RNA–Protein interactions for RNA: ENST00000574266.1

ABR-227, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-227ENST00000574266 MYOM3Q5VTT5 1437 aa27.1■■□□□ 1.93
ABR-227ENST00000574266 FAM135AQ9P2D6 1515 aa27.06■■□□□ 1.92
ABR-227ENST00000574266 TNRQ92752 1358 aa27.05■■□□□ 1.92
ABR-227ENST00000574266 KDM5DQ9BY66 1539 aa27.05■■□□□ 1.92
ABR-227ENST00000574266 FBXO31Q5XUX0 539 aaPredicted RBP27.03■■□□□ 1.92
ABR-227ENST00000574266 MYO3AQ8NEV4 1616 aa27.03■■□□□ 1.92
ABR-227ENST00000574266 CEP170BQ9Y4F5 1589 aaPredicted RBP27.03■■□□□ 1.92
ABR-227ENST00000574266 PLA2R1Q13018 1463 aa27.01■■□□□ 1.91
ABR-227ENST00000574266 THEMISQ8N1K5 641 aaPredicted RBP27.01■■□□□ 1.91
ABR-227ENST00000574266 A2ML1A8K2U0 1454 aa27■■□□□ 1.91
ABR-227ENST00000574266 PZPP20742 1482 aa26.99■■□□□ 1.91
ABR-227ENST00000574266 MAST1Q9Y2H9 1570 aa26.98■■□□□ 1.91
ABR-227ENST00000574266 ZNF142P52746 1687 aaPredicted RBP26.98■■□□□ 1.91
ABR-227ENST00000574266 ANKLE2Q86XL3 938 aa26.96■■□□□ 1.91
ABR-227ENST00000574266 RRP7BPQ9NSQ0 103 aa26.95■■□□□ 1.9
ABR-227ENST00000574266 DUOX2Q9NRD8 1548 aa26.92■■□□□ 1.9
ABR-227ENST00000574266 TCOF1Q13428 1488 aaKnown RBP26.9■■□□□ 1.9
ABR-227ENST00000574266 NLRP1Q9C000 1473 aa26.9■■□□□ 1.9
ABR-227ENST00000574266 KIF15Q9NS87 1388 aa26.9■■□□□ 1.9
ABR-227ENST00000574266 DNMT1P26358 1616 aaKnown RBP26.9■■□□□ 1.9
ABR-227ENST00000574266 ZNF335Q9H4Z2 1342 aaPredicted RBP26.9■■□□□ 1.9
ABR-227ENST00000574266 IQSEC2Q5JU85 1478 aa26.89■■□□□ 1.9
ABR-227ENST00000574266 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.89■■□□□ 1.9
ABR-227ENST00000574266 PTPN23Q9H3S7 1636 aa26.89■■□□□ 1.9
ABR-227ENST00000574266 EIF2AK4Q9P2K8 1649 aaKnown RBP26.89■■□□□ 1.9
ABR-227ENST00000574266 KANK1Q14678 1352 aa26.87■■□□□ 1.89
ABR-227ENST00000574266 CHIC2Q9UKJ5 165 aa26.87■■□□□ 1.89
ABR-227ENST00000574266 ABCC5O15440 1437 aa26.87■■□□□ 1.89
ABR-227ENST00000574266 LTBP4Q8N2S1 1624 aa26.87■■□□□ 1.89
ABR-227ENST00000574266 FGD6Q6ZV73 1430 aa26.86■■□□□ 1.89
ABR-227ENST00000574266 RNF17Q9BXT8 1623 aaKnown RBP26.86■■□□□ 1.89
ABR-227ENST00000574266 ANKRD30AQ9BXX3 1397 aa26.85■■□□□ 1.89
ABR-227ENST00000574266 FAM50AQ14320 339 aaKnown RBP26.85■■□□□ 1.89
ABR-227ENST00000574266 SHANK2Q9UPX8 1470 aa26.85■■□□□ 1.89
ABR-227ENST00000574266 ZC3H13Q5T200 1668 aaKnown RBP26.85■■□□□ 1.89
ABR-227ENST00000574266 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.84■■□□□ 1.89
ABR-227ENST00000574266 UBAP1LF5GYI3 381 aa26.84■■□□□ 1.89
ABR-227ENST00000574266 ABCC3O15438 1527 aa26.84■■□□□ 1.89
ABR-227ENST00000574266 DAPK1P53355 1430 aa26.83■■□□□ 1.89
ABR-227ENST00000574266 UGGT1Q9NYU2 1555 aa26.83■■□□□ 1.89
ABR-227ENST00000574266 ERBINQ96RT1 1412 aa26.82■■□□□ 1.88
ABR-227ENST00000574266 STAG3Q9UJ98 1225 aa26.79■■□□□ 1.88
ABR-227ENST00000574266 ERVK-7P63135 1459 aa26.75■■□□□ 1.87
ABR-227ENST00000574266 CROCC2H7BZ55 1655 aa26.74■■□□□ 1.87
ABR-227ENST00000574266 SPATA31D1Q6ZQQ2 1576 aa26.74■■□□□ 1.87
ABR-227ENST00000574266 POLR1AO95602 1720 aaPredicted RBP26.73■■□□□ 1.87
ABR-227ENST00000574266 EID1Q9Y6B2 187 aa26.73■■□□□ 1.87
ABR-227ENST00000574266 NPHP4O75161 1426 aaPredicted RBP26.73■■□□□ 1.87
ABR-227ENST00000574266 TOM1O60784 492 aa26.72■■□□□ 1.87
ABR-227ENST00000574266 CFAP65Q6ZU64 1925 aaKnown RBP26.71■■□□□ 1.87
ABR-227ENST00000574266 CEP152O94986 1710 aa26.7■■□□□ 1.87
ABR-227ENST00000574266 SCAF1Q9H7N4 1312 aaKnown RBP26.7■■□□□ 1.87
ABR-227ENST00000574266 ARHGAP31Q2M1Z3 1444 aa26.7■■□□□ 1.86
ABR-227ENST00000574266 CPS1P31327 1500 aa26.69■■□□□ 1.86
ABR-227ENST00000574266 MROH1Q8NDA8 1641 aa26.68■■□□□ 1.86
ABR-227ENST00000574266 TXNDC2Q86VQ3 553 aa26.68■■□□□ 1.86
ABR-227ENST00000574266 DISP3Q9P2K9 1392 aa26.68■■□□□ 1.86
ABR-227ENST00000574266 PRDM15P57071 1507 aaPredicted RBP26.67■■□□□ 1.86
ABR-227ENST00000574266 MED14O60244 1454 aa26.66■■□□□ 1.86
ABR-227ENST00000574266 DEPDC5O75140 1603 aa26.65■■□□□ 1.86
ABR-227ENST00000574266 NEURL4Q96JN8 1562 aa26.64■■□□□ 1.86
ABR-227ENST00000574266 PIP4K2BP78356 416 aa26.63■■□□□ 1.85
ABR-227ENST00000574266 ANKRD50Q9ULJ7 1429 aa26.59■■□□□ 1.85
ABR-227ENST00000574266 ADGRL2O95490 1459 aa26.59■■□□□ 1.85
ABR-227ENST00000574266 IQGAP1P46940 1657 aa26.59■■□□□ 1.85
ABR-227ENST00000574266 SLC52A1Q9NWF4 448 aa26.58■■□□□ 1.85
ABR-227ENST00000574266 SCAF11Q99590 1463 aaKnown RBP26.57■■□□□ 1.84
ABR-227ENST00000574266 IDI1Q13907 227 aa26.57■■□□□ 1.84
ABR-227ENST00000574266 UBR1Q8IWV7 1749 aa26.56■■□□□ 1.84
ABR-227ENST00000574266 LMTK2Q8IWU2 1503 aa26.55■■□□□ 1.84
ABR-227ENST00000574266 LTKP29376 864 aa26.55■■□□□ 1.84
ABR-227ENST00000574266 HDGFP51858 240 aaKnown RBP26.55■■□□□ 1.84
ABR-227ENST00000574266 BCANQ96GW7 911 aa26.55■■□□□ 1.84
ABR-227ENST00000574266 ITGAEP38570 1179 aa26.53■■□□□ 1.84
ABR-227ENST00000574266 VWDEQ8N2E2 1590 aa26.52■■□□□ 1.84
ABR-227ENST00000574266 TMEM2Q9UHN6 1383 aa26.52■■□□□ 1.84
ABR-227ENST00000574266 SLIT1O75093 1534 aa26.5■■□□□ 1.83
ABR-227ENST00000574266 PPARGC1BQ86YN6 1023 aaKnown RBP26.49■■□□□ 1.83
ABR-227ENST00000574266 ARHGAP23Q9P227 1491 aa26.49■■□□□ 1.83
ABR-227ENST00000574266 EFCAB6Q5THR3 1501 aa26.47■■□□□ 1.83
ABR-227ENST00000574266 PIK3C2BO00750 1634 aa26.47■■□□□ 1.83
ABR-227ENST00000574266 ROCK1Q13464 1354 aa26.46■■□□□ 1.83
ABR-227ENST00000574266 RPRD2Q5VT52 1461 aaKnown RBP26.45■■□□□ 1.82
ABR-227ENST00000574266 HSPA1LP34931 641 aa26.45■■□□□ 1.82
ABR-227ENST00000574266 PPP1R15AO75807 674 aaPredicted RBP26.44■■□□□ 1.82
ABR-227ENST00000574266 CHGAP10645 457 aaKnown RBP26.44■■□□□ 1.82
ABR-227ENST00000574266 NOS1P29475 1434 aa26.44■■□□□ 1.82
ABR-227ENST00000574266 LRRC7Q96NW7 1537 aa26.41■■□□□ 1.82
ABR-227ENST00000574266 KDM5AP29375 1690 aaKnown RBP26.41■■□□□ 1.82
ABR-227ENST00000574266 SLC26A8Q96RN1 970 aa26.39■■□□□ 1.82
ABR-227ENST00000574266 KCNA6P17658 529 aa26.38■■□□□ 1.81
ABR-227ENST00000574266 SYNMO15061 1565 aa26.37■■□□□ 1.81
ABR-227ENST00000574266 NUP155O75694 1391 aa26.37■■□□□ 1.81
ABR-227ENST00000574266 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.37■■□□□ 1.81
ABR-227ENST00000574266 PROSER2Q86WR7 435 aaPredicted RBP26.36■■□□□ 1.81
ABR-227ENST00000574266 ADGRB3O60242 1522 aa26.35■■□□□ 1.81
ABR-227ENST00000574266 TET3O43151 1660 aa26.35■■□□□ 1.81
ABR-227ENST00000574266 ILDR2Q71H61 639 aa26.35■■□□□ 1.81
ABR-227ENST00000574266 SENP3Q9H4L4 574 aaPredicted RBP26.35■■□□□ 1.81
ABR-227ENST00000574266 SOCS7O14512 581 aa26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms