RNA–Protein interactions for RNA: ENST00000578178.5

PPP4R1-208, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-208ENST00000578178 DUOX2Q9NRD8 1548 aa16.98■□□□□ 0.31
PPP4R1-208ENST00000578178 KIF3BO15066 747 aa16.98■□□□□ 0.31
PPP4R1-208ENST00000578178 HSPA2P54652 639 aa16.97■□□□□ 0.31
PPP4R1-208ENST00000578178 ZC3H13Q5T200 1668 aaKnown RBP16.96■□□□□ 0.31
PPP4R1-208ENST00000578178 MYO3AQ8NEV4 1616 aa16.96■□□□□ 0.3
PPP4R1-208ENST00000578178 KIF15Q9NS87 1388 aa16.95■□□□□ 0.3
PPP4R1-208ENST00000578178 PTPRKQ15262 1439 aa16.95■□□□□ 0.3
PPP4R1-208ENST00000578178 MROH1Q8NDA8 1641 aa16.94■□□□□ 0.3
PPP4R1-208ENST00000578178 ERBINQ96RT1 1412 aa16.94■□□□□ 0.3
PPP4R1-208ENST00000578178 ZNF142P52746 1687 aaPredicted RBP16.94■□□□□ 0.3
PPP4R1-208ENST00000578178 PZPP20742 1482 aa16.92■□□□□ 0.3
PPP4R1-208ENST00000578178 ABCC3O15438 1527 aa16.91■□□□□ 0.3
PPP4R1-208ENST00000578178 PRDM15P57071 1507 aaPredicted RBP16.91■□□□□ 0.3
PPP4R1-208ENST00000578178 ADGRL2O95490 1459 aa16.91■□□□□ 0.3
PPP4R1-208ENST00000578178 ANKRD30AQ9BXX3 1397 aa16.9■□□□□ 0.3
PPP4R1-208ENST00000578178 CEP170BQ9Y4F5 1589 aaPredicted RBP16.89■□□□□ 0.3
PPP4R1-208ENST00000578178 DEPDC5O75140 1603 aa16.89■□□□□ 0.29
PPP4R1-208ENST00000578178 FAM50AQ14320 339 aaKnown RBP16.89■□□□□ 0.29
PPP4R1-208ENST00000578178 CEP152O94986 1710 aa16.89■□□□□ 0.29
PPP4R1-208ENST00000578178 WASHC2CQ9Y4E1 1318 aa16.89■□□□□ 0.29
PPP4R1-208ENST00000578178 STRCQ7RTU9 1775 aa16.89■□□□□ 0.29
PPP4R1-208ENST00000578178 NCOA1Q15788 1441 aa16.87■□□□□ 0.29
PPP4R1-208ENST00000578178 RRP7BPQ9NSQ0 103 aa16.87■□□□□ 0.29
PPP4R1-208ENST00000578178 CAMSAP1Q5T5Y3 1602 aa16.87■□□□□ 0.29
PPP4R1-208ENST00000578178 CHIC2Q9UKJ5 165 aa16.85■□□□□ 0.29
PPP4R1-208ENST00000578178 TNRQ92752 1358 aa16.84■□□□□ 0.29
PPP4R1-208ENST00000578178 A2ML1A8K2U0 1454 aa16.83■□□□□ 0.28
PPP4R1-208ENST00000578178 SPATA31D1Q6ZQQ2 1576 aa16.82■□□□□ 0.28
PPP4R1-208ENST00000578178 PLA2R1Q13018 1463 aa16.82■□□□□ 0.28
PPP4R1-208ENST00000578178 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.81■□□□□ 0.281e-18■■■■□ 20.3
PPP4R1-208ENST00000578178 PPARGC1BQ86YN6 1023 aaKnown RBP16.81■□□□□ 0.28
PPP4R1-208ENST00000578178 VWDEQ8N2E2 1590 aa16.81■□□□□ 0.28
PPP4R1-208ENST00000578178 ERVK-7P63135 1459 aa16.8■□□□□ 0.28
PPP4R1-208ENST00000578178 FBXO31Q5XUX0 539 aaPredicted RBP16.8■□□□□ 0.28
PPP4R1-208ENST00000578178 NLRP1Q9C000 1473 aa16.8■□□□□ 0.28
PPP4R1-208ENST00000578178 LMTK2Q8IWU2 1503 aa16.79■□□□□ 0.28
PPP4R1-208ENST00000578178 PTPRTO14522 1441 aa16.79■□□□□ 0.28
PPP4R1-208ENST00000578178 ANKRD50Q9ULJ7 1429 aa16.79■□□□□ 0.28
PPP4R1-208ENST00000578178 ROCK1Q13464 1354 aa16.78■□□□□ 0.28
PPP4R1-208ENST00000578178 KANK1Q14678 1352 aa16.78■□□□□ 0.28
PPP4R1-208ENST00000578178 DMRT2Q9Y5R5 561 aa16.78■□□□□ 0.28
PPP4R1-208ENST00000578178 ARHGAP31Q2M1Z3 1444 aa16.78■□□□□ 0.28
PPP4R1-208ENST00000578178 RRBP1Q9P2E9 1410 aaKnown RBP16.77■□□□□ 0.27
PPP4R1-208ENST00000578178 UNC13BO14795 1591 aa16.76■□□□□ 0.27
PPP4R1-208ENST00000578178 POLR1AO95602 1720 aaPredicted RBP16.76■□□□□ 0.27
PPP4R1-208ENST00000578178 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.75■□□□□ 0.272e-6■■□□□ 14.2
PPP4R1-208ENST00000578178 UGGT1Q9NYU2 1555 aa16.75■□□□□ 0.27
PPP4R1-208ENST00000578178 EFCAB6Q5THR3 1501 aa16.75■□□□□ 0.27
PPP4R1-208ENST00000578178 CFAP65Q6ZU64 1925 aaKnown RBP16.74■□□□□ 0.27
PPP4R1-208ENST00000578178 PKD2Q13563 968 aa16.71■□□□□ 0.27
PPP4R1-208ENST00000578178 TET3O43151 1660 aa16.71■□□□□ 0.27
PPP4R1-208ENST00000578178 NEURL4Q96JN8 1562 aa16.7■□□□□ 0.26
PPP4R1-208ENST00000578178 ILDR1Q86SU0 546 aaPredicted RBP16.7■□□□□ 0.26
PPP4R1-208ENST00000578178 UBR1Q8IWV7 1749 aa16.7■□□□□ 0.26
PPP4R1-208ENST00000578178 NCKAP5LQ9HCH0 1330 aa16.7■□□□□ 0.26
PPP4R1-208ENST00000578178 GCC2Q8IWJ2 1684 aa16.69■□□□□ 0.26
PPP4R1-208ENST00000578178 ITGAEP38570 1179 aa16.69■□□□□ 0.26
PPP4R1-208ENST00000578178 IQGAP3Q86VI3 1631 aa16.68■□□□□ 0.26
PPP4R1-208ENST00000578178 RPRD2Q5VT52 1461 aaKnown RBP16.67■□□□□ 0.26
PPP4R1-208ENST00000578178 SYNMO15061 1565 aa16.67■□□□□ 0.26
PPP4R1-208ENST00000578178 PIK3C2BO00750 1634 aa16.67■□□□□ 0.26
PPP4R1-208ENST00000578178 THEMISQ8N1K5 641 aaPredicted RBP16.66■□□□□ 0.26
PPP4R1-208ENST00000578178 LTBP4Q8N2S1 1624 aa16.66■□□□□ 0.26
PPP4R1-208ENST00000578178 NOS1P29475 1434 aa16.65■□□□□ 0.26
PPP4R1-208ENST00000578178 KDM5AP29375 1690 aaKnown RBP16.65■□□□□ 0.26
PPP4R1-208ENST00000578178 CERKQ8TCT0 537 aa16.64■□□□□ 0.25
PPP4R1-208ENST00000578178 FBXO41Q8TF61 875 aa16.64■□□□□ 0.25
PPP4R1-208ENST00000578178 E9PCH4 1651 aa16.62■□□□□ 0.25
PPP4R1-208ENST00000578178 IQGAP1P46940 1657 aa16.62■□□□□ 0.25
PPP4R1-208ENST00000578178 MED14O60244 1454 aa16.62■□□□□ 0.25
PPP4R1-208ENST00000578178 ANKLE2Q86XL3 938 aa16.62■□□□□ 0.25
PPP4R1-208ENST00000578178 ADGRB3O60242 1522 aa16.61■□□□□ 0.25
PPP4R1-208ENST00000578178 SLIT1O75093 1534 aa16.61■□□□□ 0.25
PPP4R1-208ENST00000578178 ARHGAP23Q9P227 1491 aa16.61■□□□□ 0.25
PPP4R1-208ENST00000578178 NPHP4O75161 1426 aaPredicted RBP16.6■□□□□ 0.25
PPP4R1-208ENST00000578178 NAIPQ13075 1403 aa16.6■□□□□ 0.25
PPP4R1-208ENST00000578178 SCAF11Q99590 1463 aaKnown RBP16.6■□□□□ 0.25
PPP4R1-208ENST00000578178 IQSEC2Q5JU85 1478 aa16.59■□□□□ 0.25
PPP4R1-208ENST00000578178 ZNF335Q9H4Z2 1342 aaPredicted RBP16.58■□□□□ 0.24
PPP4R1-208ENST00000578178 NUP155O75694 1391 aa16.58■□□□□ 0.24
PPP4R1-208ENST00000578178 HFM1A2PYH4 1435 aa16.57■□□□□ 0.24
PPP4R1-208ENST00000578178 TMEM2Q9UHN6 1383 aa16.55■□□□□ 0.24
PPP4R1-208ENST00000578178 IDI1Q13907 227 aa16.55■□□□□ 0.24
PPP4R1-208ENST00000578178 SLC52A1Q9NWF4 448 aa16.55■□□□□ 0.24
PPP4R1-208ENST00000578178 STAG3Q9UJ98 1225 aa16.55■□□□□ 0.24
PPP4R1-208ENST00000578178 CPS1P31327 1500 aa16.54■□□□□ 0.24
PPP4R1-208ENST00000578178 SPHKAPQ2M3C7 1700 aa16.53■□□□□ 0.24
PPP4R1-208ENST00000578178 MYO5BQ9ULV0 1848 aa16.53■□□□□ 0.24
PPP4R1-208ENST00000578178 TMEM131LA2VDJ0 1609 aa16.52■□□□□ 0.24
PPP4R1-208ENST00000578178 EID1Q9Y6B2 187 aa16.51■□□□□ 0.23
PPP4R1-208ENST00000578178 LTKP29376 864 aa16.5■□□□□ 0.23
PPP4R1-208ENST00000578178 TXNDC2Q86VQ3 553 aa16.5■□□□□ 0.23
PPP4R1-208ENST00000578178 STRCP1A6NGW2 1772 aa16.48■□□□□ 0.23
PPP4R1-208ENST00000578178 ZFYVE9O95405 1425 aa16.47■□□□□ 0.23
PPP4R1-208ENST00000578178 TRPM2O94759 1503 aa16.45■□□□□ 0.22
PPP4R1-208ENST00000578178 RIMS2Q9UQ26 1411 aa16.45■□□□□ 0.22
PPP4R1-208ENST00000578178 CLTCL1P53675 1640 aa16.43■□□□□ 0.22
PPP4R1-208ENST00000578178 PLEKHG1Q9ULL1 1385 aa16.41■□□□□ 0.22
PPP4R1-208ENST00000578178 CHGAP10645 457 aaKnown RBP16.41■□□□□ 0.22
PPP4R1-208ENST00000578178 TRIM52Q96A61 297 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms