RNA–Protein interactions for RNA: ENST00000581003.5

CBX1-206, Transcript of chromobox 1, humanhuman

TSL 3

Gene CBX1, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-206ENST00000581003 KIF15Q9NS87 1388 aa19.57■□□□□ 0.72
CBX1-206ENST00000581003 MYO3AQ8NEV4 1616 aa19.56■□□□□ 0.72
CBX1-206ENST00000581003 RRP7BPQ9NSQ0 103 aa19.56■□□□□ 0.72
CBX1-206ENST00000581003 CHIC2Q9UKJ5 165 aa19.56■□□□□ 0.72
CBX1-206ENST00000581003 NPATQ14207 1427 aa19.55■□□□□ 0.72
CBX1-206ENST00000581003 FAM50AQ14320 339 aaKnown RBP19.55■□□□□ 0.72
CBX1-206ENST00000581003 DUOX2Q9NRD8 1548 aa19.55■□□□□ 0.72
CBX1-206ENST00000581003 EIF2AK4Q9P2K8 1649 aaKnown RBP19.54■□□□□ 0.72
CBX1-206ENST00000581003 STRCQ7RTU9 1775 aa19.53■□□□□ 0.72
CBX1-206ENST00000581003 ABCC3O15438 1527 aa19.53■□□□□ 0.72
CBX1-206ENST00000581003 FBXO31Q5XUX0 539 aaPredicted RBP19.53■□□□□ 0.72
CBX1-206ENST00000581003 WASHC2CQ9Y4E1 1318 aa19.51■□□□□ 0.71
CBX1-206ENST00000581003 CEP152O94986 1710 aa19.5■□□□□ 0.71
CBX1-206ENST00000581003 PZPP20742 1482 aa19.49■□□□□ 0.71
CBX1-206ENST00000581003 PPP6R1Q9UPN7 881 aa19.49■□□□□ 0.71
CBX1-206ENST00000581003 CEP170BQ9Y4F5 1589 aaPredicted RBP19.49■□□□□ 0.71
CBX1-206ENST00000581003 FAM135AQ9P2D6 1515 aa19.48■□□□□ 0.71
CBX1-206ENST00000581003 ZNF142P52746 1687 aaPredicted RBP19.48■□□□□ 0.71
CBX1-206ENST00000581003 ERBINQ96RT1 1412 aa19.48■□□□□ 0.71
CBX1-206ENST00000581003 PRDM15P57071 1507 aaPredicted RBP19.47■□□□□ 0.71
CBX1-206ENST00000581003 NCOA1Q15788 1441 aa19.47■□□□□ 0.71
CBX1-206ENST00000581003 ADGRL2O95490 1459 aa19.47■□□□□ 0.71
CBX1-206ENST00000581003 CAMSAP1Q5T5Y3 1602 aa19.47■□□□□ 0.71
CBX1-206ENST00000581003 ZC3H13Q5T200 1668 aaKnown RBP19.46■□□□□ 0.71
CBX1-206ENST00000581003 ANKRD30AQ9BXX3 1397 aa19.45■□□□□ 0.7
CBX1-206ENST00000581003 SETD1BQ9UPS6 1966 aaKnown RBP19.45■□□□□ 0.7
CBX1-206ENST00000581003 DEPDC5O75140 1603 aa19.45■□□□□ 0.7
CBX1-206ENST00000581003 TNRQ92752 1358 aa19.44■□□□□ 0.7
CBX1-206ENST00000581003 ILDR1Q86SU0 546 aaPredicted RBP19.42■□□□□ 0.7
CBX1-206ENST00000581003 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.42■□□□□ 0.71e-7■■□□□ 14.1
CBX1-206ENST00000581003 A2ML1A8K2U0 1454 aa19.41■□□□□ 0.7
CBX1-206ENST00000581003 ITGAEP38570 1179 aa19.4■□□□□ 0.7
CBX1-206ENST00000581003 NCKAP5LQ9HCH0 1330 aa19.4■□□□□ 0.7
CBX1-206ENST00000581003 ERVK-7P63135 1459 aa19.4■□□□□ 0.7
CBX1-206ENST00000581003 SPATA31D1Q6ZQQ2 1576 aa19.39■□□□□ 0.69
CBX1-206ENST00000581003 VWDEQ8N2E2 1590 aa19.37■□□□□ 0.69
CBX1-206ENST00000581003 ANKRD50Q9ULJ7 1429 aa19.35■□□□□ 0.69
CBX1-206ENST00000581003 PLA2R1Q13018 1463 aa19.34■□□□□ 0.69
CBX1-206ENST00000581003 PTPRTO14522 1441 aa19.34■□□□□ 0.69
CBX1-206ENST00000581003 LMTK2Q8IWU2 1503 aa19.32■□□□□ 0.68
CBX1-206ENST00000581003 NLRP1Q9C000 1473 aa19.32■□□□□ 0.68
CBX1-206ENST00000581003 RRBP1Q9P2E9 1410 aaKnown RBP19.32■□□□□ 0.68
CBX1-206ENST00000581003 NEURL4Q96JN8 1562 aa19.32■□□□□ 0.68
CBX1-206ENST00000581003 ARHGAP31Q2M1Z3 1444 aa19.31■□□□□ 0.68
CBX1-206ENST00000581003 UGGT1Q9NYU2 1555 aa19.31■□□□□ 0.68
CBX1-206ENST00000581003 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.31■□□□□ 0.68
CBX1-206ENST00000581003 EFCAB6Q5THR3 1501 aa19.3■□□□□ 0.68
CBX1-206ENST00000581003 CFAP65Q6ZU64 1925 aaKnown RBP19.3■□□□□ 0.68
CBX1-206ENST00000581003 UNC13BO14795 1591 aa19.3■□□□□ 0.68
CBX1-206ENST00000581003 ROCK1Q13464 1354 aa19.3■□□□□ 0.68
CBX1-206ENST00000581003 KANK1Q14678 1352 aa19.3■□□□□ 0.68
CBX1-206ENST00000581003 DMRT2Q9Y5R5 561 aa19.28■□□□□ 0.68
CBX1-206ENST00000581003 POLR1AO95602 1720 aaPredicted RBP19.28■□□□□ 0.68
CBX1-206ENST00000581003 SYNMO15061 1565 aa19.27■□□□□ 0.68
CBX1-206ENST00000581003 LTBP4Q8N2S1 1624 aa19.27■□□□□ 0.68
CBX1-206ENST00000581003 UBR1Q8IWV7 1749 aa19.26■□□□□ 0.67
CBX1-206ENST00000581003 CERKQ8TCT0 537 aa19.26■□□□□ 0.67
CBX1-206ENST00000581003 PIK3C2BO00750 1634 aa19.25■□□□□ 0.67
CBX1-206ENST00000581003 ZNF335Q9H4Z2 1342 aaPredicted RBP19.25■□□□□ 0.67
CBX1-206ENST00000581003 PKD2Q13563 968 aa19.23■□□□□ 0.67
CBX1-206ENST00000581003 TET3O43151 1660 aa19.22■□□□□ 0.67
CBX1-206ENST00000581003 FBXO41Q8TF61 875 aa19.22■□□□□ 0.67
CBX1-206ENST00000581003 NOS1P29475 1434 aa19.21■□□□□ 0.67
CBX1-206ENST00000581003 THEMISQ8N1K5 641 aaPredicted RBP19.2■□□□□ 0.66
CBX1-206ENST00000581003 IQGAP3Q86VI3 1631 aa19.2■□□□□ 0.66
CBX1-206ENST00000581003 E9PCH4 1651 aa19.19■□□□□ 0.66
CBX1-206ENST00000581003 GCC2Q8IWJ2 1684 aa19.18■□□□□ 0.66
CBX1-206ENST00000581003 NPHP4O75161 1426 aaPredicted RBP19.17■□□□□ 0.66
CBX1-206ENST00000581003 NAIPQ13075 1403 aa19.17■□□□□ 0.66
CBX1-206ENST00000581003 IDI1Q13907 227 aa19.17■□□□□ 0.66
CBX1-206ENST00000581003 ANKLE2Q86XL3 938 aa19.16■□□□□ 0.66
CBX1-206ENST00000581003 IQGAP1P46940 1657 aa19.16■□□□□ 0.66
CBX1-206ENST00000581003 NUP155O75694 1391 aa19.16■□□□□ 0.66
CBX1-206ENST00000581003 MED14O60244 1454 aa19.16■□□□□ 0.66
CBX1-206ENST00000581003 ARHGAP23Q9P227 1491 aa19.16■□□□□ 0.66
CBX1-206ENST00000581003 RPRD2Q5VT52 1461 aaKnown RBP19.15■□□□□ 0.66
CBX1-206ENST00000581003 ADGRB3O60242 1522 aa19.15■□□□□ 0.66
CBX1-206ENST00000581003 SLIT1O75093 1534 aa19.15■□□□□ 0.66
CBX1-206ENST00000581003 LTKP29376 864 aa19.14■□□□□ 0.65
CBX1-206ENST00000581003 SCAF11Q99590 1463 aaKnown RBP19.13■□□□□ 0.65
CBX1-206ENST00000581003 TMEM2Q9UHN6 1383 aa19.1■□□□□ 0.65
CBX1-206ENST00000581003 HFM1A2PYH4 1435 aa19.09■□□□□ 0.65
CBX1-206ENST00000581003 SENP3Q9H4L4 574 aaPredicted RBP19.09■□□□□ 0.65
CBX1-206ENST00000581003 MYO5BQ9ULV0 1848 aa19.09■□□□□ 0.65
CBX1-206ENST00000581003 STRCP1A6NGW2 1772 aa19.09■□□□□ 0.65
CBX1-206ENST00000581003 KDM5AP29375 1690 aaKnown RBP19.08■□□□□ 0.65
CBX1-206ENST00000581003 TXNDC2Q86VQ3 553 aa19.08■□□□□ 0.64
CBX1-206ENST00000581003 STAG3Q9UJ98 1225 aa19.08■□□□□ 0.64
CBX1-206ENST00000581003 TMEM131LA2VDJ0 1609 aa19.07■□□□□ 0.64
CBX1-206ENST00000581003 SLC52A1Q9NWF4 448 aa19.04■□□□□ 0.64
CBX1-206ENST00000581003 IQSEC2Q5JU85 1478 aa19.03■□□□□ 0.64
CBX1-206ENST00000581003 SPHKAPQ2M3C7 1700 aa19.03■□□□□ 0.64
CBX1-206ENST00000581003 ZFYVE9O95405 1425 aa19.02■□□□□ 0.64
CBX1-206ENST00000581003 CPS1P31327 1500 aa19.01■□□□□ 0.63
CBX1-206ENST00000581003 CHGAP10645 457 aaKnown RBP19.01■□□□□ 0.63
CBX1-206ENST00000581003 EID1Q9Y6B2 187 aa19.01■□□□□ 0.63
CBX1-206ENST00000581003 RIMS2Q9UQ26 1411 aa19■□□□□ 0.63
CBX1-206ENST00000581003 NUTM2DQ5VT03 806 aaPredicted RBP18.99■□□□□ 0.63
CBX1-206ENST00000581003 SLC26A8Q96RN1 970 aa18.99■□□□□ 0.63
CBX1-206ENST00000581003 CLTCL1P53675 1640 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms