RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 ADGRL2O95490 1459 aa13.71□□□□□ -0.21
SMG6-210ENST00000572205 CEP152O94986 1710 aa13.7□□□□□ -0.22
SMG6-210ENST00000572205 MYO3AQ8NEV4 1616 aa13.7□□□□□ -0.22
SMG6-210ENST00000572205 DHX29Q7Z478 1369 aaKnown RBP13.69□□□□□ -0.22
SMG6-210ENST00000572205 KDM5DQ9BY66 1539 aa13.68□□□□□ -0.22
SMG6-210ENST00000572205 DUOX2Q9NRD8 1548 aa13.68□□□□□ -0.22
SMG6-210ENST00000572205 ARID4BQ4LE39 1312 aaPredicted RBP13.67□□□□□ -0.22
SMG6-210ENST00000572205 VWDEQ8N2E2 1590 aa13.67□□□□□ -0.22
SMG6-210ENST00000572205 PTPRKQ15262 1439 aa13.67□□□□□ -0.22
SMG6-210ENST00000572205 STRCQ7RTU9 1775 aa13.66□□□□□ -0.22
SMG6-210ENST00000572205 ABCC3O15438 1527 aa13.66□□□□□ -0.22
SMG6-210ENST00000572205 CAMSAP1Q5T5Y3 1602 aa13.66□□□□□ -0.22
SMG6-210ENST00000572205 CNTLNQ9NXG0 1405 aa13.65□□□□□ -0.22
SMG6-210ENST00000572205 SETD1BQ9UPS6 1966 aaKnown RBP13.64□□□□□ -0.23
SMG6-210ENST00000572205 MLECQ14165 292 aa13.64□□□□□ -0.23
SMG6-210ENST00000572205 RSPH4AQ5TD94 716 aa13.63□□□□□ -0.23
SMG6-210ENST00000572205 ERBINQ96RT1 1412 aa13.63□□□□□ -0.23
SMG6-210ENST00000572205 RRBP1Q9P2E9 1410 aaKnown RBP13.63□□□□□ -0.23
SMG6-210ENST00000572205 UNC13BO14795 1591 aa13.62□□□□□ -0.23
SMG6-210ENST00000572205 NCOA1Q15788 1441 aa13.62□□□□□ -0.23
SMG6-210ENST00000572205 NPATQ14207 1427 aa13.61□□□□□ -0.23
SMG6-210ENST00000572205 PZPP20742 1482 aa13.61□□□□□ -0.23
SMG6-210ENST00000572205 KIF15Q9NS87 1388 aa13.6□□□□□ -0.23
SMG6-210ENST00000572205 GCC2Q8IWJ2 1684 aa13.6□□□□□ -0.23
SMG6-210ENST00000572205 SPATA31D1Q6ZQQ2 1576 aa13.6□□□□□ -0.23
SMG6-210ENST00000572205 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.59□□□□□ -0.23
SMG6-210ENST00000572205 CEP170BQ9Y4F5 1589 aaPredicted RBP13.59□□□□□ -0.23
SMG6-210ENST00000572205 APLP2Q06481 763 aa13.59□□□□□ -0.23
SMG6-210ENST00000572205 LMTK2Q8IWU2 1503 aa13.59□□□□□ -0.23
SMG6-210ENST00000572205 CEBPAP49715 358 aaPredicted RBP13.58□□□□□ -0.24
SMG6-210ENST00000572205 ZMYM3Q14202 1370 aa13.57□□□□□ -0.24
SMG6-210ENST00000572205 EFCAB6Q5THR3 1501 aa13.56□□□□□ -0.24
SMG6-210ENST00000572205 MYT1LQ9UL68 1186 aa13.56□□□□□ -0.24
SMG6-210ENST00000572205 IQGAP3Q86VI3 1631 aa13.54□□□□□ -0.24
SMG6-210ENST00000572205 POLR1AO95602 1720 aaPredicted RBP13.54□□□□□ -0.24
SMG6-210ENST00000572205 UHRF1BP1Q6BDS2 1440 aa13.54□□□□□ -0.24
SMG6-210ENST00000572205 SYNMO15061 1565 aa13.54□□□□□ -0.24
SMG6-210ENST00000572205 TET3O43151 1660 aa13.53□□□□□ -0.24
SMG6-210ENST00000572205 TSPY4P0CV99 314 aa13.53□□□□□ -0.24
SMG6-210ENST00000572205 TSPY10P0CW01 314 aa13.53□□□□□ -0.24
SMG6-210ENST00000572205 FOXD4L1Q9NU39 408 aa13.53□□□□□ -0.24
SMG6-210ENST00000572205 SCAF1Q9H7N4 1312 aaKnown RBP13.53□□□□□ -0.24
SMG6-210ENST00000572205 ROCK1Q13464 1354 aa13.53□□□□□ -0.24
SMG6-210ENST00000572205 ERVK-7P63135 1459 aa13.53□□□□□ -0.24
SMG6-210ENST00000572205 NEURL4Q96JN8 1562 aa13.53□□□□□ -0.24
SMG6-210ENST00000572205 UBR1Q8IWV7 1749 aa13.53□□□□□ -0.24
SMG6-210ENST00000572205 KIF3BO15066 747 aa13.52□□□□□ -0.25
SMG6-210ENST00000572205 E9PCH4 1651 aa13.51□□□□□ -0.25
SMG6-210ENST00000572205 ARHGAP31Q2M1Z3 1444 aa13.51□□□□□ -0.25
SMG6-210ENST00000572205 ANKRD30AQ9BXX3 1397 aa13.51□□□□□ -0.25
SMG6-210ENST00000572205 PPARGC1BQ86YN6 1023 aaKnown RBP13.51□□□□□ -0.25
SMG6-210ENST00000572205 CFAP65Q6ZU64 1925 aaKnown RBP13.51□□□□□ -0.25
SMG6-210ENST00000572205 GGT6Q6P531 493 aa13.5□□□□□ -0.25
SMG6-210ENST00000572205 KDM5AP29375 1690 aaKnown RBP13.5□□□□□ -0.25
SMG6-210ENST00000572205 PIK3C2BO00750 1634 aa13.5□□□□□ -0.25
SMG6-210ENST00000572205 A2ML1A8K2U0 1454 aa13.49□□□□□ -0.25
SMG6-210ENST00000572205 ANKRD50Q9ULJ7 1429 aa13.49□□□□□ -0.25
SMG6-210ENST00000572205 PLA2R1Q13018 1463 aa13.48□□□□□ -0.25
SMG6-210ENST00000572205 HSPA2P54652 639 aa13.48□□□□□ -0.25
SMG6-210ENST00000572205 RRP7BPQ9NSQ0 103 aa13.47□□□□□ -0.25
SMG6-210ENST00000572205 MYO5BQ9ULV0 1848 aa13.47□□□□□ -0.25
SMG6-210ENST00000572205 FAM50AQ14320 339 aaKnown RBP13.46□□□□□ -0.25
SMG6-210ENST00000572205 CHIC2Q9UKJ5 165 aa13.46□□□□□ -0.25
SMG6-210ENST00000572205 NLRP1Q9C000 1473 aa13.45□□□□□ -0.26
SMG6-210ENST00000572205 NOS1P29475 1434 aa13.45□□□□□ -0.26
SMG6-210ENST00000572205 NAIPQ13075 1403 aa13.44□□□□□ -0.26
SMG6-210ENST00000572205 TNRQ92752 1358 aa13.44□□□□□ -0.26
SMG6-210ENST00000572205 FBXO31Q5XUX0 539 aaPredicted RBP13.43□□□□□ -0.26
SMG6-210ENST00000572205 RPRD2Q5VT52 1461 aaKnown RBP13.42□□□□□ -0.26
SMG6-210ENST00000572205 SPHKAPQ2M3C7 1700 aa13.42□□□□□ -0.26
SMG6-210ENST00000572205 UGGT1Q9NYU2 1555 aa13.42□□□□□ -0.26
SMG6-210ENST00000572205 LTBP4Q8N2S1 1624 aa13.42□□□□□ -0.26
SMG6-210ENST00000572205 WASHC2CQ9Y4E1 1318 aa13.41□□□□□ -0.26
SMG6-210ENST00000572205 HFM1A2PYH4 1435 aa13.41□□□□□ -0.26
SMG6-210ENST00000572205 ARHGAP23Q9P227 1491 aa13.41□□□□□ -0.26
SMG6-210ENST00000572205 ADGRB3O60242 1522 aa13.4□□□□□ -0.26
SMG6-210ENST00000572205 SLIT1O75093 1534 aa13.4□□□□□ -0.26
SMG6-210ENST00000572205 PTPRTO14522 1441 aa13.39□□□□□ -0.27
SMG6-210ENST00000572205 TMEM131LA2VDJ0 1609 aa13.39□□□□□ -0.27
SMG6-210ENST00000572205 SLC24A1O60721 1099 aa13.39□□□□□ -0.27
SMG6-210ENST00000572205 ESF1Q9H501 851 aaKnown RBP13.39□□□□□ -0.27
SMG6-210ENST00000572205 IQGAP1P46940 1657 aa13.39□□□□□ -0.27
SMG6-210ENST00000572205 STRCP1A6NGW2 1772 aa13.39□□□□□ -0.27
SMG6-210ENST00000572205 MAPK8IP2Q13387 824 aaPredicted RBP13.38□□□□□ -0.27
SMG6-210ENST00000572205 RTN4Q9NQC3 1192 aaKnown RBP13.38□□□□□ -0.27
SMG6-210ENST00000572205 MED14O60244 1454 aa13.37□□□□□ -0.27
SMG6-210ENST00000572205 CLTCL1P53675 1640 aa13.35□□□□□ -0.27
SMG6-210ENST00000572205 TRPM2O94759 1503 aa13.34□□□□□ -0.27
SMG6-210ENST00000572205 KANK1Q14678 1352 aa13.33□□□□□ -0.27
SMG6-210ENST00000572205 XIRP1Q702N8 1843 aaKnown RBP13.32□□□□□ -0.28
SMG6-210ENST00000572205 ZFYVE9O95405 1425 aa13.3□□□□□ -0.28
SMG6-210ENST00000572205 ITGAEP38570 1179 aa13.3□□□□□ -0.28
SMG6-210ENST00000572205 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.3□□□□□ -0.286e-8■■■■□ 25.6
SMG6-210ENST00000572205 NRXN3Q9Y4C0 1643 aa13.29□□□□□ -0.28
SMG6-210ENST00000572205 SCAF11Q99590 1463 aaKnown RBP13.29□□□□□ -0.28
SMG6-210ENST00000572205 ALKQ9UM73 1620 aa13.28□□□□□ -0.28
SMG6-210ENST00000572205 NCKAP5LQ9HCH0 1330 aa13.28□□□□□ -0.28
SMG6-210ENST00000572205 IFT172Q9UG01 1749 aa13.27□□□□□ -0.28
SMG6-210ENST00000572205 NUP155O75694 1391 aa13.27□□□□□ -0.29
SMG6-210ENST00000572205 NWD1Q149M9 1564 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms