RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 KDM5DQ9BY66 1539 aa12.71□□□□□ -0.38
HDGFL3-205ENST00000568129 ADGRL2O95490 1459 aa12.71□□□□□ -0.38
HDGFL3-205ENST00000568129 PTPRKQ15262 1439 aa12.71□□□□□ -0.38
HDGFL3-205ENST00000568129 NCOA1Q15788 1441 aa12.71□□□□□ -0.38
HDGFL3-205ENST00000568129 MROH1Q8NDA8 1641 aa12.7□□□□□ -0.38
HDGFL3-205ENST00000568129 STRCQ7RTU9 1775 aa12.69□□□□□ -0.38
HDGFL3-205ENST00000568129 ZC3H13Q5T200 1668 aaKnown RBP12.69□□□□□ -0.38
HDGFL3-205ENST00000568129 ERBINQ96RT1 1412 aa12.69□□□□□ -0.38
HDGFL3-205ENST00000568129 DEPDC5O75140 1603 aa12.69□□□□□ -0.38
HDGFL3-205ENST00000568129 KIF15Q9NS87 1388 aa12.68□□□□□ -0.38
HDGFL3-205ENST00000568129 ZNF142P52746 1687 aaPredicted RBP12.67□□□□□ -0.38
HDGFL3-205ENST00000568129 UHRF1BP1Q6BDS2 1440 aa12.67□□□□□ -0.38
HDGFL3-205ENST00000568129 ANKRD30AQ9BXX3 1397 aa12.67□□□□□ -0.38
HDGFL3-205ENST00000568129 PZPP20742 1482 aa12.66□□□□□ -0.38
HDGFL3-205ENST00000568129 ABCC3O15438 1527 aa12.66□□□□□ -0.38
HDGFL3-205ENST00000568129 PRDM15P57071 1507 aaPredicted RBP12.65□□□□□ -0.38
HDGFL3-205ENST00000568129 VWDEQ8N2E2 1590 aa12.64□□□□□ -0.39
HDGFL3-205ENST00000568129 WASHC2CQ9Y4E1 1318 aa12.64□□□□□ -0.39
HDGFL3-205ENST00000568129 CFAP65Q6ZU64 1925 aaKnown RBP12.64□□□□□ -0.39
HDGFL3-205ENST00000568129 MYO3AQ8NEV4 1616 aa12.64□□□□□ -0.39
HDGFL3-205ENST00000568129 HSPA2P54652 639 aa12.64□□□□□ -0.39
HDGFL3-205ENST00000568129 PLPPR3Q6T4P5 718 aa12.64□□□□□ -0.39
HDGFL3-205ENST00000568129 RRP7BPQ9NSQ0 103 aa12.64□□□□□ -0.39
HDGFL3-205ENST00000568129 CEP152O94986 1710 aa12.63□□□□□ -0.39
HDGFL3-205ENST00000568129 ROCK1Q13464 1354 aa12.63□□□□□ -0.39
HDGFL3-205ENST00000568129 ARHGAP31Q2M1Z3 1444 aa12.62□□□□□ -0.39
HDGFL3-205ENST00000568129 RRBP1Q9P2E9 1410 aaKnown RBP12.62□□□□□ -0.39
HDGFL3-205ENST00000568129 CAMSAP1Q5T5Y3 1602 aa12.62□□□□□ -0.39
HDGFL3-205ENST00000568129 LMTK2Q8IWU2 1503 aa12.62□□□□□ -0.39
HDGFL3-205ENST00000568129 SPATA31D1Q6ZQQ2 1576 aa12.61□□□□□ -0.39
HDGFL3-205ENST00000568129 FAM50AQ14320 339 aaKnown RBP12.61□□□□□ -0.39
HDGFL3-205ENST00000568129 CHIC2Q9UKJ5 165 aa12.61□□□□□ -0.39
HDGFL3-205ENST00000568129 CEP170BQ9Y4F5 1589 aaPredicted RBP12.6□□□□□ -0.39
HDGFL3-205ENST00000568129 A2ML1A8K2U0 1454 aa12.59□□□□□ -0.39
HDGFL3-205ENST00000568129 PLA2R1Q13018 1463 aa12.59□□□□□ -0.39
HDGFL3-205ENST00000568129 FBXO31Q5XUX0 539 aaPredicted RBP12.59□□□□□ -0.39
HDGFL3-205ENST00000568129 ANKRD50Q9ULJ7 1429 aa12.59□□□□□ -0.39
HDGFL3-205ENST00000568129 TNRQ92752 1358 aa12.58□□□□□ -0.4
HDGFL3-205ENST00000568129 PTPRTO14522 1441 aa12.58□□□□□ -0.4
HDGFL3-205ENST00000568129 DMRT2Q9Y5R5 561 aa12.58□□□□□ -0.4
HDGFL3-205ENST00000568129 NLRP1Q9C000 1473 aa12.58□□□□□ -0.4
HDGFL3-205ENST00000568129 PPARGC1BQ86YN6 1023 aaKnown RBP12.57□□□□□ -0.4
HDGFL3-205ENST00000568129 ERVK-7P63135 1459 aa12.57□□□□□ -0.4
HDGFL3-205ENST00000568129 UNC13BO14795 1591 aa12.56□□□□□ -0.4
HDGFL3-205ENST00000568129 KANK1Q14678 1352 aa12.55□□□□□ -0.4
HDGFL3-205ENST00000568129 KDM5AP29375 1690 aaKnown RBP12.54□□□□□ -0.4
HDGFL3-205ENST00000568129 PKD2Q13563 968 aa12.54□□□□□ -0.4
HDGFL3-205ENST00000568129 TET3O43151 1660 aa12.53□□□□□ -0.4
HDGFL3-205ENST00000568129 GCC2Q8IWJ2 1684 aa12.53□□□□□ -0.4
HDGFL3-205ENST00000568129 POLR1AO95602 1720 aaPredicted RBP12.53□□□□□ -0.4
HDGFL3-205ENST00000568129 EFCAB6Q5THR3 1501 aa12.52□□□□□ -0.4
HDGFL3-205ENST00000568129 UBR1Q8IWV7 1749 aa12.52□□□□□ -0.41
HDGFL3-205ENST00000568129 NOS1P29475 1434 aa12.52□□□□□ -0.41
HDGFL3-205ENST00000568129 RPRD2Q5VT52 1461 aaKnown RBP12.52□□□□□ -0.41
HDGFL3-205ENST00000568129 IQGAP3Q86VI3 1631 aa12.51□□□□□ -0.41
HDGFL3-205ENST00000568129 THEMISQ8N1K5 641 aaPredicted RBP12.51□□□□□ -0.41
HDGFL3-205ENST00000568129 UGGT1Q9NYU2 1555 aa12.51□□□□□ -0.41
HDGFL3-205ENST00000568129 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.5□□□□□ -0.41
HDGFL3-205ENST00000568129 NEURL4Q96JN8 1562 aa12.49□□□□□ -0.41
HDGFL3-205ENST00000568129 MED14O60244 1454 aa12.49□□□□□ -0.41
HDGFL3-205ENST00000568129 E9PCH4 1651 aa12.48□□□□□ -0.41
HDGFL3-205ENST00000568129 LTBP4Q8N2S1 1624 aa12.48□□□□□ -0.41
HDGFL3-205ENST00000568129 SYNMO15061 1565 aa12.48□□□□□ -0.41
HDGFL3-205ENST00000568129 NAIPQ13075 1403 aa12.48□□□□□ -0.41
HDGFL3-205ENST00000568129 NCKAP5LQ9HCH0 1330 aa12.48□□□□□ -0.41
HDGFL3-205ENST00000568129 SLIT1O75093 1534 aa12.47□□□□□ -0.41
HDGFL3-205ENST00000568129 ARHGAP23Q9P227 1491 aa12.47□□□□□ -0.41
HDGFL3-205ENST00000568129 PIK3C2BO00750 1634 aa12.47□□□□□ -0.41
HDGFL3-205ENST00000568129 SLC52A1Q9NWF4 448 aa12.46□□□□□ -0.41
HDGFL3-205ENST00000568129 HFM1A2PYH4 1435 aa12.45□□□□□ -0.42
HDGFL3-205ENST00000568129 IDI1Q13907 227 aa12.45□□□□□ -0.42
HDGFL3-205ENST00000568129 ANKLE2Q86XL3 938 aa12.45□□□□□ -0.42
HDGFL3-205ENST00000568129 ITGAEP38570 1179 aa12.44□□□□□ -0.42
HDGFL3-205ENST00000568129 ILDR1Q86SU0 546 aaPredicted RBP12.44□□□□□ -0.42
HDGFL3-205ENST00000568129 CERKQ8TCT0 537 aa12.44□□□□□ -0.42
HDGFL3-205ENST00000568129 MYO5BQ9ULV0 1848 aa12.44□□□□□ -0.42
HDGFL3-205ENST00000568129 IQSEC2Q5JU85 1478 aa12.43□□□□□ -0.42
HDGFL3-205ENST00000568129 FBXO41Q8TF61 875 aa12.43□□□□□ -0.42
HDGFL3-205ENST00000568129 NUP155O75694 1391 aa12.43□□□□□ -0.42
HDGFL3-205ENST00000568129 IQGAP1P46940 1657 aa12.42□□□□□ -0.42
HDGFL3-205ENST00000568129 TMEM131LA2VDJ0 1609 aa12.41□□□□□ -0.42
HDGFL3-205ENST00000568129 NPHP4O75161 1426 aaPredicted RBP12.4□□□□□ -0.42
HDGFL3-205ENST00000568129 LTKP29376 864 aa12.4□□□□□ -0.42
HDGFL3-205ENST00000568129 ADGRB3O60242 1522 aa12.4□□□□□ -0.42
HDGFL3-205ENST00000568129 TMEM2Q9UHN6 1383 aa12.4□□□□□ -0.42
HDGFL3-205ENST00000568129 SCAF11Q99590 1463 aaKnown RBP12.4□□□□□ -0.43
HDGFL3-205ENST00000568129 SPHKAPQ2M3C7 1700 aa12.4□□□□□ -0.43
HDGFL3-205ENST00000568129 STRCP1A6NGW2 1772 aa12.38□□□□□ -0.43
HDGFL3-205ENST00000568129 ZFYVE9O95405 1425 aa12.37□□□□□ -0.43
HDGFL3-205ENST00000568129 ZNF335Q9H4Z2 1342 aaPredicted RBP12.37□□□□□ -0.43
HDGFL3-205ENST00000568129 TXNDC2Q86VQ3 553 aa12.36□□□□□ -0.43
HDGFL3-205ENST00000568129 CPS1P31327 1500 aa12.36□□□□□ -0.43
HDGFL3-205ENST00000568129 ACIN1Q9UKV3 1341 aaKnown RBP12.36□□□□□ -0.43
HDGFL3-205ENST00000568129 EID1Q9Y6B2 187 aa12.34□□□□□ -0.43
HDGFL3-205ENST00000568129 KIF1BO60333 1816 aa12.32□□□□□ -0.44
HDGFL3-205ENST00000568129 TRPM2O94759 1503 aa12.32□□□□□ -0.44
HDGFL3-205ENST00000568129 STAG3Q9UJ98 1225 aa12.32□□□□□ -0.44
HDGFL3-205ENST00000568129 HDGFP51858 240 aaKnown RBP12.31□□□□□ -0.44
HDGFL3-205ENST00000568129 CHD2O14647 1828 aaKnown RBP12.31□□□□□ -0.44
HDGFL3-205ENST00000568129 XIRP1Q702N8 1843 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms