RNA–Protein interactions for RNA: ENST00000568394.1

AC009041.2-204, humanhuman

TSL 1 (best) BASIC

Gene AC009041.2, Length 3,343 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.2-204ENST00000568394 IFT140Q96RY7 1462 aa25.8■■□□□ 1.72
AC009041.2-204ENST00000568394 DISP1Q96F81 1524 aa25.8■■□□□ 1.72
AC009041.2-204ENST00000568394 PTPRGP23470 1445 aa25.8■■□□□ 1.72
AC009041.2-204ENST00000568394 NUTM2DQ5VT03 806 aaPredicted RBP25.8■■□□□ 1.72
AC009041.2-204ENST00000568394 GZF1Q9H116 711 aaPredicted RBP25.8■■□□□ 1.72
AC009041.2-204ENST00000568394 CARMIL2Q6F5E8 1435 aa25.79■■□□□ 1.72
AC009041.2-204ENST00000568394 AFAP1Q8N556 730 aa25.78■■□□□ 1.72
AC009041.2-204ENST00000568394 KIAA0586Q9BVV6 1533 aa25.78■■□□□ 1.72
AC009041.2-204ENST00000568394 RSPH6AQ9H0K4 717 aa25.77■■□□□ 1.72
AC009041.2-204ENST00000568394 SAMD9Q5K651 1589 aa25.77■■□□□ 1.72
AC009041.2-204ENST00000568394 POGKQ9P215 609 aa25.76■■□□□ 1.71
AC009041.2-204ENST00000568394 DENND4BO75064 1496 aaPredicted RBP25.76■■□□□ 1.71
AC009041.2-204ENST00000568394 HECW1Q76N89 1606 aa25.75■■□□□ 1.71
AC009041.2-204ENST00000568394 ADAMTS12P58397 1594 aa25.75■■□□□ 1.71
AC009041.2-204ENST00000568394 ANKRD30BQ9BXX2 1392 aa25.75■■□□□ 1.71
AC009041.2-204ENST00000568394 FAM161AQ3B820 660 aa25.75■■□□□ 1.71
AC009041.2-204ENST00000568394 KIF15Q9NS87 1388 aa25.74■■□□□ 1.71
AC009041.2-204ENST00000568394 ANKRD30AQ9BXX3 1397 aa25.73■■□□□ 1.71
AC009041.2-204ENST00000568394 NLRP13Q86W25 1043 aa25.73■■□□□ 1.71
AC009041.2-204ENST00000568394 RALBP1Q15311 655 aa25.72■■□□□ 1.71
AC009041.2-204ENST00000568394 VSIG10Q8N0Z9 540 aa25.72■■□□□ 1.71
AC009041.2-204ENST00000568394 ANKRD50Q9ULJ7 1429 aa25.71■■□□□ 1.71
AC009041.2-204ENST00000568394 PBRM1Q86U86 1689 aa25.71■■□□□ 1.71
AC009041.2-204ENST00000568394 TROQ12816 1431 aaPredicted RBP25.69■■□□□ 1.7
AC009041.2-204ENST00000568394 WDR62O43379 1518 aa25.69■■□□□ 1.7
AC009041.2-204ENST00000568394 EIF4G3O43432 1585 aaKnown RBP25.68■■□□□ 1.7
AC009041.2-204ENST00000568394 CANXP27824 592 aaKnown RBP25.68■■□□□ 1.7
AC009041.2-204ENST00000568394 TNNT2P45379 298 aaPredicted RBP25.68■■□□□ 1.7
AC009041.2-204ENST00000568394 CAMSAP2Q08AD1 1489 aa25.68■■□□□ 1.7
AC009041.2-204ENST00000568394 PDE3BQ13370 1112 aa25.66■■□□□ 1.7
AC009041.2-204ENST00000568394 FAM43AQ8N2R8 423 aa25.65■■□□□ 1.7
AC009041.2-204ENST00000568394 KTN1Q86UP2 1357 aaKnown RBP25.65■■□□□ 1.7
AC009041.2-204ENST00000568394 GLIPR1L2Q4G1C9 344 aa25.65■■□□□ 1.7
AC009041.2-204ENST00000568394 PKNOX2Q96KN3 472 aa25.65■■□□□ 1.7
AC009041.2-204ENST00000568394 KIF14Q15058 1648 aa25.64■■□□□ 1.7
AC009041.2-204ENST00000568394 GPATCH8Q9UKJ3 1502 aaKnown RBP25.64■■□□□ 1.7
AC009041.2-204ENST00000568394 WDR43Q15061 677 aaKnown RBP eCLIP25.63■■□□□ 1.69
AC009041.2-204ENST00000568394 SPATA31E1Q6ZUB1 1445 aa25.63■■□□□ 1.69
AC009041.2-204ENST00000568394 PLPPR3Q6T4P5 718 aa25.63■■□□□ 1.69
AC009041.2-204ENST00000568394 ROCK2O75116 1388 aaKnown RBP25.63■■□□□ 1.69
AC009041.2-204ENST00000568394 RPRD2Q5VT52 1461 aaKnown RBP25.62■■□□□ 1.69
AC009041.2-204ENST00000568394 BRD4O60885 1362 aaPredicted RBP25.62■■□□□ 1.69
AC009041.2-204ENST00000568394 CENPQQ7L2Z9 268 aaPredicted RBP25.62■■□□□ 1.69
AC009041.2-204ENST00000568394 SAFB2Q14151 953 aaKnown RBP eCLIP25.6■■□□□ 1.69
AC009041.2-204ENST00000568394 MIA2Q96PC5 1412 aa25.6■■□□□ 1.69
AC009041.2-204ENST00000568394 CCDC146Q8IYE0 955 aa25.59■■□□□ 1.69
AC009041.2-204ENST00000568394 RRAGDQ9NQL2 400 aaPredicted RBP25.59■■□□□ 1.69
AC009041.2-204ENST00000568394 KIAA0556O60303 1618 aa25.59■■□□□ 1.69
AC009041.2-204ENST00000568394 C8orf34Q49A92 452 aa25.58■■□□□ 1.69
AC009041.2-204ENST00000568394 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.58■■□□□ 1.69
AC009041.2-204ENST00000568394 C9orf84Q5VXU9 1444 aa25.57■■□□□ 1.68
AC009041.2-204ENST00000568394 ATP10BO94823 1461 aa25.57■■□□□ 1.68
AC009041.2-204ENST00000568394 SYNJ2O15056 1496 aa25.57■■□□□ 1.68
AC009041.2-204ENST00000568394 CEP170Q5SW79 1584 aa25.57■■□□□ 1.68
AC009041.2-204ENST00000568394 PNNQ9H307 717 aaKnown RBP25.57■■□□□ 1.68
AC009041.2-204ENST00000568394 ADAMTS8Q9UP79 889 aa25.56■■□□□ 1.68
AC009041.2-204ENST00000568394 BECN1Q14457 450 aa25.55■■□□□ 1.68
AC009041.2-204ENST00000568394 GGT6Q6P531 493 aa25.55■■□□□ 1.68
AC009041.2-204ENST00000568394 KIF3BO15066 747 aa25.55■■□□□ 1.68
AC009041.2-204ENST00000568394 PANK3Q9H999 370 aa25.55■■□□□ 1.68
AC009041.2-204ENST00000568394 RAPGEF6Q8TEU7 1601 aa25.52■■□□□ 1.68
AC009041.2-204ENST00000568394 TEX14Q8IWB6 1497 aa25.51■■□□□ 1.67
AC009041.2-204ENST00000568394 LRPPRCP42704 1394 aaKnown RBP25.49■■□□□ 1.67
AC009041.2-204ENST00000568394 HSP90AA2PQ14568 343 aaPredicted RBP25.48■■□□□ 1.67
AC009041.2-204ENST00000568394 NEUROD2Q15784 382 aa25.48■■□□□ 1.67
AC009041.2-204ENST00000568394 L1TD1Q5T7N2 865 aaKnown RBP25.48■■□□□ 1.67
AC009041.2-204ENST00000568394 UPF2Q9HAU5 1272 aaKnown RBP25.48■■□□□ 1.67
AC009041.2-204ENST00000568394 HSP90AA1P07900 732 aaKnown RBP25.47■■□□□ 1.67
AC009041.2-204ENST00000568394 MAGI1Q96QZ7 1491 aaPredicted RBP25.47■■□□□ 1.67
AC009041.2-204ENST00000568394 SEC24BO95487 1268 aa25.47■■□□□ 1.67
AC009041.2-204ENST00000568394 KIAA1107Q9UPP5 1409 aa25.47■■□□□ 1.67
AC009041.2-204ENST00000568394 BCAR3O75815 825 aa25.46■■□□□ 1.67
AC009041.2-204ENST00000568394 PZPP20742 1482 aa25.46■■□□□ 1.67
AC009041.2-204ENST00000568394 TCOF1Q13428 1488 aaKnown RBP25.45■■□□□ 1.67
AC009041.2-204ENST00000568394 GOLGA6L3A6NEY3 463 aa25.45■■□□□ 1.66
AC009041.2-204ENST00000568394 PANK2Q9BZ23 570 aa25.45■■□□□ 1.66
AC009041.2-204ENST00000568394 GOLGA2Q08379 1002 aa25.44■■□□□ 1.66
AC009041.2-204ENST00000568394 ZMYND15Q9H091 742 aa25.42■■□□□ 1.66
AC009041.2-204ENST00000568394 COG6Q9Y2V7 657 aa25.42■■□□□ 1.66
AC009041.2-204ENST00000568394 ARHGAP5Q13017 1502 aa25.4■■□□□ 1.66
AC009041.2-204ENST00000568394 CCDC144AA2RUR9 1427 aa25.4■■□□□ 1.66
AC009041.2-204ENST00000568394 EFCAB2Q5VUJ9 269 aa25.4■■□□□ 1.66
AC009041.2-204ENST00000568394 SPAG9O60271 1321 aaKnown RBP25.39■■□□□ 1.66
AC009041.2-204ENST00000568394 KDM2BQ8NHM5 1336 aa25.39■■□□□ 1.65
AC009041.2-204ENST00000568394 KNSTRNQ9Y448 316 aa25.39■■□□□ 1.65
AC009041.2-204ENST00000568394 ERCC6L2Q5T890 1561 aa25.38■■□□□ 1.65
AC009041.2-204ENST00000568394 BCORL1Q5H9F3 1711 aa25.38■■□□□ 1.65
AC009041.2-204ENST00000568394 PLEKHH2Q8IVE3 1493 aa25.37■■□□□ 1.65
AC009041.2-204ENST00000568394 ROCK1Q13464 1354 aa25.37■■□□□ 1.65
AC009041.2-204ENST00000568394 IGHDP01880 384 aa25.37■■□□□ 1.65
AC009041.2-204ENST00000568394 PANK1Q8TE04 598 aa25.37■■□□□ 1.65
AC009041.2-204ENST00000568394 APAF1O14727 1248 aa25.35■■□□□ 1.65
AC009041.2-204ENST00000568394 CLUAP1Q96AJ1 413 aa25.34■■□□□ 1.65
AC009041.2-204ENST00000568394 BCL2L13Q9BXK5 485 aa25.34■■□□□ 1.65
AC009041.2-204ENST00000568394 TMEM132EQ6IEE7 984 aa25.34■■□□□ 1.65
AC009041.2-204ENST00000568394 ARID3AQ99856 593 aa25.34■■□□□ 1.65
AC009041.2-204ENST00000568394 DUSP27Q5VZP5 1158 aa25.33■■□□□ 1.65
AC009041.2-204ENST00000568394 XRCC6P12956 609 aaKnown RBP eCLIP25.32■■□□□ 1.64
AC009041.2-204ENST00000568394 TRIM44Q96DX7 344 aaPredicted RBP25.32■■□□□ 1.64
AC009041.2-204ENST00000568394 MLECQ14165 292 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms