RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 MYO3AQ8NEV4 1616 aa20.61■□□□□ 0.89
CSNK1D-220ENST00000581737 ATP7AQ04656 1500 aa20.61■□□□□ 0.89
CSNK1D-220ENST00000581737 GGT6Q6P531 493 aa20.6■□□□□ 0.89
CSNK1D-220ENST00000581737 A2MP01023 1474 aa20.6■□□□□ 0.89
CSNK1D-220ENST00000581737 CEP170BQ9Y4F5 1589 aaPredicted RBP20.59■□□□□ 0.89
CSNK1D-220ENST00000581737 PLA2R1Q13018 1463 aa20.59■□□□□ 0.89
CSNK1D-220ENST00000581737 INO80Q9ULG1 1556 aaPredicted RBP20.59■□□□□ 0.89
CSNK1D-220ENST00000581737 PKD2Q13563 968 aa20.58■□□□□ 0.89
CSNK1D-220ENST00000581737 DNMT1P26358 1616 aaKnown RBP20.57■□□□□ 0.88
CSNK1D-220ENST00000581737 ZNF142P52746 1687 aaPredicted RBP20.57■□□□□ 0.88
CSNK1D-220ENST00000581737 CROCC2H7BZ55 1655 aa20.56■□□□□ 0.88
CSNK1D-220ENST00000581737 FAM50AQ14320 339 aaKnown RBP20.55■□□□□ 0.88
CSNK1D-220ENST00000581737 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.55■□□□□ 0.884e-6■■■■□ 23.1
CSNK1D-220ENST00000581737 SHANK2Q9UPX8 1470 aa20.55■□□□□ 0.88
CSNK1D-220ENST00000581737 MAST1Q9Y2H9 1570 aa20.55■□□□□ 0.88
CSNK1D-220ENST00000581737 RTEL1-TNFRSF6BF6WH68 1400 aa20.54■□□□□ 0.88
CSNK1D-220ENST00000581737 RRBP1Q9P2E9 1410 aaKnown RBP20.54■□□□□ 0.88
CSNK1D-220ENST00000581737 TSPY4P0CV99 314 aa20.54■□□□□ 0.88
CSNK1D-220ENST00000581737 TSPY10P0CW01 314 aa20.54■□□□□ 0.88
CSNK1D-220ENST00000581737 PPP6R1Q9UPN7 881 aa20.53■□□□□ 0.88
CSNK1D-220ENST00000581737 DAPK1P53355 1430 aa20.52■□□□□ 0.87
CSNK1D-220ENST00000581737 HSPA1LP34931 641 aa20.51■□□□□ 0.87
CSNK1D-220ENST00000581737 ABCC5O15440 1437 aa20.51■□□□□ 0.87
CSNK1D-220ENST00000581737 FBXO31Q5XUX0 539 aaPredicted RBP20.5■□□□□ 0.87
CSNK1D-220ENST00000581737 ADGBQ8N7X0 1667 aa20.5■□□□□ 0.87
CSNK1D-220ENST00000581737 A2ML1A8K2U0 1454 aa20.49■□□□□ 0.87
CSNK1D-220ENST00000581737 PIP4K2BP78356 416 aa20.47■□□□□ 0.87
CSNK1D-220ENST00000581737 TRIM26Q12899 539 aaPredicted RBP20.47■□□□□ 0.87
CSNK1D-220ENST00000581737 NEURL4Q96JN8 1562 aa20.46■□□□□ 0.87
CSNK1D-220ENST00000581737 SCAF1Q9H7N4 1312 aaKnown RBP20.45■□□□□ 0.86
CSNK1D-220ENST00000581737 DHX29Q7Z478 1369 aaKnown RBP20.44■□□□□ 0.86
CSNK1D-220ENST00000581737 ADGRL2O95490 1459 aa20.42■□□□□ 0.86
CSNK1D-220ENST00000581737 MED1Q15648 1581 aaPredicted RBP20.42■□□□□ 0.86
CSNK1D-220ENST00000581737 TNRQ92752 1358 aa20.41■□□□□ 0.86
CSNK1D-220ENST00000581737 ANKRD30AQ9BXX3 1397 aa20.41■□□□□ 0.86
CSNK1D-220ENST00000581737 KIF3BO15066 747 aa20.4■□□□□ 0.86
CSNK1D-220ENST00000581737 ALKQ9UM73 1620 aa20.39■□□□□ 0.86
CSNK1D-220ENST00000581737 DUOX2Q9NRD8 1548 aa20.38■□□□□ 0.85
CSNK1D-220ENST00000581737 KIF15Q9NS87 1388 aa20.38■□□□□ 0.85
CSNK1D-220ENST00000581737 PZPP20742 1482 aa20.37■□□□□ 0.85
CSNK1D-220ENST00000581737 TOM1O60784 492 aa20.37■□□□□ 0.85
CSNK1D-220ENST00000581737 VWDEQ8N2E2 1590 aa20.37■□□□□ 0.85
CSNK1D-220ENST00000581737 CPS1P31327 1500 aa20.37■□□□□ 0.85
CSNK1D-220ENST00000581737 ROCK1Q13464 1354 aa20.36■□□□□ 0.85
CSNK1D-220ENST00000581737 ITGAEP38570 1179 aa20.35■□□□□ 0.85
CSNK1D-220ENST00000581737 CHIC2Q9UKJ5 165 aa20.35■□□□□ 0.85
CSNK1D-220ENST00000581737 EIF2AK4Q9P2K8 1649 aaKnown RBP20.35■□□□□ 0.85
CSNK1D-220ENST00000581737 POLR1AO95602 1720 aaPredicted RBP20.34■□□□□ 0.85
CSNK1D-220ENST00000581737 KDM5DQ9BY66 1539 aa20.33■□□□□ 0.85
CSNK1D-220ENST00000581737 WASHC2CQ9Y4E1 1318 aa20.33■□□□□ 0.85
CSNK1D-220ENST00000581737 ANKLE2Q86XL3 938 aa20.33■□□□□ 0.85
CSNK1D-220ENST00000581737 PCGF6Q9BYE7 350 aa20.33■□□□□ 0.85
CSNK1D-220ENST00000581737 ERBINQ96RT1 1412 aa20.33■□□□□ 0.84
CSNK1D-220ENST00000581737 NPHP4O75161 1426 aaPredicted RBP20.31■□□□□ 0.84
CSNK1D-220ENST00000581737 SENP3Q9H4L4 574 aaPredicted RBP20.31■□□□□ 0.84
CSNK1D-220ENST00000581737 RRP7BPQ9NSQ0 103 aa20.31■□□□□ 0.84
CSNK1D-220ENST00000581737 THEMISQ8N1K5 641 aaPredicted RBP20.29■□□□□ 0.84
CSNK1D-220ENST00000581737 MED14O60244 1454 aa20.29■□□□□ 0.84
CSNK1D-220ENST00000581737 UGGT1Q9NYU2 1555 aa20.28■□□□□ 0.84
CSNK1D-220ENST00000581737 RNF17Q9BXT8 1623 aaKnown RBP20.27■□□□□ 0.84
CSNK1D-220ENST00000581737 NLRP1Q9C000 1473 aa20.26■□□□□ 0.83
CSNK1D-220ENST00000581737 FAM135AQ9P2D6 1515 aa20.26■□□□□ 0.83
CSNK1D-220ENST00000581737 ANKRD50Q9ULJ7 1429 aa20.26■□□□□ 0.83
CSNK1D-220ENST00000581737 GCC2Q8IWJ2 1684 aa20.26■□□□□ 0.83
CSNK1D-220ENST00000581737 STRCP1A6NGW2 1772 aa20.25■□□□□ 0.83
CSNK1D-220ENST00000581737 LRRC7Q96NW7 1537 aa20.24■□□□□ 0.83
CSNK1D-220ENST00000581737 DEPDC5O75140 1603 aa20.24■□□□□ 0.83
CSNK1D-220ENST00000581737 PHF23Q9BUL5 403 aaPredicted RBP20.23■□□□□ 0.83
CSNK1D-220ENST00000581737 HFM1A2PYH4 1435 aa20.21■□□□□ 0.83
CSNK1D-220ENST00000581737 IQGAP1P46940 1657 aa20.21■□□□□ 0.83
CSNK1D-220ENST00000581737 ABCC3O15438 1527 aa20.21■□□□□ 0.83
CSNK1D-220ENST00000581737 PRDM15P57071 1507 aaPredicted RBP20.2■□□□□ 0.82
CSNK1D-220ENST00000581737 ZC3H13Q5T200 1668 aaKnown RBP20.19■□□□□ 0.82
CSNK1D-220ENST00000581737 RGS17Q9UGC6 210 aaPredicted RBP20.19■□□□□ 0.82
CSNK1D-220ENST00000581737 NAIPQ13075 1403 aa20.19■□□□□ 0.82
CSNK1D-220ENST00000581737 MROH1Q8NDA8 1641 aa20.18■□□□□ 0.82
CSNK1D-220ENST00000581737 ERVK-7P63135 1459 aa20.17■□□□□ 0.82
CSNK1D-220ENST00000581737 KANK1Q14678 1352 aa20.16■□□□□ 0.82
CSNK1D-220ENST00000581737 UNC13BO14795 1591 aa20.16■□□□□ 0.82
CSNK1D-220ENST00000581737 LTKP29376 864 aa20.15■□□□□ 0.82
CSNK1D-220ENST00000581737 CEP152O94986 1710 aa20.11■□□□□ 0.81
CSNK1D-220ENST00000581737 ACIN1Q9UKV3 1341 aaKnown RBP20.1■□□□□ 0.81
CSNK1D-220ENST00000581737 SYNMO15061 1565 aa20.1■□□□□ 0.81
CSNK1D-220ENST00000581737 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.09■□□□□ 0.81
CSNK1D-220ENST00000581737 UBR1Q8IWV7 1749 aa20.09■□□□□ 0.81
CSNK1D-220ENST00000581737 SCAF11Q99590 1463 aaKnown RBP20.09■□□□□ 0.81
CSNK1D-220ENST00000581737 LMTK2Q8IWU2 1503 aa20.08■□□□□ 0.81
CSNK1D-220ENST00000581737 ARHGAP23Q9P227 1491 aa20.08■□□□□ 0.81
CSNK1D-220ENST00000581737 TXNDC2Q86VQ3 553 aa20.08■□□□□ 0.81
CSNK1D-220ENST00000581737 IQGAP3Q86VI3 1631 aa20.08■□□□□ 0.8
CSNK1D-220ENST00000581737 SETD5Q9C0A6 1442 aa20.08■□□□□ 0.8
CSNK1D-220ENST00000581737 TET3O43151 1660 aa20.05■□□□□ 0.8
CSNK1D-220ENST00000581737 SLIT1O75093 1534 aa20.05■□□□□ 0.8
CSNK1D-220ENST00000581737 NUP155O75694 1391 aa20.04■□□□□ 0.8
CSNK1D-220ENST00000581737 EFCAB6Q5THR3 1501 aa20.03■□□□□ 0.8
CSNK1D-220ENST00000581737 POTEAQ6S8J7 498 aa20.03■□□□□ 0.8
CSNK1D-220ENST00000581737 XIRP1Q702N8 1843 aaKnown RBP20.03■□□□□ 0.8
CSNK1D-220ENST00000581737 RBM33Q96EV2 1170 aaKnown RBP20.02■□□□□ 0.8
CSNK1D-220ENST00000581737 ARHGAP31Q2M1Z3 1444 aa20.02■□□□□ 0.79
CSNK1D-220ENST00000581737 RAB3GAP2Q9H2M9 1393 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms