RNA–Protein interactions for RNA: ENST00000568151.1

SPG7-217, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 4

Gene SPG7, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-217ENST00000568151 RNF17Q9BXT8 1623 aaKnown RBP35.24■■■■□ 3.23
SPG7-217ENST00000568151 FAM135AQ9P2D6 1515 aa35.23■■■■□ 3.23
SPG7-217ENST00000568151 KIF15Q9NS87 1388 aa35.23■■■■□ 3.23
SPG7-217ENST00000568151 PTPRKQ15262 1439 aa35.23■■■■□ 3.23
SPG7-217ENST00000568151 KDM5DQ9BY66 1539 aa35.22■■■■□ 3.23
SPG7-217ENST00000568151 FAM50AQ14320 339 aaKnown RBP35.21■■■■□ 3.23
SPG7-217ENST00000568151 PPARGC1BQ86YN6 1023 aaKnown RBP35.2■■■■□ 3.23
SPG7-217ENST00000568151 RRP7BPQ9NSQ0 103 aa35.19■■■■□ 3.22
SPG7-217ENST00000568151 WASHC2CQ9Y4E1 1318 aa35.17■■■■□ 3.22
SPG7-217ENST00000568151 CHIC2Q9UKJ5 165 aa35.17■■■■□ 3.22
SPG7-217ENST00000568151 MROH1Q8NDA8 1641 aa35.16■■■■□ 3.22
SPG7-217ENST00000568151 ANKRD30AQ9BXX3 1397 aa35.13■■■■□ 3.21
SPG7-217ENST00000568151 ERBINQ96RT1 1412 aa35.13■■■■□ 3.21
SPG7-217ENST00000568151 NCOA1Q15788 1441 aa35.12■■■■□ 3.21
SPG7-217ENST00000568151 MYO3AQ8NEV4 1616 aa35.1■■■■□ 3.21
SPG7-217ENST00000568151 ADGRL2O95490 1459 aa35.1■■■■□ 3.21
SPG7-217ENST00000568151 ABCC3O15438 1527 aa35.1■■■■□ 3.21
SPG7-217ENST00000568151 PZPP20742 1482 aa35.09■■■■□ 3.21
SPG7-217ENST00000568151 STRCQ7RTU9 1775 aa35.08■■■■□ 3.21
SPG7-217ENST00000568151 ZC3H13Q5T200 1668 aaKnown RBP35.08■■■■□ 3.21
SPG7-217ENST00000568151 FBXO31Q5XUX0 539 aaPredicted RBP35.06■■■■□ 3.2
SPG7-217ENST00000568151 ZNF142P52746 1687 aaPredicted RBP35.05■■■■□ 3.2
SPG7-217ENST00000568151 PRDM15P57071 1507 aaPredicted RBP35.03■■■■□ 3.2
SPG7-217ENST00000568151 CEP152O94986 1710 aa35.03■■■■□ 3.2
SPG7-217ENST00000568151 DEPDC5O75140 1603 aa35.02■■■■□ 3.2
SPG7-217ENST00000568151 CEP170BQ9Y4F5 1589 aaPredicted RBP35.01■■■■□ 3.2
SPG7-217ENST00000568151 TNRQ92752 1358 aa34.99■■■■□ 3.19
SPG7-217ENST00000568151 CAMSAP1Q5T5Y3 1602 aa34.97■■■■□ 3.19
SPG7-217ENST00000568151 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.95■■■■□ 3.191e-6■□□□□ 9.6
SPG7-217ENST00000568151 A2ML1A8K2U0 1454 aa34.94■■■■□ 3.18
SPG7-217ENST00000568151 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.93■■■■□ 3.181e-10■■■■□ 20.4
SPG7-217ENST00000568151 ANKRD50Q9ULJ7 1429 aa34.9■■■■□ 3.18
SPG7-217ENST00000568151 DMRT2Q9Y5R5 561 aa34.9■■■■□ 3.18
SPG7-217ENST00000568151 SPATA31D1Q6ZQQ2 1576 aa34.9■■■■□ 3.18
SPG7-217ENST00000568151 VWDEQ8N2E2 1590 aa34.88■■■■□ 3.17
SPG7-217ENST00000568151 ERVK-7P63135 1459 aa34.88■■■■□ 3.17
SPG7-217ENST00000568151 ROCK1Q13464 1354 aa34.87■■■■□ 3.17
SPG7-217ENST00000568151 RRBP1Q9P2E9 1410 aaKnown RBP34.87■■■■□ 3.17
SPG7-217ENST00000568151 KANK1Q14678 1352 aa34.87■■■■□ 3.17
SPG7-217ENST00000568151 CFAP65Q6ZU64 1925 aaKnown RBP34.87■■■■□ 3.17
SPG7-217ENST00000568151 PLA2R1Q13018 1463 aa34.86■■■■□ 3.17
SPG7-217ENST00000568151 ARHGAP31Q2M1Z3 1444 aa34.86■■■■□ 3.17
SPG7-217ENST00000568151 PTPRTO14522 1441 aa34.85■■■■□ 3.17
SPG7-217ENST00000568151 ITGAEP38570 1179 aa34.85■■■■□ 3.17
SPG7-217ENST00000568151 NLRP1Q9C000 1473 aa34.84■■■■□ 3.17
SPG7-217ENST00000568151 LMTK2Q8IWU2 1503 aa34.83■■■■□ 3.17
SPG7-217ENST00000568151 NCKAP5LQ9HCH0 1330 aa34.81■■■■□ 3.16
SPG7-217ENST00000568151 ILDR1Q86SU0 546 aaPredicted RBP34.77■■■■□ 3.16
SPG7-217ENST00000568151 PKD2Q13563 968 aa34.75■■■■□ 3.15
SPG7-217ENST00000568151 UGGT1Q9NYU2 1555 aa34.74■■■■□ 3.15
SPG7-217ENST00000568151 UNC13BO14795 1591 aa34.73■■■■□ 3.15
SPG7-217ENST00000568151 EFCAB6Q5THR3 1501 aa34.72■■■■□ 3.15
SPG7-217ENST00000568151 THEMISQ8N1K5 641 aaPredicted RBP34.69■■■■□ 3.14
SPG7-217ENST00000568151 POLR1AO95602 1720 aaPredicted RBP34.67■■■■□ 3.14
SPG7-217ENST00000568151 CERKQ8TCT0 537 aa34.65■■■■□ 3.14
SPG7-217ENST00000568151 NEURL4Q96JN8 1562 aa34.65■■■■□ 3.14
SPG7-217ENST00000568151 UBR1Q8IWV7 1749 aa34.64■■■■□ 3.14
SPG7-217ENST00000568151 TET3O43151 1660 aa34.64■■■■□ 3.14
SPG7-217ENST00000568151 NOS1P29475 1434 aa34.62■■■■□ 3.13
SPG7-217ENST00000568151 SYNMO15061 1565 aa34.61■■■■□ 3.13
SPG7-217ENST00000568151 FBXO41Q8TF61 875 aa34.6■■■■□ 3.13
SPG7-217ENST00000568151 LTBP4Q8N2S1 1624 aa34.59■■■■□ 3.13
SPG7-217ENST00000568151 ANKLE2Q86XL3 938 aa34.59■■■■□ 3.13
SPG7-217ENST00000568151 GCC2Q8IWJ2 1684 aa34.59■■■■□ 3.13
SPG7-217ENST00000568151 IQGAP3Q86VI3 1631 aa34.59■■■■□ 3.13
SPG7-217ENST00000568151 RPRD2Q5VT52 1461 aaKnown RBP34.58■■■■□ 3.13
SPG7-217ENST00000568151 PIK3C2BO00750 1634 aa34.58■■■■□ 3.13
SPG7-217ENST00000568151 NUP155O75694 1391 aa34.53■■■■□ 3.12
SPG7-217ENST00000568151 IDI1Q13907 227 aa34.53■■■■□ 3.12
SPG7-217ENST00000568151 NAIPQ13075 1403 aa34.53■■■■□ 3.12
SPG7-217ENST00000568151 MED14O60244 1454 aa34.52■■■■□ 3.12
SPG7-217ENST00000568151 ZNF335Q9H4Z2 1342 aaPredicted RBP34.52■■■■□ 3.12
SPG7-217ENST00000568151 E9PCH4 1651 aa34.51■■■■□ 3.12
SPG7-217ENST00000568151 NPHP4O75161 1426 aaPredicted RBP34.49■■■■□ 3.11
SPG7-217ENST00000568151 ARHGAP23Q9P227 1491 aa34.49■■■■□ 3.11
SPG7-217ENST00000568151 KDM5AP29375 1690 aaKnown RBP34.49■■■■□ 3.11
SPG7-217ENST00000568151 SLIT1O75093 1534 aa34.49■■■■□ 3.11
SPG7-217ENST00000568151 IQGAP1P46940 1657 aa34.45■■■■□ 3.11
SPG7-217ENST00000568151 SLC52A1Q9NWF4 448 aa34.45■■■■□ 3.11
SPG7-217ENST00000568151 HFM1A2PYH4 1435 aa34.44■■■■□ 3.1
SPG7-217ENST00000568151 STAG3Q9UJ98 1225 aa34.43■■■■□ 3.1
SPG7-217ENST00000568151 SCAF11Q99590 1463 aaKnown RBP34.43■■■■□ 3.1
SPG7-217ENST00000568151 ADGRB3O60242 1522 aa34.42■■■■□ 3.1
SPG7-217ENST00000568151 TMEM2Q9UHN6 1383 aa34.41■■■■□ 3.1
SPG7-217ENST00000568151 LTKP29376 864 aa34.41■■■■□ 3.1
SPG7-217ENST00000568151 TXNDC2Q86VQ3 553 aa34.39■■■■□ 3.1
SPG7-217ENST00000568151 IQSEC2Q5JU85 1478 aa34.35■■■■□ 3.09
SPG7-217ENST00000568151 MYO5BQ9ULV0 1848 aa34.34■■■■□ 3.09
SPG7-217ENST00000568151 EID1Q9Y6B2 187 aa34.33■■■■□ 3.09
SPG7-217ENST00000568151 TMEM131LA2VDJ0 1609 aa34.31■■■■□ 3.08
SPG7-217ENST00000568151 CPS1P31327 1500 aa34.27■■■■□ 3.08
SPG7-217ENST00000568151 SPHKAPQ2M3C7 1700 aa34.27■■■■□ 3.08
SPG7-217ENST00000568151 STRCP1A6NGW2 1772 aa34.23■■■■□ 3.07
SPG7-217ENST00000568151 TRIM52Q96A61 297 aa34.23■■■■□ 3.07
SPG7-217ENST00000568151 ZFYVE9O95405 1425 aa34.22■■■■□ 3.07
SPG7-217ENST00000568151 CHGAP10645 457 aaKnown RBP34.2■■■■□ 3.07
SPG7-217ENST00000568151 RIMS2Q9UQ26 1411 aa34.19■■■■□ 3.06
SPG7-217ENST00000568151 TRPM2O94759 1503 aa34.14■■■■□ 3.06
SPG7-217ENST00000568151 SLC4A1APQ9BWU0 796 aaKnown RBP34.11■■■■□ 3.05
SPG7-217ENST00000568151 CLTCL1P53675 1640 aa34.11■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms