RNA–Protein interactions for RNA: ENST00000578397.5

PSMD11-207, Transcript of proteasome 26S subunit, non-ATPase 11, humanhuman

TSL 2

Gene PSMD11, Length 1,178 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11-207ENST00000578397 PTPRKQ15262 1439 aa21.86■■□□□ 1.09
PSMD11-207ENST00000578397 CLTCQ00610 1675 aaKnown RBP21.85■■□□□ 1.09
PSMD11-207ENST00000578397 PTPRTO14522 1441 aa21.82■■□□□ 1.08
PSMD11-207ENST00000578397 CERKQ8TCT0 537 aa21.82■■□□□ 1.08
PSMD11-207ENST00000578397 FAM135AQ9P2D6 1515 aa21.81■■□□□ 1.08
PSMD11-207ENST00000578397 MAST1Q9Y2H9 1570 aa21.81■■□□□ 1.08
PSMD11-207ENST00000578397 STRCQ7RTU9 1775 aa21.81■■□□□ 1.08
PSMD11-207ENST00000578397 NCOA1Q15788 1441 aa21.8■■□□□ 1.08
PSMD11-207ENST00000578397 WASHC2CQ9Y4E1 1318 aa21.8■■□□□ 1.08
PSMD11-207ENST00000578397 KDM5DQ9BY66 1539 aa21.77■■□□□ 1.08
PSMD11-207ENST00000578397 PPP4R3CPQ6ZMV5 832 aa21.75■■□□□ 1.07
PSMD11-207ENST00000578397 CAMSAP1Q5T5Y3 1602 aa21.74■■□□□ 1.07
PSMD11-207ENST00000578397 PZPP20742 1482 aa21.73■■□□□ 1.07
PSMD11-207ENST00000578397 PKD2Q13563 968 aa21.73■■□□□ 1.07
PSMD11-207ENST00000578397 FBXO31Q5XUX0 539 aaPredicted RBP21.73■■□□□ 1.07
PSMD11-207ENST00000578397 MYO3AQ8NEV4 1616 aa21.73■■□□□ 1.07
PSMD11-207ENST00000578397 PLA2R1Q13018 1463 aa21.72■■□□□ 1.07
PSMD11-207ENST00000578397 CEP170BQ9Y4F5 1589 aaPredicted RBP21.72■■□□□ 1.07
PSMD11-207ENST00000578397 TNRQ92752 1358 aa21.72■■□□□ 1.07
PSMD11-207ENST00000578397 ABCC5O15440 1437 aa21.72■■□□□ 1.07
PSMD11-207ENST00000578397 FGD6Q6ZV73 1430 aa21.72■■□□□ 1.07
PSMD11-207ENST00000578397 ZNF142P52746 1687 aaPredicted RBP21.71■■□□□ 1.07
PSMD11-207ENST00000578397 A2ML1A8K2U0 1454 aa21.71■■□□□ 1.07
PSMD11-207ENST00000578397 SHANK2Q9UPX8 1470 aa21.71■■□□□ 1.07
PSMD11-207ENST00000578397 NCKAP5LQ9HCH0 1330 aa21.7■■□□□ 1.06
PSMD11-207ENST00000578397 TCOF1Q13428 1488 aaKnown RBP21.7■■□□□ 1.06
PSMD11-207ENST00000578397 PTPN23Q9H3S7 1636 aa21.69■■□□□ 1.06
PSMD11-207ENST00000578397 DUOX2Q9NRD8 1548 aa21.69■■□□□ 1.06
PSMD11-207ENST00000578397 KIF15Q9NS87 1388 aa21.68■■□□□ 1.06
PSMD11-207ENST00000578397 RNF17Q9BXT8 1623 aaKnown RBP21.68■■□□□ 1.06
PSMD11-207ENST00000578397 EIF2AK4Q9P2K8 1649 aaKnown RBP21.67■■□□□ 1.06
PSMD11-207ENST00000578397 DAPK1P53355 1430 aa21.67■■□□□ 1.06
PSMD11-207ENST00000578397 RRP7BPQ9NSQ0 103 aa21.66■■□□□ 1.06
PSMD11-207ENST00000578397 ABCC3O15438 1527 aa21.65■■□□□ 1.06
PSMD11-207ENST00000578397 NLRP1Q9C000 1473 aa21.64■■□□□ 1.05
PSMD11-207ENST00000578397 ERBINQ96RT1 1412 aa21.63■■□□□ 1.05
PSMD11-207ENST00000578397 DNMT1P26358 1616 aaKnown RBP21.62■■□□□ 1.05
PSMD11-207ENST00000578397 THEMISQ8N1K5 641 aaPredicted RBP21.62■■□□□ 1.05
PSMD11-207ENST00000578397 ANKRD30AQ9BXX3 1397 aa21.61■■□□□ 1.05
PSMD11-207ENST00000578397 LTBP4Q8N2S1 1624 aa21.61■■□□□ 1.05
PSMD11-207ENST00000578397 ZC3H13Q5T200 1668 aaKnown RBP21.6■■□□□ 1.05
PSMD11-207ENST00000578397 CROCC2H7BZ55 1655 aa21.6■■□□□ 1.05
PSMD11-207ENST00000578397 MROH1Q8NDA8 1641 aa21.59■■□□□ 1.05
PSMD11-207ENST00000578397 CHIC2Q9UKJ5 165 aa21.59■■□□□ 1.05
PSMD11-207ENST00000578397 ANKLE2Q86XL3 938 aa21.57■■□□□ 1.04
PSMD11-207ENST00000578397 IQSEC2Q5JU85 1478 aa21.57■■□□□ 1.04
PSMD11-207ENST00000578397 FAM50AQ14320 339 aaKnown RBP21.56■■□□□ 1.04
PSMD11-207ENST00000578397 ERVK-7P63135 1459 aa21.56■■□□□ 1.04
PSMD11-207ENST00000578397 SPATA31D1Q6ZQQ2 1576 aa21.56■■□□□ 1.04
PSMD11-207ENST00000578397 ZNF335Q9H4Z2 1342 aaPredicted RBP21.55■■□□□ 1.04
PSMD11-207ENST00000578397 ARHGAP31Q2M1Z3 1444 aa21.55■■□□□ 1.04
PSMD11-207ENST00000578397 KANK1Q14678 1352 aa21.55■■□□□ 1.04
PSMD11-207ENST00000578397 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.55■■□□□ 1.04
PSMD11-207ENST00000578397 PRDM15P57071 1507 aaPredicted RBP21.55■■□□□ 1.04
PSMD11-207ENST00000578397 UGGT1Q9NYU2 1555 aa21.54■■□□□ 1.04
PSMD11-207ENST00000578397 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.54■■□□□ 1.049e-7■■■■□ 22.1
PSMD11-207ENST00000578397 ADGRL2O95490 1459 aa21.52■■□□□ 1.04
PSMD11-207ENST00000578397 CEP152O94986 1710 aa21.49■■□□□ 1.03
PSMD11-207ENST00000578397 DEPDC5O75140 1603 aa21.48■■□□□ 1.03
PSMD11-207ENST00000578397 NEURL4Q96JN8 1562 aa21.47■■□□□ 1.03
PSMD11-207ENST00000578397 MED14O60244 1454 aa21.46■■□□□ 1.03
PSMD11-207ENST00000578397 LMTK2Q8IWU2 1503 aa21.46■■□□□ 1.03
PSMD11-207ENST00000578397 NPHP4O75161 1426 aaPredicted RBP21.45■■□□□ 1.02
PSMD11-207ENST00000578397 POLR1AO95602 1720 aaPredicted RBP21.44■■□□□ 1.02
PSMD11-207ENST00000578397 ANKRD50Q9ULJ7 1429 aa21.44■■□□□ 1.02
PSMD11-207ENST00000578397 VWDEQ8N2E2 1590 aa21.43■■□□□ 1.02
PSMD11-207ENST00000578397 CPS1P31327 1500 aa21.39■■□□□ 1.02
PSMD11-207ENST00000578397 ROCK1Q13464 1354 aa21.39■■□□□ 1.02
PSMD11-207ENST00000578397 UBAP1LF5GYI3 381 aa21.39■■□□□ 1.01
PSMD11-207ENST00000578397 CFAP65Q6ZU64 1925 aaKnown RBP21.38■■□□□ 1.01
PSMD11-207ENST00000578397 STAG3Q9UJ98 1225 aa21.37■■□□□ 1.01
PSMD11-207ENST00000578397 EID1Q9Y6B2 187 aa21.37■■□□□ 1.01
PSMD11-207ENST00000578397 ARHGAP23Q9P227 1491 aa21.37■■□□□ 1.01
PSMD11-207ENST00000578397 UBR1Q8IWV7 1749 aa21.36■■□□□ 1.01
PSMD11-207ENST00000578397 IDI1Q13907 227 aa21.36■■□□□ 1.01
PSMD11-207ENST00000578397 TXNDC2Q86VQ3 553 aa21.36■■□□□ 1.01
PSMD11-207ENST00000578397 SCAF11Q99590 1463 aaKnown RBP21.36■■□□□ 1.01
PSMD11-207ENST00000578397 NOS1P29475 1434 aa21.36■■□□□ 1.01
PSMD11-207ENST00000578397 SLIT1O75093 1534 aa21.35■■□□□ 1.01
PSMD11-207ENST00000578397 LTKP29376 864 aa21.35■■□□□ 1.01
PSMD11-207ENST00000578397 SLC52A1Q9NWF4 448 aa21.35■■□□□ 1.01
PSMD11-207ENST00000578397 EFCAB6Q5THR3 1501 aa21.34■■□□□ 1.01
PSMD11-207ENST00000578397 PPARGC1BQ86YN6 1023 aaKnown RBP21.33■■□□□ 1.01
PSMD11-207ENST00000578397 IQGAP1P46940 1657 aa21.33■■□□□ 1
PSMD11-207ENST00000578397 TMEM2Q9UHN6 1383 aa21.33■■□□□ 1
PSMD11-207ENST00000578397 RPRD2Q5VT52 1461 aaKnown RBP21.32■■□□□ 1
PSMD11-207ENST00000578397 TOM1O60784 492 aa21.3■■□□□ 1
PSMD11-207ENST00000578397 PIK3C2BO00750 1634 aa21.29■■□□□ 1
PSMD11-207ENST00000578397 SYNMO15061 1565 aa21.29■■□□□ 1
PSMD11-207ENST00000578397 ITGAEP38570 1179 aa21.29■■□□□ 1
PSMD11-207ENST00000578397 KDM5AP29375 1690 aaKnown RBP21.28■■□□□ 1
PSMD11-207ENST00000578397 CNKSR2Q8WXI2 1034 aa21.27■■□□□ 1
PSMD11-207ENST00000578397 UNC13BO14795 1591 aa21.25■□□□□ 0.99
PSMD11-207ENST00000578397 TET3O43151 1660 aa21.24■□□□□ 0.99
PSMD11-207ENST00000578397 ADGRB3O60242 1522 aa21.23■□□□□ 0.99
PSMD11-207ENST00000578397 LRRC7Q96NW7 1537 aa21.22■□□□□ 0.99
PSMD11-207ENST00000578397 NUP155O75694 1391 aa21.22■□□□□ 0.99
PSMD11-207ENST00000578397 RRBP1Q9P2E9 1410 aaKnown RBP21.21■□□□□ 0.99
PSMD11-207ENST00000578397 PIP4K2BP78356 416 aa21.21■□□□□ 0.99
PSMD11-207ENST00000578397 HDGFP51858 240 aaKnown RBP21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms