RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-223ENST00000573895 RNF17Q9BXT8 1623 aaKnown RBP22.17■■□□□ 1.14
ABR-223ENST00000573895 KDM5DQ9BY66 1539 aa22.15■■□□□ 1.14
ABR-223ENST00000573895 HSPA2P54652 639 aa22.14■■□□□ 1.13
ABR-223ENST00000573895 PTPRKQ15262 1439 aa22.13■■□□□ 1.13
ABR-223ENST00000573895 KIF15Q9NS87 1388 aa22.12■■□□□ 1.13
ABR-223ENST00000573895 ERBINQ96RT1 1412 aa22.11■■□□□ 1.13
ABR-223ENST00000573895 ZC3H13Q5T200 1668 aaKnown RBP22.11■■□□□ 1.13
ABR-223ENST00000573895 WASHC2CQ9Y4E1 1318 aa22.1■■□□□ 1.13
ABR-223ENST00000573895 ANKRD30AQ9BXX3 1397 aa22.09■■□□□ 1.13
ABR-223ENST00000573895 ADGRL2O95490 1459 aa22.08■■□□□ 1.12
ABR-223ENST00000573895 NCOA1Q15788 1441 aa22.07■■□□□ 1.12
ABR-223ENST00000573895 PZPP20742 1482 aa22.07■■□□□ 1.12
ABR-223ENST00000573895 ZNF142P52746 1687 aaPredicted RBP22.07■■□□□ 1.12
ABR-223ENST00000573895 MROH1Q8NDA8 1641 aa22.06■■□□□ 1.12
ABR-223ENST00000573895 FAM50AQ14320 339 aaKnown RBP22.06■■□□□ 1.12
ABR-223ENST00000573895 RRP7BPQ9NSQ0 103 aa22.06■■□□□ 1.12
ABR-223ENST00000573895 MYO3AQ8NEV4 1616 aa22.06■■□□□ 1.12
ABR-223ENST00000573895 STRCQ7RTU9 1775 aa22.05■■□□□ 1.12
ABR-223ENST00000573895 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.04■■□□□ 1.12
ABR-223ENST00000573895 ABCC3O15438 1527 aa22.04■■□□□ 1.12
ABR-223ENST00000573895 DEPDC5O75140 1603 aa22.03■■□□□ 1.12
ABR-223ENST00000573895 PRDM15P57071 1507 aaPredicted RBP22.03■■□□□ 1.12
ABR-223ENST00000573895 CHIC2Q9UKJ5 165 aa22.02■■□□□ 1.12
ABR-223ENST00000573895 DMRT2Q9Y5R5 561 aa22.02■■□□□ 1.12
ABR-223ENST00000573895 CEP170BQ9Y4F5 1589 aaPredicted RBP22■■□□□ 1.11
ABR-223ENST00000573895 CEP152O94986 1710 aa21.99■■□□□ 1.11
ABR-223ENST00000573895 CAMSAP1Q5T5Y3 1602 aa21.98■■□□□ 1.11
ABR-223ENST00000573895 TNRQ92752 1358 aa21.98■■□□□ 1.11
ABR-223ENST00000573895 A2ML1A8K2U0 1454 aa21.97■■□□□ 1.11
ABR-223ENST00000573895 FBXO31Q5XUX0 539 aaPredicted RBP21.97■■□□□ 1.11
ABR-223ENST00000573895 PLA2R1Q13018 1463 aa21.96■■□□□ 1.11
ABR-223ENST00000573895 ROCK1Q13464 1354 aa21.95■■□□□ 1.1
ABR-223ENST00000573895 KANK1Q14678 1352 aa21.95■■□□□ 1.1
ABR-223ENST00000573895 PTPRTO14522 1441 aa21.95■■□□□ 1.1
ABR-223ENST00000573895 ARHGAP31Q2M1Z3 1444 aa21.95■■□□□ 1.1
ABR-223ENST00000573895 SPATA31D1Q6ZQQ2 1576 aa21.95■■□□□ 1.1
ABR-223ENST00000573895 PPARGC1BQ86YN6 1023 aaKnown RBP21.94■■□□□ 1.1
ABR-223ENST00000573895 NLRP1Q9C000 1473 aa21.94■■□□□ 1.1
ABR-223ENST00000573895 VWDEQ8N2E2 1590 aa21.94■■□□□ 1.1
ABR-223ENST00000573895 ANKRD50Q9ULJ7 1429 aa21.93■■□□□ 1.1
ABR-223ENST00000573895 CFAP65Q6ZU64 1925 aaKnown RBP21.92■■□□□ 1.1
ABR-223ENST00000573895 LMTK2Q8IWU2 1503 aa21.92■■□□□ 1.1
ABR-223ENST00000573895 RRBP1Q9P2E9 1410 aaKnown RBP21.91■■□□□ 1.1
ABR-223ENST00000573895 ERVK-7P63135 1459 aa21.9■■□□□ 1.1
ABR-223ENST00000573895 PKD2Q13563 968 aa21.89■■□□□ 1.09
ABR-223ENST00000573895 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.88■■□□□ 1.09
ABR-223ENST00000573895 THEMISQ8N1K5 641 aaPredicted RBP21.85■■□□□ 1.09
ABR-223ENST00000573895 UGGT1Q9NYU2 1555 aa21.85■■□□□ 1.09
ABR-223ENST00000573895 UNC13BO14795 1591 aa21.83■■□□□ 1.09
ABR-223ENST00000573895 POLR1AO95602 1720 aaPredicted RBP21.83■■□□□ 1.08
ABR-223ENST00000573895 EFCAB6Q5THR3 1501 aa21.82■■□□□ 1.08
ABR-223ENST00000573895 NCKAP5LQ9HCH0 1330 aa21.81■■□□□ 1.08
ABR-223ENST00000573895 ILDR1Q86SU0 546 aaPredicted RBP21.8■■□□□ 1.08
ABR-223ENST00000573895 TET3O43151 1660 aa21.79■■□□□ 1.08
ABR-223ENST00000573895 RPRD2Q5VT52 1461 aaKnown RBP21.79■■□□□ 1.08
ABR-223ENST00000573895 ITGAEP38570 1179 aa21.79■■□□□ 1.08
ABR-223ENST00000573895 UBR1Q8IWV7 1749 aa21.78■■□□□ 1.08
ABR-223ENST00000573895 FBXO41Q8TF61 875 aa21.78■■□□□ 1.08
ABR-223ENST00000573895 GCC2Q8IWJ2 1684 aa21.78■■□□□ 1.08
ABR-223ENST00000573895 KDM5AP29375 1690 aaKnown RBP21.77■■□□□ 1.08
ABR-223ENST00000573895 ANKLE2Q86XL3 938 aa21.77■■□□□ 1.08
ABR-223ENST00000573895 CERKQ8TCT0 537 aa21.77■■□□□ 1.08
ABR-223ENST00000573895 NOS1P29475 1434 aa21.76■■□□□ 1.07
ABR-223ENST00000573895 IQGAP3Q86VI3 1631 aa21.75■■□□□ 1.07
ABR-223ENST00000573895 NEURL4Q96JN8 1562 aa21.74■■□□□ 1.07
ABR-223ENST00000573895 MED14O60244 1454 aa21.74■■□□□ 1.07
ABR-223ENST00000573895 LTBP4Q8N2S1 1624 aa21.73■■□□□ 1.07
ABR-223ENST00000573895 SYNMO15061 1565 aa21.72■■□□□ 1.07
ABR-223ENST00000573895 PIK3C2BO00750 1634 aa21.72■■□□□ 1.07
ABR-223ENST00000573895 SLC52A1Q9NWF4 448 aa21.71■■□□□ 1.07
ABR-223ENST00000573895 SLIT1O75093 1534 aa21.7■■□□□ 1.07
ABR-223ENST00000573895 ARHGAP23Q9P227 1491 aa21.69■■□□□ 1.06
ABR-223ENST00000573895 E9PCH4 1651 aa21.69■■□□□ 1.06
ABR-223ENST00000573895 IDI1Q13907 227 aa21.68■■□□□ 1.06
ABR-223ENST00000573895 NUP155O75694 1391 aa21.68■■□□□ 1.06
ABR-223ENST00000573895 NAIPQ13075 1403 aa21.68■■□□□ 1.06
ABR-223ENST00000573895 IQSEC2Q5JU85 1478 aa21.68■■□□□ 1.06
ABR-223ENST00000573895 IQGAP1P46940 1657 aa21.67■■□□□ 1.06
ABR-223ENST00000573895 NPHP4O75161 1426 aaPredicted RBP21.66■■□□□ 1.06
ABR-223ENST00000573895 HFM1A2PYH4 1435 aa21.65■■□□□ 1.06
ABR-223ENST00000573895 ZNF335Q9H4Z2 1342 aaPredicted RBP21.64■■□□□ 1.05
ABR-223ENST00000573895 TRIM26Q12899 539 aaPredicted RBP21.64■■□□□ 1.05
ABR-223ENST00000573895 STAG3Q9UJ98 1225 aa21.64■■□□□ 1.05
ABR-223ENST00000573895 SCAF11Q99590 1463 aaKnown RBP21.64■■□□□ 1.05
ABR-223ENST00000573895 TMEM2Q9UHN6 1383 aa21.63■■□□□ 1.05
ABR-223ENST00000573895 ADGRB3O60242 1522 aa21.63■■□□□ 1.05
ABR-223ENST00000573895 EID1Q9Y6B2 187 aa21.61■■□□□ 1.05
ABR-223ENST00000573895 LTKP29376 864 aa21.6■■□□□ 1.05
ABR-223ENST00000573895 TXNDC2Q86VQ3 553 aa21.6■■□□□ 1.05
ABR-223ENST00000573895 CPS1P31327 1500 aa21.59■■□□□ 1.05
ABR-223ENST00000573895 TMEM131LA2VDJ0 1609 aa21.57■■□□□ 1.04
ABR-223ENST00000573895 MYO5BQ9ULV0 1848 aa21.57■■□□□ 1.04
ABR-223ENST00000573895 SPHKAPQ2M3C7 1700 aa21.55■■□□□ 1.04
ABR-223ENST00000573895 HDGFP51858 240 aaKnown RBP21.52■■□□□ 1.04
ABR-223ENST00000573895 ZFYVE9O95405 1425 aa21.5■■□□□ 1.03
ABR-223ENST00000573895 ACIN1Q9UKV3 1341 aaKnown RBP21.5■■□□□ 1.03
ABR-223ENST00000573895 STRCP1A6NGW2 1772 aa21.48■■□□□ 1.03
ABR-223ENST00000573895 TRIM52Q96A61 297 aa21.47■■□□□ 1.03
ABR-223ENST00000573895 RIMS2Q9UQ26 1411 aa21.46■■□□□ 1.03
ABR-223ENST00000573895 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms