RNA–Protein interactions for RNA: ENST00000580074.1

ERBB2-210, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 754 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-210ENST00000580074 ZC3H13Q5T200 1668 aaKnown RBP18.18■□□□□ 0.5
ERBB2-210ENST00000580074 RNF17Q9BXT8 1623 aaKnown RBP18.16■□□□□ 0.5
ERBB2-210ENST00000580074 PTPRKQ15262 1439 aa18.16■□□□□ 0.5
ERBB2-210ENST00000580074 FGD6Q6ZV73 1430 aa18.16■□□□□ 0.5
ERBB2-210ENST00000580074 DUOX2Q9NRD8 1548 aa18.16■□□□□ 0.5
ERBB2-210ENST00000580074 CEP170BQ9Y4F5 1589 aaPredicted RBP18.16■□□□□ 0.5
ERBB2-210ENST00000580074 FBXO41Q8TF61 875 aa18.15■□□□□ 0.5
ERBB2-210ENST00000580074 PTPRTO14522 1441 aa18.15■□□□□ 0.5
ERBB2-210ENST00000580074 DNMT1P26358 1616 aaKnown RBP18.14■□□□□ 0.49
ERBB2-210ENST00000580074 WASHC2CQ9Y4E1 1318 aa18.14■□□□□ 0.49
ERBB2-210ENST00000580074 STRCQ7RTU9 1775 aa18.14■□□□□ 0.49
ERBB2-210ENST00000580074 NCOA1Q15788 1441 aa18.14■□□□□ 0.49
ERBB2-210ENST00000580074 PZPP20742 1482 aa18.14■□□□□ 0.49
ERBB2-210ENST00000580074 TCOF1Q13428 1488 aaKnown RBP18.14■□□□□ 0.49
ERBB2-210ENST00000580074 CAMSAP1Q5T5Y3 1602 aa18.12■□□□□ 0.49
ERBB2-210ENST00000580074 PLA2R1Q13018 1463 aa18.12■□□□□ 0.49
ERBB2-210ENST00000580074 DAPK1P53355 1430 aa18.11■□□□□ 0.49
ERBB2-210ENST00000580074 ERBINQ96RT1 1412 aa18.11■□□□□ 0.49
ERBB2-210ENST00000580074 A2ML1A8K2U0 1454 aa18.1■□□□□ 0.49
ERBB2-210ENST00000580074 KIF15Q9NS87 1388 aa18.1■□□□□ 0.49
ERBB2-210ENST00000580074 TNRQ92752 1358 aa18.09■□□□□ 0.49
ERBB2-210ENST00000580074 ABCC5O15440 1437 aa18.08■□□□□ 0.49
ERBB2-210ENST00000580074 ANKRD30AQ9BXX3 1397 aa18.08■□□□□ 0.49
ERBB2-210ENST00000580074 PKD2Q13563 968 aa18.07■□□□□ 0.48
ERBB2-210ENST00000580074 ABCC3O15438 1527 aa18.07■□□□□ 0.48
ERBB2-210ENST00000580074 NLRP1Q9C000 1473 aa18.07■□□□□ 0.48
ERBB2-210ENST00000580074 KANK1Q14678 1352 aa18.05■□□□□ 0.48
ERBB2-210ENST00000580074 PRDM15P57071 1507 aaPredicted RBP18.05■□□□□ 0.48
ERBB2-210ENST00000580074 CERKQ8TCT0 537 aa18.05■□□□□ 0.48
ERBB2-210ENST00000580074 MROH1Q8NDA8 1641 aa18.03■□□□□ 0.48
ERBB2-210ENST00000580074 CEP152O94986 1710 aa18.02■□□□□ 0.48
ERBB2-210ENST00000580074 POLR1AO95602 1720 aaPredicted RBP18.01■□□□□ 0.47
ERBB2-210ENST00000580074 SPATA31D1Q6ZQQ2 1576 aa18.01■□□□□ 0.47
ERBB2-210ENST00000580074 DEPDC5O75140 1603 aa18.01■□□□□ 0.47
ERBB2-210ENST00000580074 FAM50AQ14320 339 aaKnown RBP18■□□□□ 0.47
ERBB2-210ENST00000580074 ADGRL2O95490 1459 aa18■□□□□ 0.47
ERBB2-210ENST00000580074 IQSEC2Q5JU85 1478 aa18■□□□□ 0.47
ERBB2-210ENST00000580074 UGGT1Q9NYU2 1555 aa18■□□□□ 0.47
ERBB2-210ENST00000580074 RRP7BPQ9NSQ0 103 aa17.99■□□□□ 0.47
ERBB2-210ENST00000580074 THEMISQ8N1K5 641 aaPredicted RBP17.98■□□□□ 0.47
ERBB2-210ENST00000580074 ERVK-7P63135 1459 aa17.98■□□□□ 0.47
ERBB2-210ENST00000580074 FBXO31Q5XUX0 539 aaPredicted RBP17.97■□□□□ 0.47
ERBB2-210ENST00000580074 ARHGAP31Q2M1Z3 1444 aa17.97■□□□□ 0.47
ERBB2-210ENST00000580074 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.96■□□□□ 0.47
ERBB2-210ENST00000580074 NCKAP5LQ9HCH0 1330 aa17.95■□□□□ 0.46
ERBB2-210ENST00000580074 CHIC2Q9UKJ5 165 aa17.94■□□□□ 0.46
ERBB2-210ENST00000580074 ANKLE2Q86XL3 938 aa17.93■□□□□ 0.46
ERBB2-210ENST00000580074 LTBP4Q8N2S1 1624 aa17.93■□□□□ 0.46
ERBB2-210ENST00000580074 LMTK2Q8IWU2 1503 aa17.93■□□□□ 0.46
ERBB2-210ENST00000580074 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.92■□□□□ 0.46
ERBB2-210ENST00000580074 ANKRD50Q9ULJ7 1429 aa17.9■□□□□ 0.46
ERBB2-210ENST00000580074 VWDEQ8N2E2 1590 aa17.9■□□□□ 0.46
ERBB2-210ENST00000580074 NEURL4Q96JN8 1562 aa17.88■□□□□ 0.45
ERBB2-210ENST00000580074 ROCK1Q13464 1354 aa17.88■□□□□ 0.45
ERBB2-210ENST00000580074 CFAP65Q6ZU64 1925 aaKnown RBP17.88■□□□□ 0.45
ERBB2-210ENST00000580074 EFCAB6Q5THR3 1501 aa17.88■□□□□ 0.45
ERBB2-210ENST00000580074 UBR1Q8IWV7 1749 aa17.87■□□□□ 0.45
ERBB2-210ENST00000580074 NPHP4O75161 1426 aaPredicted RBP17.87■□□□□ 0.45
ERBB2-210ENST00000580074 MED14O60244 1454 aa17.87■□□□□ 0.45
ERBB2-210ENST00000580074 CPS1P31327 1500 aa17.87■□□□□ 0.45
ERBB2-210ENST00000580074 IQGAP1P46940 1657 aa17.87■□□□□ 0.45
ERBB2-210ENST00000580074 RPRD2Q5VT52 1461 aaKnown RBP17.86■□□□□ 0.45
ERBB2-210ENST00000580074 KDM5AP29375 1690 aaKnown RBP17.86■□□□□ 0.45
ERBB2-210ENST00000580074 ZNF335Q9H4Z2 1342 aaPredicted RBP17.85■□□□□ 0.45
ERBB2-210ENST00000580074 STAG3Q9UJ98 1225 aa17.84■□□□□ 0.45
ERBB2-210ENST00000580074 TET3O43151 1660 aa17.83■□□□□ 0.45
ERBB2-210ENST00000580074 UNC13BO14795 1591 aa17.83■□□□□ 0.45
ERBB2-210ENST00000580074 GCC2Q8IWJ2 1684 aa17.83■□□□□ 0.44
ERBB2-210ENST00000580074 SCAF11Q99590 1463 aaKnown RBP17.82■□□□□ 0.44
ERBB2-210ENST00000580074 EID1Q9Y6B2 187 aa17.82■□□□□ 0.44
ERBB2-210ENST00000580074 SLIT1O75093 1534 aa17.82■□□□□ 0.44
ERBB2-210ENST00000580074 RRBP1Q9P2E9 1410 aaKnown RBP17.81■□□□□ 0.44
ERBB2-210ENST00000580074 PIK3C2BO00750 1634 aa17.81■□□□□ 0.44
ERBB2-210ENST00000580074 ARHGAP23Q9P227 1491 aa17.79■□□□□ 0.44
ERBB2-210ENST00000580074 SYNMO15061 1565 aa17.79■□□□□ 0.44
ERBB2-210ENST00000580074 NOS1P29475 1434 aa17.78■□□□□ 0.44
ERBB2-210ENST00000580074 ADGRB3O60242 1522 aa17.77■□□□□ 0.44
ERBB2-210ENST00000580074 SLC52A1Q9NWF4 448 aa17.77■□□□□ 0.44
ERBB2-210ENST00000580074 IQGAP3Q86VI3 1631 aa17.76■□□□□ 0.43
ERBB2-210ENST00000580074 TMEM2Q9UHN6 1383 aa17.75■□□□□ 0.43
ERBB2-210ENST00000580074 UBAP1LF5GYI3 381 aa17.74■□□□□ 0.43
ERBB2-210ENST00000580074 ITGAEP38570 1179 aa17.74■□□□□ 0.43
ERBB2-210ENST00000580074 TXNDC2Q86VQ3 553 aa17.74■□□□□ 0.43
ERBB2-210ENST00000580074 TOM1O60784 492 aa17.71■□□□□ 0.43
ERBB2-210ENST00000580074 HDGFP51858 240 aaKnown RBP17.71■□□□□ 0.43
ERBB2-210ENST00000580074 IDI1Q13907 227 aa17.7■□□□□ 0.42
ERBB2-210ENST00000580074 PPARGC1BQ86YN6 1023 aaKnown RBP17.7■□□□□ 0.42
ERBB2-210ENST00000580074 NUP155O75694 1391 aa17.69■□□□□ 0.42
ERBB2-210ENST00000580074 E9PCH4 1651 aa17.69■□□□□ 0.42
ERBB2-210ENST00000580074 PPP1R15AO75807 674 aaPredicted RBP17.65■□□□□ 0.42
ERBB2-210ENST00000580074 LTKP29376 864 aa17.65■□□□□ 0.42
ERBB2-210ENST00000580074 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.64■□□□□ 0.41
ERBB2-210ENST00000580074 SCAF1Q9H7N4 1312 aaKnown RBP17.64■□□□□ 0.41
ERBB2-210ENST00000580074 TMEM131LA2VDJ0 1609 aa17.64■□□□□ 0.41
ERBB2-210ENST00000580074 LRRC7Q96NW7 1537 aa17.63■□□□□ 0.41
ERBB2-210ENST00000580074 SPHKAPQ2M3C7 1700 aa17.62■□□□□ 0.41
ERBB2-210ENST00000580074 BCANQ96GW7 911 aa17.62■□□□□ 0.41
ERBB2-210ENST00000580074 STRCP1A6NGW2 1772 aa17.61■□□□□ 0.41
ERBB2-210ENST00000580074 MYO5BQ9ULV0 1848 aa17.61■□□□□ 0.41
ERBB2-210ENST00000580074 HFM1A2PYH4 1435 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms