RNA–Protein interactions for RNA: ENST00000568338.1

KLHDC4-220, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-220ENST00000568338 MROH2AA6NES4 1674 aa13.31□□□□□ -0.28
KLHDC4-220ENST00000568338 TOM1O60784 492 aa13.3□□□□□ -0.28
KLHDC4-220ENST00000568338 MYO3AQ8NEV4 1616 aa13.3□□□□□ -0.28
KLHDC4-220ENST00000568338 TROQ12816 1431 aaPredicted RBP13.3□□□□□ -0.28
KLHDC4-220ENST00000568338 TCOF1Q13428 1488 aaKnown RBP13.29□□□□□ -0.28
KLHDC4-220ENST00000568338 ZNF142P52746 1687 aaPredicted RBP13.29□□□□□ -0.28
KLHDC4-220ENST00000568338 ZMYM3Q14202 1370 aa13.29□□□□□ -0.28
KLHDC4-220ENST00000568338 ABCC1P33527 1531 aa13.29□□□□□ -0.28
KLHDC4-220ENST00000568338 CEP170BQ9Y4F5 1589 aaPredicted RBP13.28□□□□□ -0.28
KLHDC4-220ENST00000568338 ATXN8OSP0DMR3 200 aa13.27□□□□□ -0.29
KLHDC4-220ENST00000568338 CPS1P31327 1500 aa13.26□□□□□ -0.29
KLHDC4-220ENST00000568338 LRRC9Q6ZRR7 1453 aa13.26□□□□□ -0.29
KLHDC4-220ENST00000568338 SUPT6HQ7KZ85 1726 aaKnown RBP13.26□□□□□ -0.29
KLHDC4-220ENST00000568338 ITSN2Q9NZM3 1697 aa13.25□□□□□ -0.29
KLHDC4-220ENST00000568338 PREX2Q70Z35 1606 aa13.24□□□□□ -0.29
KLHDC4-220ENST00000568338 EHBP1L1Q8N3D4 1523 aa13.24□□□□□ -0.29
KLHDC4-220ENST00000568338 KIDINS220Q9ULH0 1771 aa13.24□□□□□ -0.29
KLHDC4-220ENST00000568338 CDC42BPBQ9Y5S2 1711 aa13.23□□□□□ -0.29
KLHDC4-220ENST00000568338 PPARGC1BQ86YN6 1023 aaKnown RBP13.23□□□□□ -0.29
KLHDC4-220ENST00000568338 CLTCQ00610 1675 aaKnown RBP13.23□□□□□ -0.29
KLHDC4-220ENST00000568338 PTPRKQ15262 1439 aa13.22□□□□□ -0.29
KLHDC4-220ENST00000568338 POLA2Q14181 598 aa13.22□□□□□ -0.29
KLHDC4-220ENST00000568338 MTUS2Q5JR59 1369 aa13.21□□□□□ -0.29
KLHDC4-220ENST00000568338 KANK4Q5T7N3 995 aaPredicted RBP13.21□□□□□ -0.29
KLHDC4-220ENST00000568338 SHANK2Q9UPX8 1470 aa13.21□□□□□ -0.3
KLHDC4-220ENST00000568338 SAMD9LQ8IVG5 1584 aa13.2□□□□□ -0.3
KLHDC4-220ENST00000568338 SPAG9O60271 1321 aaKnown RBP13.19□□□□□ -0.3
KLHDC4-220ENST00000568338 A2ML1A8K2U0 1454 aa13.19□□□□□ -0.3
KLHDC4-220ENST00000568338 DNMT1P26358 1616 aaKnown RBP13.17□□□□□ -0.3
KLHDC4-220ENST00000568338 GGT6Q6P531 493 aa13.16□□□□□ -0.3
KLHDC4-220ENST00000568338 ZNF777Q9ULD5 760 aaPredicted RBP13.16□□□□□ -0.3
KLHDC4-220ENST00000568338 ATP7AQ04656 1500 aa13.16□□□□□ -0.3
KLHDC4-220ENST00000568338 SYCP2Q9BX26 1530 aa13.16□□□□□ -0.3
KLHDC4-220ENST00000568338 POLR1AO95602 1720 aaPredicted RBP13.16□□□□□ -0.3
KLHDC4-220ENST00000568338 A2MP01023 1474 aa13.16□□□□□ -0.3
KLHDC4-220ENST00000568338 PLXNC1O60486 1568 aa13.15□□□□□ -0.3
KLHDC4-220ENST00000568338 NEURL4Q96JN8 1562 aa13.15□□□□□ -0.3
KLHDC4-220ENST00000568338 NCOA2Q15596 1464 aa13.13□□□□□ -0.31
KLHDC4-220ENST00000568338 TRIM26Q12899 539 aaPredicted RBP13.13□□□□□ -0.31
KLHDC4-220ENST00000568338 VWDEQ8N2E2 1590 aa13.12□□□□□ -0.31
KLHDC4-220ENST00000568338 INO80Q9ULG1 1556 aaPredicted RBP13.12□□□□□ -0.31
KLHDC4-220ENST00000568338 ANKLE2Q86XL3 938 aa13.12□□□□□ -0.31
KLHDC4-220ENST00000568338 CDC42BPAQ5VT25 1732 aa13.12□□□□□ -0.31
KLHDC4-220ENST00000568338 TNRQ92752 1358 aa13.11□□□□□ -0.31
KLHDC4-220ENST00000568338 ALKQ9UM73 1620 aa13.11□□□□□ -0.31
KLHDC4-220ENST00000568338 HNRNPMP52272 730 aaKnown RBP eCLIP13.11□□□□□ -0.31
KLHDC4-220ENST00000568338 PLEKHH2Q8IVE3 1493 aa13.1□□□□□ -0.31
KLHDC4-220ENST00000568338 RNF17Q9BXT8 1623 aaKnown RBP13.1□□□□□ -0.31
KLHDC4-220ENST00000568338 NPHP4O75161 1426 aaPredicted RBP13.09□□□□□ -0.31
KLHDC4-220ENST00000568338 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.08□□□□□ -0.31
KLHDC4-220ENST00000568338 RRBP1Q9P2E9 1410 aaKnown RBP13.08□□□□□ -0.32
KLHDC4-220ENST00000568338 RGS17Q9UGC6 210 aaPredicted RBP13.08□□□□□ -0.32
KLHDC4-220ENST00000568338 SYNMO15061 1565 aa13.07□□□□□ -0.32
KLHDC4-220ENST00000568338 MYOM3Q5VTT5 1437 aa13.07□□□□□ -0.32
KLHDC4-220ENST00000568338 KIAA1107Q9UPP5 1409 aa13.07□□□□□ -0.32
KLHDC4-220ENST00000568338 THEMISQ8N1K5 641 aaPredicted RBP13.07□□□□□ -0.32
KLHDC4-220ENST00000568338 ADGBQ8N7X0 1667 aa13.07□□□□□ -0.32
KLHDC4-220ENST00000568338 MED14O60244 1454 aa13.06□□□□□ -0.32
KLHDC4-220ENST00000568338 LRRC7Q96NW7 1537 aa13.06□□□□□ -0.32
KLHDC4-220ENST00000568338 FAM135AQ9P2D6 1515 aa13.06□□□□□ -0.32
KLHDC4-220ENST00000568338 DEPDC5O75140 1603 aa13.06□□□□□ -0.32
KLHDC4-220ENST00000568338 PZPP20742 1482 aa13.05□□□□□ -0.32
KLHDC4-220ENST00000568338 GPATCH8Q9UKJ3 1502 aaKnown RBP13.05□□□□□ -0.32
KLHDC4-220ENST00000568338 FBXO31Q5XUX0 539 aaPredicted RBP13.05□□□□□ -0.32
KLHDC4-220ENST00000568338 UGGT1Q9NYU2 1555 aa13.05□□□□□ -0.32
KLHDC4-220ENST00000568338 CCNB3Q8WWL7 1395 aa13.05□□□□□ -0.32
KLHDC4-220ENST00000568338 FGD6Q6ZV73 1430 aa13.05□□□□□ -0.32
KLHDC4-220ENST00000568338 NLRP1Q9C000 1473 aa13.04□□□□□ -0.32
KLHDC4-220ENST00000568338 KDM5DQ9BY66 1539 aa13.04□□□□□ -0.32
KLHDC4-220ENST00000568338 CFDP1Q9UEE9 299 aaPredicted RBP13.04□□□□□ -0.32
KLHDC4-220ENST00000568338 IQGAP1P46940 1657 aa13.04□□□□□ -0.32
KLHDC4-220ENST00000568338 PCGF6Q9BYE7 350 aa13.03□□□□□ -0.32
KLHDC4-220ENST00000568338 MIA2Q96PC5 1412 aa13.03□□□□□ -0.32
KLHDC4-220ENST00000568338 PTPN23Q9H3S7 1636 aa13.02□□□□□ -0.33
KLHDC4-220ENST00000568338 POTEAQ6S8J7 498 aa13.01□□□□□ -0.33
KLHDC4-220ENST00000568338 WASHC2CQ9Y4E1 1318 aa13□□□□□ -0.33
KLHDC4-220ENST00000568338 DHX29Q7Z478 1369 aaKnown RBP12.99□□□□□ -0.33
KLHDC4-220ENST00000568338 KIF3BO15066 747 aa12.99□□□□□ -0.33
KLHDC4-220ENST00000568338 RTEL1-TNFRSF6BF6WH68 1400 aa12.98□□□□□ -0.33
KLHDC4-220ENST00000568338 ZBTB12Q9Y330 459 aaPredicted RBP12.98□□□□□ -0.33
KLHDC4-220ENST00000568338 STRCP1A6NGW2 1772 aa12.97□□□□□ -0.33
KLHDC4-220ENST00000568338 FAM50AQ14320 339 aaKnown RBP12.95□□□□□ -0.34
KLHDC4-220ENST00000568338 SETD1AO15047 1707 aaKnown RBP12.95□□□□□ -0.34
KLHDC4-220ENST00000568338 CAMSAP2Q08AD1 1489 aa12.95□□□□□ -0.34
KLHDC4-220ENST00000568338 FAM135BQ49AJ0 1406 aa12.94□□□□□ -0.34
KLHDC4-220ENST00000568338 ZNF644Q9H582 1327 aaPredicted RBP12.92□□□□□ -0.34
KLHDC4-220ENST00000568338 MBD5Q9P267 1494 aa12.92□□□□□ -0.34
KLHDC4-220ENST00000568338 ZC3H13Q5T200 1668 aaKnown RBP12.92□□□□□ -0.34
KLHDC4-220ENST00000568338 SCAF11Q99590 1463 aaKnown RBP12.91□□□□□ -0.34
KLHDC4-220ENST00000568338 CROCC2H7BZ55 1655 aa12.9□□□□□ -0.34
KLHDC4-220ENST00000568338 CCDC141Q6ZP82 1450 aa12.9□□□□□ -0.34
KLHDC4-220ENST00000568338 ARHGEF5Q12774 1597 aa12.89□□□□□ -0.35
KLHDC4-220ENST00000568338 ERVK-7P63135 1459 aa12.88□□□□□ -0.35
KLHDC4-220ENST00000568338 ROBO1Q9Y6N7 1651 aa12.88□□□□□ -0.35
KLHDC4-220ENST00000568338 DAPK1P53355 1430 aa12.88□□□□□ -0.35
KLHDC4-220ENST00000568338 ITGAEP38570 1179 aa12.87□□□□□ -0.35
KLHDC4-220ENST00000568338 TXNDC2Q86VQ3 553 aa12.87□□□□□ -0.35
KLHDC4-220ENST00000568338 RBM42Q9BTD8 480 aaKnown RBP12.87□□□□□ -0.35
KLHDC4-220ENST00000568338 UPF1Q92900 1129 aaKnown RBP eCLIP12.86□□□□□ -0.35
KLHDC4-220ENST00000568338 EID1Q9Y6B2 187 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms