RNA–Protein interactions for RNA: ENST00000579618.1

SNRPD1-203, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

TSL 5 BASIC

Gene SNRPD1, Length 320 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-203ENST00000579618 SENP3Q9H4L4 574 aaPredicted RBP16.36■□□□□ 0.21
SNRPD1-203ENST00000579618 RNF17Q9BXT8 1623 aaKnown RBP16.34■□□□□ 0.21
SNRPD1-203ENST00000579618 KIAA1107Q9UPP5 1409 aa16.34■□□□□ 0.21
SNRPD1-203ENST00000579618 TNRQ92752 1358 aa16.33■□□□□ 0.2
SNRPD1-203ENST00000579618 CEP162Q5TB80 1403 aa16.33■□□□□ 0.2
SNRPD1-203ENST00000579618 PLEKHH2Q8IVE3 1493 aa16.33■□□□□ 0.2
SNRPD1-203ENST00000579618 DEPDC5O75140 1603 aa16.33■□□□□ 0.2
SNRPD1-203ENST00000579618 IQGAP1P46940 1657 aa16.32■□□□□ 0.2
SNRPD1-203ENST00000579618 FYCO1Q9BQS8 1478 aa16.32■□□□□ 0.2
SNRPD1-203ENST00000579618 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.32■□□□□ 0.2
SNRPD1-203ENST00000579618 SYNMO15061 1565 aa16.31■□□□□ 0.2
SNRPD1-203ENST00000579618 PZPP20742 1482 aa16.31■□□□□ 0.2
SNRPD1-203ENST00000579618 FBXO31Q5XUX0 539 aaPredicted RBP16.31■□□□□ 0.2
SNRPD1-203ENST00000579618 KDM5DQ9BY66 1539 aa16.3■□□□□ 0.2
SNRPD1-203ENST00000579618 NPHP4O75161 1426 aaPredicted RBP16.3■□□□□ 0.2
SNRPD1-203ENST00000579618 MED14O60244 1454 aa16.29■□□□□ 0.2
SNRPD1-203ENST00000579618 RGS17Q9UGC6 210 aaPredicted RBP16.29■□□□□ 0.2
SNRPD1-203ENST00000579618 UGGT1Q9NYU2 1555 aa16.29■□□□□ 0.2
SNRPD1-203ENST00000579618 LRRC7Q96NW7 1537 aa16.29■□□□□ 0.2
SNRPD1-203ENST00000579618 CFDP1Q9UEE9 299 aaPredicted RBP16.27■□□□□ 0.2
SNRPD1-203ENST00000579618 TIAM1Q13009 1591 aa16.26■□□□□ 0.19
SNRPD1-203ENST00000579618 ANKLE2Q86XL3 938 aa16.26■□□□□ 0.19
SNRPD1-203ENST00000579618 CCNB3Q8WWL7 1395 aa16.26■□□□□ 0.19
SNRPD1-203ENST00000579618 FAM135AQ9P2D6 1515 aa16.25■□□□□ 0.19
SNRPD1-203ENST00000579618 ZC3H13Q5T200 1668 aaKnown RBP16.25■□□□□ 0.19
SNRPD1-203ENST00000579618 NLRP1Q9C000 1473 aa16.25■□□□□ 0.19
SNRPD1-203ENST00000579618 MBD5Q9P267 1494 aa16.25■□□□□ 0.19
SNRPD1-203ENST00000579618 DHX29Q7Z478 1369 aaKnown RBP16.24■□□□□ 0.19
SNRPD1-203ENST00000579618 ZNF644Q9H582 1327 aaPredicted RBP16.23■□□□□ 0.19
SNRPD1-203ENST00000579618 SETD1AO15047 1707 aaKnown RBP16.22■□□□□ 0.19
SNRPD1-203ENST00000579618 XIRP1Q702N8 1843 aaKnown RBP16.22■□□□□ 0.19
SNRPD1-203ENST00000579618 RTEL1-TNFRSF6BF6WH68 1400 aa16.22■□□□□ 0.19
SNRPD1-203ENST00000579618 MIA2Q96PC5 1412 aa16.22■□□□□ 0.19
SNRPD1-203ENST00000579618 THEMISQ8N1K5 641 aaPredicted RBP16.21■□□□□ 0.19
SNRPD1-203ENST00000579618 KIF3BO15066 747 aa16.2■□□□□ 0.18
SNRPD1-203ENST00000579618 POTEAQ6S8J7 498 aa16.17■□□□□ 0.18
SNRPD1-203ENST00000579618 WASHC2CQ9Y4E1 1318 aa16.17■□□□□ 0.18
SNRPD1-203ENST00000579618 UBR1Q8IWV7 1749 aa16.16■□□□□ 0.18
SNRPD1-203ENST00000579618 CCDC141Q6ZP82 1450 aa16.16■□□□□ 0.18
SNRPD1-203ENST00000579618 MTUS2Q5JR59 1369 aa16.15■□□□□ 0.18
SNRPD1-203ENST00000579618 EHBP1L1Q8N3D4 1523 aa16.14■□□□□ 0.18
SNRPD1-203ENST00000579618 ABCC3O15438 1527 aa16.13■□□□□ 0.17
SNRPD1-203ENST00000579618 VPS8Q8N3P4 1428 aa16.12■□□□□ 0.17
SNRPD1-203ENST00000579618 ERVK-7P63135 1459 aa16.12■□□□□ 0.17
SNRPD1-203ENST00000579618 CAMSAP2Q08AD1 1489 aa16.12■□□□□ 0.17
SNRPD1-203ENST00000579618 ROBO1Q9Y6N7 1651 aa16.11■□□□□ 0.17
SNRPD1-203ENST00000579618 CEP152O94986 1710 aa16.11■□□□□ 0.17
SNRPD1-203ENST00000579618 SCAF11Q99590 1463 aaKnown RBP16.11■□□□□ 0.17
SNRPD1-203ENST00000579618 NCOA2Q15596 1464 aa16.1■□□□□ 0.17
SNRPD1-203ENST00000579618 MROH1Q8NDA8 1641 aa16.09■□□□□ 0.17
SNRPD1-203ENST00000579618 FAM135BQ49AJ0 1406 aa16.08■□□□□ 0.16
SNRPD1-203ENST00000579618 ARHGAP23Q9P227 1491 aa16.07■□□□□ 0.16
SNRPD1-203ENST00000579618 SLIT1O75093 1534 aa16.07■□□□□ 0.16
SNRPD1-203ENST00000579618 ARHGEF5Q12774 1597 aa16.06■□□□□ 0.16
SNRPD1-203ENST00000579618 EIF2AK4Q9P2K8 1649 aaKnown RBP16.05■□□□□ 0.16
SNRPD1-203ENST00000579618 MAP3K1Q13233 1512 aa16.05■□□□□ 0.16
SNRPD1-203ENST00000579618 LTKP29376 864 aa16.05■□□□□ 0.16
SNRPD1-203ENST00000579618 CFAP65Q6ZU64 1925 aaKnown RBP16.04■□□□□ 0.16
SNRPD1-203ENST00000579618 PIK3C2BO00750 1634 aa16.02■□□□□ 0.16
SNRPD1-203ENST00000579618 PHLPP1O60346 1717 aa16.02■□□□□ 0.15
SNRPD1-203ENST00000579618 TMEM94Q12767 1356 aa16■□□□□ 0.15
SNRPD1-203ENST00000579618 MAST1Q9Y2H9 1570 aa16■□□□□ 0.15
SNRPD1-203ENST00000579618 TXNDC2Q86VQ3 553 aa15.99■□□□□ 0.15
SNRPD1-203ENST00000579618 LRRC9Q6ZRR7 1453 aa15.98■□□□□ 0.15
SNRPD1-203ENST00000579618 RBM33Q96EV2 1170 aaKnown RBP15.97■□□□□ 0.15
SNRPD1-203ENST00000579618 NWD1Q149M9 1564 aa15.96■□□□□ 0.15
SNRPD1-203ENST00000579618 APLP2Q06481 763 aa15.96■□□□□ 0.15
SNRPD1-203ENST00000579618 RSPH4AQ5TD94 716 aa15.96■□□□□ 0.15
SNRPD1-203ENST00000579618 LRP6O75581 1613 aa15.95■□□□□ 0.14
SNRPD1-203ENST00000579618 COL16A1Q07092 1604 aaPredicted RBP15.95■□□□□ 0.14
SNRPD1-203ENST00000579618 PRDM15P57071 1507 aaPredicted RBP15.94■□□□□ 0.14
SNRPD1-203ENST00000579618 TSPY4P0CV99 314 aa15.94■□□□□ 0.14
SNRPD1-203ENST00000579618 TSPY10P0CW01 314 aa15.94■□□□□ 0.14
SNRPD1-203ENST00000579618 UPF1Q92900 1129 aaKnown RBP eCLIP15.94■□□□□ 0.14
SNRPD1-203ENST00000579618 TET3O43151 1660 aa15.93■□□□□ 0.14
SNRPD1-203ENST00000579618 TMEM2Q9UHN6 1383 aa15.93■□□□□ 0.14
SNRPD1-203ENST00000579618 EID1Q9Y6B2 187 aa15.93■□□□□ 0.14
SNRPD1-203ENST00000579618 KDM5AP29375 1690 aaKnown RBP15.92■□□□□ 0.14
SNRPD1-203ENST00000579618 NKTRP30414 1462 aaKnown RBP15.92■□□□□ 0.14
SNRPD1-203ENST00000579618 JCADQ9P266 1359 aa15.92■□□□□ 0.14
SNRPD1-203ENST00000579618 ARHGAP31Q2M1Z3 1444 aa15.92■□□□□ 0.14
SNRPD1-203ENST00000579618 EFCAB6Q5THR3 1501 aa15.91■□□□□ 0.14
SNRPD1-203ENST00000579618 KCNA6P17658 529 aa15.9■□□□□ 0.14
SNRPD1-203ENST00000579618 PROSER2Q86WR7 435 aaPredicted RBP15.9■□□□□ 0.14
SNRPD1-203ENST00000579618 DUOX2Q9NRD8 1548 aa15.89■□□□□ 0.13
SNRPD1-203ENST00000579618 TRIM52Q96A61 297 aa15.89■□□□□ 0.13
SNRPD1-203ENST00000579618 SLC26A8Q96RN1 970 aa15.89■□□□□ 0.13
SNRPD1-203ENST00000579618 MSH6P52701 1360 aa15.87■□□□□ 0.13
SNRPD1-203ENST00000579618 SHPRHQ149N8 1683 aa15.86■□□□□ 0.13
SNRPD1-203ENST00000579618 ADGRB3O60242 1522 aa15.86■□□□□ 0.13
SNRPD1-203ENST00000579618 CROCC2H7BZ55 1655 aa15.86■□□□□ 0.13
SNRPD1-203ENST00000579618 SLAIN2Q9P270 581 aa15.84■□□□□ 0.13
SNRPD1-203ENST00000579618 STAG3Q9UJ98 1225 aa15.84■□□□□ 0.13
SNRPD1-203ENST00000579618 CHD2O14647 1828 aaKnown RBP15.84■□□□□ 0.13
SNRPD1-203ENST00000579618 FGD6Q6ZV73 1430 aa15.83■□□□□ 0.12
SNRPD1-203ENST00000579618 AHDC1Q5TGY3 1603 aaPredicted RBP15.83■□□□□ 0.12
SNRPD1-203ENST00000579618 MEX3CQ5U5Q3 659 aaKnown RBP15.82■□□□□ 0.12
SNRPD1-203ENST00000579618 ERBINQ96RT1 1412 aa15.82■□□□□ 0.12
SNRPD1-203ENST00000579618 SPATA31A6Q5VVP1 1343 aa15.81■□□□□ 0.12
SNRPD1-203ENST00000579618 ZNF772Q68DY9 489 aaPredicted RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms