RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 PLEKHH2Q8IVE3 1493 aa22.04■■□□□ 1.12
SREBF1-217ENST00000577897 TNRQ92752 1358 aa22.04■■□□□ 1.12
SREBF1-217ENST00000577897 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.03■■□□□ 1.12
SREBF1-217ENST00000577897 CFDP1Q9UEE9 299 aaPredicted RBP22.03■■□□□ 1.12
SREBF1-217ENST00000577897 RGS17Q9UGC6 210 aaPredicted RBP22.03■■□□□ 1.12
SREBF1-217ENST00000577897 KIAA1107Q9UPP5 1409 aa22.03■■□□□ 1.12
SREBF1-217ENST00000577897 FBXO31Q5XUX0 539 aaPredicted RBP22.02■■□□□ 1.12
SREBF1-217ENST00000577897 ANKLE2Q86XL3 938 aa22.02■■□□□ 1.12
SREBF1-217ENST00000577897 NPHP4O75161 1426 aaPredicted RBP21.99■■□□□ 1.11
SREBF1-217ENST00000577897 CCNB3Q8WWL7 1395 aa21.98■■□□□ 1.11
SREBF1-217ENST00000577897 FYCO1Q9BQS8 1478 aa21.97■■□□□ 1.11
SREBF1-217ENST00000577897 PZPP20742 1482 aa21.96■■□□□ 1.11
SREBF1-217ENST00000577897 RNF17Q9BXT8 1623 aaKnown RBP21.95■■□□□ 1.1
SREBF1-217ENST00000577897 UGGT1Q9NYU2 1555 aa21.95■■□□□ 1.1
SREBF1-217ENST00000577897 THEMISQ8N1K5 641 aaPredicted RBP21.94■■□□□ 1.1
SREBF1-217ENST00000577897 KDM5DQ9BY66 1539 aa21.94■■□□□ 1.1
SREBF1-217ENST00000577897 IQGAP1P46940 1657 aa21.94■■□□□ 1.1
SREBF1-217ENST00000577897 DEPDC5O75140 1603 aa21.93■■□□□ 1.1
SREBF1-217ENST00000577897 LRRC7Q96NW7 1537 aa21.93■■□□□ 1.1
SREBF1-217ENST00000577897 FAM135AQ9P2D6 1515 aa21.93■■□□□ 1.1
SREBF1-217ENST00000577897 STRCP1A6NGW2 1772 aa21.92■■□□□ 1.1
SREBF1-217ENST00000577897 MED14O60244 1454 aa21.92■■□□□ 1.1
SREBF1-217ENST00000577897 KIF3BO15066 747 aa21.92■■□□□ 1.1
SREBF1-217ENST00000577897 DHX29Q7Z478 1369 aaKnown RBP21.91■■□□□ 1.1
SREBF1-217ENST00000577897 SYNMO15061 1565 aa21.91■■□□□ 1.1
SREBF1-217ENST00000577897 ZNF644Q9H582 1327 aaPredicted RBP21.9■■□□□ 1.1
SREBF1-217ENST00000577897 NLRP1Q9C000 1473 aa21.9■■□□□ 1.1
SREBF1-217ENST00000577897 WASHC2CQ9Y4E1 1318 aa21.89■■□□□ 1.1
SREBF1-217ENST00000577897 MIA2Q96PC5 1412 aa21.89■■□□□ 1.09
SREBF1-217ENST00000577897 POTEAQ6S8J7 498 aa21.87■■□□□ 1.09
SREBF1-217ENST00000577897 RTEL1-TNFRSF6BF6WH68 1400 aa21.86■■□□□ 1.09
SREBF1-217ENST00000577897 MTUS2Q5JR59 1369 aa21.86■■□□□ 1.09
SREBF1-217ENST00000577897 MBD5Q9P267 1494 aa21.85■■□□□ 1.09
SREBF1-217ENST00000577897 TIAM1Q13009 1591 aa21.84■■□□□ 1.09
SREBF1-217ENST00000577897 ZC3H13Q5T200 1668 aaKnown RBP21.78■■□□□ 1.08
SREBF1-217ENST00000577897 CCDC141Q6ZP82 1450 aa21.77■■□□□ 1.07
SREBF1-217ENST00000577897 SETD1AO15047 1707 aaKnown RBP21.76■■□□□ 1.07
SREBF1-217ENST00000577897 SRCAPQ6ZRS2 3230 aa21.75■■□□□ 1.07
SREBF1-217ENST00000577897 EHBP1L1Q8N3D4 1523 aa21.73■■□□□ 1.07
SREBF1-217ENST00000577897 XIRP1Q702N8 1843 aaKnown RBP21.72■■□□□ 1.07
SREBF1-217ENST00000577897 SCAF11Q99590 1463 aaKnown RBP21.71■■□□□ 1.07
SREBF1-217ENST00000577897 ERVK-7P63135 1459 aa21.71■■□□□ 1.07
SREBF1-217ENST00000577897 CAMSAP2Q08AD1 1489 aa21.71■■□□□ 1.07
SREBF1-217ENST00000577897 ABCC3O15438 1527 aa21.7■■□□□ 1.06
SREBF1-217ENST00000577897 UBR1Q8IWV7 1749 aa21.69■■□□□ 1.06
SREBF1-217ENST00000577897 CEP162Q5TB80 1403 aa21.69■■□□□ 1.06
SREBF1-217ENST00000577897 FAM135BQ49AJ0 1406 aa21.68■■□□□ 1.06
SREBF1-217ENST00000577897 TXNDC2Q86VQ3 553 aa21.66■■□□□ 1.06
SREBF1-217ENST00000577897 LTKP29376 864 aa21.65■■□□□ 1.06
SREBF1-217ENST00000577897 ROBO1Q9Y6N7 1651 aa21.65■■□□□ 1.06
SREBF1-217ENST00000577897 NCOA2Q15596 1464 aa21.64■■□□□ 1.05
SREBF1-217ENST00000577897 RSPH4AQ5TD94 716 aa21.63■■□□□ 1.05
SREBF1-217ENST00000577897 UPF1Q92900 1129 aaKnown RBP eCLIP21.63■■□□□ 1.05
SREBF1-217ENST00000577897 TSPY4P0CV99 314 aa21.62■■□□□ 1.05
SREBF1-217ENST00000577897 TSPY10P0CW01 314 aa21.62■■□□□ 1.05
SREBF1-217ENST00000577897 CEP152O94986 1710 aa21.62■■□□□ 1.05
SREBF1-217ENST00000577897 CFAP65Q6ZU64 1925 aaKnown RBP21.62■■□□□ 1.05
SREBF1-217ENST00000577897 TMEM94Q12767 1356 aa21.61■■□□□ 1.05
SREBF1-217ENST00000577897 SLIT1O75093 1534 aa21.6■■□□□ 1.05
SREBF1-217ENST00000577897 ARHGAP23Q9P227 1491 aa21.6■■□□□ 1.05
SREBF1-217ENST00000577897 ARHGEF5Q12774 1597 aa21.59■■□□□ 1.05
SREBF1-217ENST00000577897 EID1Q9Y6B2 187 aa21.59■■□□□ 1.05
SREBF1-217ENST00000577897 RBM33Q96EV2 1170 aaKnown RBP21.58■■□□□ 1.05
SREBF1-217ENST00000577897 MROH1Q8NDA8 1641 aa21.56■■□□□ 1.04
SREBF1-217ENST00000577897 EIF2AK4Q9P2K8 1649 aaKnown RBP21.56■■□□□ 1.04
SREBF1-217ENST00000577897 TRIM26Q12899 539 aaPredicted RBP21.56■■□□□ 1.04
SREBF1-217ENST00000577897 MAP3K1Q13233 1512 aa21.55■■□□□ 1.04
SREBF1-217ENST00000577897 LRRC9Q6ZRR7 1453 aa21.54■■□□□ 1.04
SREBF1-217ENST00000577897 PROSER2Q86WR7 435 aaPredicted RBP21.54■■□□□ 1.04
SREBF1-217ENST00000577897 PHLPP1O60346 1717 aa21.54■■□□□ 1.04
SREBF1-217ENST00000577897 STAG3Q9UJ98 1225 aa21.52■■□□□ 1.04
SREBF1-217ENST00000577897 PIK3C2BO00750 1634 aa21.51■■□□□ 1.03
SREBF1-217ENST00000577897 JCADQ9P266 1359 aa21.51■■□□□ 1.03
SREBF1-217ENST00000577897 TRIM52Q96A61 297 aa21.51■■□□□ 1.03
SREBF1-217ENST00000577897 MAST1Q9Y2H9 1570 aa21.5■■□□□ 1.03
SREBF1-217ENST00000577897 KCNA6P17658 529 aa21.5■■□□□ 1.03
SREBF1-217ENST00000577897 TMEM2Q9UHN6 1383 aa21.49■■□□□ 1.03
SREBF1-217ENST00000577897 SLC26A8Q96RN1 970 aa21.49■■□□□ 1.03
SREBF1-217ENST00000577897 MSH6P52701 1360 aa21.48■■□□□ 1.03
SREBF1-217ENST00000577897 PRDM15P57071 1507 aaPredicted RBP21.47■■□□□ 1.03
SREBF1-217ENST00000577897 MEX3CQ5U5Q3 659 aaKnown RBP21.47■■□□□ 1.03
SREBF1-217ENST00000577897 PCGF6Q9BYE7 350 aa21.45■■□□□ 1.02
SREBF1-217ENST00000577897 LRP6O75581 1613 aa21.44■■□□□ 1.02
SREBF1-217ENST00000577897 ZNF772Q68DY9 489 aaPredicted RBP21.44■■□□□ 1.02
SREBF1-217ENST00000577897 ARHGAP31Q2M1Z3 1444 aa21.44■■□□□ 1.02
SREBF1-217ENST00000577897 NKTRP30414 1462 aaKnown RBP21.44■■□□□ 1.02
SREBF1-217ENST00000577897 EFCAB6Q5THR3 1501 aa21.44■■□□□ 1.02
SREBF1-217ENST00000577897 SLAIN2Q9P270 581 aa21.43■■□□□ 1.02
SREBF1-217ENST00000577897 COL16A1Q07092 1604 aaPredicted RBP21.42■■□□□ 1.02
SREBF1-217ENST00000577897 NWD1Q149M9 1564 aa21.42■■□□□ 1.02
SREBF1-217ENST00000577897 BCANQ96GW7 911 aa21.42■■□□□ 1.02
SREBF1-217ENST00000577897 DUOX2Q9NRD8 1548 aa21.42■■□□□ 1.02
SREBF1-217ENST00000577897 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.41■■□□□ 1.021e-9■□□□□ 9.8
SREBF1-217ENST00000577897 TET3O43151 1660 aa21.4■■□□□ 1.02
SREBF1-217ENST00000577897 APLP2Q06481 763 aa21.4■■□□□ 1.02
SREBF1-217ENST00000577897 SPATA31A6Q5VVP1 1343 aa21.38■■□□□ 1.01
SREBF1-217ENST00000577897 VPS8Q8N3P4 1428 aa21.38■■□□□ 1.01
SREBF1-217ENST00000577897 KDM5AP29375 1690 aaKnown RBP21.37■■□□□ 1.01
SREBF1-217ENST00000577897 RXRBP28702 533 aa21.36■■□□□ 1.01
SREBF1-217ENST00000577897 IDI1Q13907 227 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms