RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-223ENST00000573895 NISCHQ9Y2I1 1504 aa35.17■■■■□ 3.22
ABR-223ENST00000573895 CCDC180Q9P1Z9 1646 aa31.42■■■□□ 2.62
ABR-223ENST00000573895 ABCC9O60706 1549 aa30.78■■■□□ 2.52
ABR-223ENST00000573895 RB1CC1Q8TDY2 1594 aa29.63■■■□□ 2.33
ABR-223ENST00000573895 NACADO15069 1562 aa29.57■■■□□ 2.32
ABR-223ENST00000573895 MYO15BQ96JP2 1530 aa29.38■■■□□ 2.29
ABR-223ENST00000573895 DCAF8L2P0C7V8 631 aa29.34■■■□□ 2.29
ABR-223ENST00000573895 ZCCHC6Q5VYS8 1495 aaKnown RBP29.25■■■□□ 2.27
ABR-223ENST00000573895 DCAF1Q9Y4B6 1507 aa29.16■■■□□ 2.26
ABR-223ENST00000573895 UNC13AQ9UPW8 1703 aa28.97■■■□□ 2.23
ABR-223ENST00000573895 BICRAQ9NZM4 1560 aa28.71■■■□□ 2.19
ABR-223ENST00000573895 PABPN1Q86U42 306 aaKnown RBP eCLIP28.7■■■□□ 2.18
ABR-223ENST00000573895 SCRIBQ14160 1630 aa28.53■■■□□ 2.16
ABR-223ENST00000573895 SHROOM4Q9ULL8 1493 aa28.49■■■□□ 2.15
ABR-223ENST00000573895 DNAJC5BQ9UF47 199 aa28.43■■■□□ 2.14
ABR-223ENST00000573895 EIF4G1Q04637 1599 aaKnown RBP27.98■■■□□ 2.07
ABR-223ENST00000573895 CC2D2AQ9P2K1 1620 aa27.9■■■□□ 2.06
ABR-223ENST00000573895 CECR2Q9BXF3 1484 aa27.72■■■□□ 2.03
ABR-223ENST00000573895 SMARCA4P51532 1647 aa27.33■■□□□ 1.97
ABR-223ENST00000573895 BAZ1AQ9NRL2 1556 aaPredicted RBP27.29■■□□□ 1.96
ABR-223ENST00000573895 NCAPD3P42695 1498 aa27.27■■□□□ 1.96
ABR-223ENST00000573895 ATAD2BQ9ULI0 1458 aa27.22■■□□□ 1.95
ABR-223ENST00000573895 SMARCA2P51531 1590 aa27.22■■□□□ 1.95
ABR-223ENST00000573895 HMGXB3Q12766 1538 aa27.13■■□□□ 1.93
ABR-223ENST00000573895 PEG3Q9GZU2 1588 aa27.12■■□□□ 1.93
ABR-223ENST00000573895 MROH2BQ7Z745 1585 aa27.06■■□□□ 1.92
ABR-223ENST00000573895 BAZ1BQ9UIG0 1483 aaKnown RBP26.98■■□□□ 1.91
ABR-223ENST00000573895 WIZO95785 1651 aa26.76■■□□□ 1.87
ABR-223ENST00000573895 RSF1Q96T23 1441 aaPredicted RBP26.7■■□□□ 1.86
ABR-223ENST00000573895 LAMC3Q9Y6N6 1575 aa26.59■■□□□ 1.85
ABR-223ENST00000573895 NESP48681 1621 aa26.58■■□□□ 1.85
ABR-223ENST00000573895 ERCC6Q03468 1493 aa26.57■■□□□ 1.84
ABR-223ENST00000573895 TOP2AP11388 1531 aaKnown RBP26.49■■□□□ 1.83
ABR-223ENST00000573895 CADPSQ9ULU8 1353 aa26.45■■□□□ 1.82
ABR-223ENST00000573895 CUX2O14529 1486 aa26.44■■□□□ 1.82
ABR-223ENST00000573895 PDS5BQ9NTI5 1447 aa26.4■■□□□ 1.82
ABR-223ENST00000573895 KIF21AQ7Z4S6 1674 aa26.32■■□□□ 1.8
ABR-223ENST00000573895 THOC2Q8NI27 1593 aaKnown RBP26.29■■□□□ 1.8
ABR-223ENST00000573895 CFTRP13569 1480 aa26.26■■□□□ 1.79
ABR-223ENST00000573895 CCDC88BA6NC98 1476 aa26.17■■□□□ 1.78
ABR-223ENST00000573895 FANCD2Q9BXW9 1451 aa26.11■■□□□ 1.77
ABR-223ENST00000573895 MRC2Q9UBG0 1479 aa26.11■■□□□ 1.77
ABR-223ENST00000573895 CEP164Q9UPV0 1460 aa26.11■■□□□ 1.77
ABR-223ENST00000573895 PRDM2Q13029 1718 aa26.1■■□□□ 1.77
ABR-223ENST00000573895 WDR62O43379 1518 aa26.06■■□□□ 1.76
ABR-223ENST00000573895 URB2Q14146 1524 aaKnown RBP25.86■■□□□ 1.73
ABR-223ENST00000573895 DNAJC5Q9H3Z4 198 aa25.83■■□□□ 1.73
ABR-223ENST00000573895 SUPT5HO00267 1087 aaKnown RBP25.78■■□□□ 1.72
ABR-223ENST00000573895 ABCC8Q09428 1581 aa25.74■■□□□ 1.71
ABR-223ENST00000573895 TOPBP1Q92547 1522 aa25.68■■□□□ 1.7
ABR-223ENST00000573895 DNMBPQ6XZF7 1577 aa25.65■■□□□ 1.7
ABR-223ENST00000573895 IFT140Q96RY7 1462 aa25.6■■□□□ 1.69
ABR-223ENST00000573895 POLA1P09884 1462 aaPredicted RBP25.45■■□□□ 1.66
ABR-223ENST00000573895 TARBP1Q13395 1621 aaKnown RBP25.45■■□□□ 1.66
ABR-223ENST00000573895 ZNF608Q9ULD9 1512 aaPredicted RBP25.43■■□□□ 1.66
ABR-223ENST00000573895 CUX1P39880 1505 aa25.41■■□□□ 1.66
ABR-223ENST00000573895 EIF4G3O43432 1585 aaKnown RBP25.36■■□□□ 1.65
ABR-223ENST00000573895 FGD5Q6ZNL6 1462 aa25.34■■□□□ 1.65
ABR-223ENST00000573895 SOGA1O94964 1423 aa25.34■■□□□ 1.65
ABR-223ENST00000573895 WDR97A6NE52 1622 aa25.3■■□□□ 1.64
ABR-223ENST00000573895 RAD54L2Q9Y4B4 1467 aa25.3■■□□□ 1.64
ABR-223ENST00000573895 OSCARQ8IYS5 282 aa25.28■■□□□ 1.64
ABR-223ENST00000573895 AQRO60306 1485 aaKnown RBP eCLIP25.27■■□□□ 1.64
ABR-223ENST00000573895 BIVM-ERCC5R4GMW8 1640 aa25.19■■□□□ 1.62
ABR-223ENST00000573895 TDRD9Q8NDG6 1382 aaKnown RBP25.18■■□□□ 1.62
ABR-223ENST00000573895 TOP2BQ02880 1626 aa25.18■■□□□ 1.62
ABR-223ENST00000573895 WRNQ14191 1432 aaPredicted RBP eCLIP25.18■■□□□ 1.62
ABR-223ENST00000573895 ABCA10Q8WWZ4 1543 aa25.13■■□□□ 1.61
ABR-223ENST00000573895 SYNJ1O43426 1573 aa25.1■■□□□ 1.61
ABR-223ENST00000573895 CHD1O14646 1710 aa25.09■■□□□ 1.61
ABR-223ENST00000573895 GRIN2BQ13224 1484 aa25.09■■□□□ 1.61
ABR-223ENST00000573895 GAPVD1Q14C86 1478 aa25.06■■□□□ 1.6
ABR-223ENST00000573895 MAGI1Q96QZ7 1491 aaPredicted RBP25.06■■□□□ 1.6
ABR-223ENST00000573895 ABCA5Q8WWZ7 1642 aa25.04■■□□□ 1.6
ABR-223ENST00000573895 SNAPC4Q5SXM2 1469 aa25.03■■□□□ 1.6
ABR-223ENST00000573895 PBRM1Q86U86 1689 aa25.03■■□□□ 1.6
ABR-223ENST00000573895 FBLN2P98095 1184 aa24.97■■□□□ 1.59
ABR-223ENST00000573895 SYNJ2O15056 1496 aa24.95■■□□□ 1.58
ABR-223ENST00000573895 CHMP7Q8WUX9 453 aaPredicted RBP24.92■■□□□ 1.58
ABR-223ENST00000573895 RIMBP3CA6NJZ7 1639 aa24.88■■□□□ 1.57
ABR-223ENST00000573895 RIMBP3BA6NNM3 1639 aa24.88■■□□□ 1.57
ABR-223ENST00000573895 RIMBP3Q9UFD9 1639 aa24.88■■□□□ 1.57
ABR-223ENST00000573895 ARHGEF11O15085 1522 aa24.86■■□□□ 1.57
ABR-223ENST00000573895 ERICH3Q5RHP9 1530 aa24.85■■□□□ 1.57
ABR-223ENST00000573895 CLASP1Q7Z460 1538 aa24.82■■□□□ 1.56
ABR-223ENST00000573895 ADAMTS12P58397 1594 aa24.8■■□□□ 1.56
ABR-223ENST00000573895 TRIM41Q8WV44 630 aa24.78■■□□□ 1.56
ABR-223ENST00000573895 FHAD1B1AJZ9 1412 aa24.77■■□□□ 1.56
ABR-223ENST00000573895 GRIN2AQ12879 1464 aa24.76■■□□□ 1.55
ABR-223ENST00000573895 KIF27Q86VH2 1401 aa24.69■■□□□ 1.54
ABR-223ENST00000573895 NUP160Q12769 1436 aa24.67■■□□□ 1.54
ABR-223ENST00000573895 ARAP1Q96P48 1450 aa24.62■■□□□ 1.53
ABR-223ENST00000573895 CEP170Q5SW79 1584 aa24.62■■□□□ 1.53
ABR-223ENST00000573895 IGF1RP08069 1367 aa24.6■■□□□ 1.53
ABR-223ENST00000573895 CYB5RLQ6IPT4 315 aa24.59■■□□□ 1.53
ABR-223ENST00000573895 CUL7Q14999 1698 aa24.58■■□□□ 1.53
ABR-223ENST00000573895 SHROOM2Q13796 1616 aa24.53■■□□□ 1.52
ABR-223ENST00000573895 CARMIL1Q5VZK9 1371 aa24.44■■□□□ 1.5
ABR-223ENST00000573895 RUSC2Q8N2Y8 1516 aa24.44■■□□□ 1.5
ABR-223ENST00000573895 ERCC6L2Q5T890 1561 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms