERBB2-222ENST00000584908 ERVK-7P63135 1459 aa24.71■■□□□ 1.55
ERBB2-222ENST00000584908 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.71■■□□□ 1.55
ERBB2-222ENST00000584908 GCC2Q8IWJ2 1684 aa24.7■■□□□ 1.54
ERBB2-222ENST00000584908 CFAP65Q6ZU64 1925 aaKnown RBP24.7■■□□□ 1.54
ERBB2-222ENST00000584908 EFCAB6Q5THR3 1501 aa24.69■■□□□ 1.54
ERBB2-222ENST00000584908 NLRP1Q9C000 1473 aa24.69■■□□□ 1.54
ERBB2-222ENST00000584908 TET3O43151 1660 aa24.67■■□□□ 1.54
ERBB2-222ENST00000584908 IQGAP3Q86VI3 1631 aa24.66■■□□□ 1.54
ERBB2-222ENST00000584908 NAIPQ13075 1403 aa24.66■■□□□ 1.54
ERBB2-222ENST00000584908 PLA2R1Q13018 1463 aa24.65■■□□□ 1.54
ERBB2-222ENST00000584908 HFM1A2PYH4 1435 aa24.64■■□□□ 1.54
ERBB2-222ENST00000584908 RPRD2Q5VT52 1461 aaKnown RBP24.63■■□□□ 1.53
ERBB2-222ENST00000584908 NOS1P29475 1434 aa24.59■■□□□ 1.53
ERBB2-222ENST00000584908 UGGT1Q9NYU2 1555 aa24.58■■□□□ 1.53
ERBB2-222ENST00000584908 DMRT2Q9Y5R5 561 aa24.57■■□□□ 1.52
ERBB2-222ENST00000584908 SYNMO15061 1565 aa24.56■■□□□ 1.52
ERBB2-222ENST00000584908 E9PCH4 1651 aa24.56■■□□□ 1.52
ERBB2-222ENST00000584908 NUP155O75694 1391 aa24.56■■□□□ 1.52
ERBB2-222ENST00000584908 PTPRTO14522 1441 aa24.56■■□□□ 1.52
ERBB2-222ENST00000584908 UBR1Q8IWV7 1749 aa24.55■■□□□ 1.52
ERBB2-222ENST00000584908 KDM5AP29375 1690 aaKnown RBP24.55■■□□□ 1.52
ERBB2-222ENST00000584908 PKD2Q13563 968 aa24.53■■□□□ 1.52
ERBB2-222ENST00000584908 POLR1AO95602 1720 aaPredicted RBP24.52■■□□□ 1.52
ERBB2-222ENST00000584908 THEMISQ8N1K5 641 aaPredicted RBP24.52■■□□□ 1.52
ERBB2-222ENST00000584908 PIK3C2BO00750 1634 aa24.51■■□□□ 1.51
ERBB2-222ENST00000584908 NEURL4Q96JN8 1562 aa24.47■■□□□ 1.51
ERBB2-222ENST00000584908 NCKAP5LQ9HCH0 1330 aa24.46■■□□□ 1.51
ERBB2-222ENST00000584908 SLC52A1Q9NWF4 448 aa24.46■■□□□ 1.51
ERBB2-222ENST00000584908 SLIT1O75093 1534 aa24.45■■□□□ 1.5
ERBB2-222ENST00000584908 ARHGAP23Q9P227 1491 aa24.45■■□□□ 1.5
ERBB2-222ENST00000584908 IDI1Q13907 227 aa24.44■■□□□ 1.5
ERBB2-222ENST00000584908 MED14O60244 1454 aa24.43■■□□□ 1.5
ERBB2-222ENST00000584908 ADGRB3O60242 1522 aa24.42■■□□□ 1.5
ERBB2-222ENST00000584908 ANKLE2Q86XL3 938 aa24.41■■□□□ 1.5
ERBB2-222ENST00000584908 SPHKAPQ2M3C7 1700 aa24.41■■□□□ 1.5
ERBB2-222ENST00000584908 TMEM131LA2VDJ0 1609 aa24.37■■□□□ 1.49
ERBB2-222ENST00000584908 MYO5BQ9ULV0 1848 aa24.37■■□□□ 1.49
ERBB2-222ENST00000584908 SETD5Q9C0A6 1442 aa24.37■■□□□ 1.49
ERBB2-222ENST00000584908 ACIN1Q9UKV3 1341 aaKnown RBP24.36■■□□□ 1.49
ERBB2-222ENST00000584908 TMEM2Q9UHN6 1383 aa24.36■■□□□ 1.49
ERBB2-222ENST00000584908 SCAF11Q99590 1463 aaKnown RBP24.35■■□□□ 1.49
ERBB2-222ENST00000584908 IQGAP1P46940 1657 aa24.35■■□□□ 1.49
ERBB2-222ENST00000584908 NPHP4O75161 1426 aaPredicted RBP24.34■■□□□ 1.49
ERBB2-222ENST00000584908 TRIM52Q96A61 297 aa24.34■■□□□ 1.49
ERBB2-222ENST00000584908 LTBP4Q8N2S1 1624 aa24.33■■□□□ 1.49
ERBB2-222ENST00000584908 STAG3Q9UJ98 1225 aa24.33■■□□□ 1.48
ERBB2-222ENST00000584908 TRPM2O94759 1503 aa24.32■■□□□ 1.48
ERBB2-222ENST00000584908 LTKP29376 864 aa24.31■■□□□ 1.48
ERBB2-222ENST00000584908 SLC4A1APQ9BWU0 796 aaKnown RBP24.29■■□□□ 1.48
ERBB2-222ENST00000584908 ZFYVE9O95405 1425 aa24.28■■□□□ 1.48
ERBB2-222ENST00000584908 TXNDC2Q86VQ3 553 aa24.28■■□□□ 1.48
ERBB2-222ENST00000584908 EID1Q9Y6B2 187 aa24.28■■□□□ 1.48
ERBB2-222ENST00000584908 RAB3GAP2Q9H2M9 1393 aa24.27■■□□□ 1.48
ERBB2-222ENST00000584908 CLTCL1P53675 1640 aa24.27■■□□□ 1.48
ERBB2-222ENST00000584908 CERKQ8TCT0 537 aa24.26■■□□□ 1.47
ERBB2-222ENST00000584908 ZNF335Q9H4Z2 1342 aaPredicted RBP24.24■■□□□ 1.47
ERBB2-222ENST00000584908 HRCP23327 699 aa24.23■■□□□ 1.47
ERBB2-222ENST00000584908 KIF1BO60333 1816 aa24.22■■□□□ 1.47
ERBB2-222ENST00000584908 MPHOSPH9Q99550 1183 aa24.22■■□□□ 1.47
ERBB2-222ENST00000584908 RIMS2Q9UQ26 1411 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms