RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 UNC13BO14795 1591 aa7.62□□□□□ -1.19
LINC01541-202ENST00000568095 ARHGAP5Q13017 1502 aa7.61□□□□□ -1.19
LINC01541-202ENST00000568095 ARID3CA6NKF2 412 aa7.61□□□□□ -1.19
LINC01541-202ENST00000568095 DEPDC5O75140 1603 aa7.61□□□□□ -1.19
LINC01541-202ENST00000568095 RICTORQ6R327 1708 aa7.61□□□□□ -1.19
LINC01541-202ENST00000568095 CCDC141Q6ZP82 1450 aa7.61□□□□□ -1.19
LINC01541-202ENST00000568095 PLEKHD1A6NEE1 506 aa7.61□□□□□ -1.19
LINC01541-202ENST00000568095 ZNF644Q9H582 1327 aaPredicted RBP7.6□□□□□ -1.19
LINC01541-202ENST00000568095 NCOA1Q15788 1441 aa7.6□□□□□ -1.19
LINC01541-202ENST00000568095 MAGI2Q86UL8 1455 aa7.6□□□□□ -1.19
LINC01541-202ENST00000568095 PLEKHH2Q8IVE3 1493 aa7.6□□□□□ -1.19
LINC01541-202ENST00000568095 FRMPD1Q5SYB0 1578 aa7.6□□□□□ -1.19
LINC01541-202ENST00000568095 KIDINS220Q9ULH0 1771 aa7.6□□□□□ -1.19
LINC01541-202ENST00000568095 ITGAEP38570 1179 aa7.58□□□□□ -1.2
LINC01541-202ENST00000568095 DDX10Q13206 875 aaKnown RBP7.58□□□□□ -1.2
LINC01541-202ENST00000568095 C9orf84Q5VXU9 1444 aa7.58□□□□□ -1.2
LINC01541-202ENST00000568095 EIF2AK4Q9P2K8 1649 aaKnown RBP7.58□□□□□ -1.2
LINC01541-202ENST00000568095 DCAF8L1A6NGE4 600 aa7.58□□□□□ -1.2
LINC01541-202ENST00000568095 IQGAP3Q86VI3 1631 aa7.57□□□□□ -1.2
LINC01541-202ENST00000568095 MROH1Q8NDA8 1641 aa7.57□□□□□ -1.2
LINC01541-202ENST00000568095 FANCAO15360 1455 aa7.56□□□□□ -1.2
LINC01541-202ENST00000568095 PZPP20742 1482 aa7.56□□□□□ -1.2
LINC01541-202ENST00000568095 DEKP35659 375 aaKnown RBP7.56□□□□□ -1.2
LINC01541-202ENST00000568095 FAM50AQ14320 339 aaKnown RBP7.56□□□□□ -1.2
LINC01541-202ENST00000568095 VWDEQ8N2E2 1590 aa7.56□□□□□ -1.2
LINC01541-202ENST00000568095 RTEL1-TNFRSF6BF6WH68 1400 aa7.56□□□□□ -1.2
LINC01541-202ENST00000568095 ZMYM4Q5VZL5 1548 aa7.56□□□□□ -1.2
LINC01541-202ENST00000568095 RNF17Q9BXT8 1623 aaKnown RBP7.55□□□□□ -1.2
LINC01541-202ENST00000568095 NEO1Q92859 1461 aa7.55□□□□□ -1.2
LINC01541-202ENST00000568095 TRAPPC8Q9Y2L5 1435 aa7.55□□□□□ -1.2
LINC01541-202ENST00000568095 CFDP1Q9UEE9 299 aaPredicted RBP7.55□□□□□ -1.2
LINC01541-202ENST00000568095 ANP32CO43423 234 aa7.55□□□□□ -1.2
LINC01541-202ENST00000568095 PLEKHG5O94827 1062 aa7.55□□□□□ -1.2
LINC01541-202ENST00000568095 ATP7AQ04656 1500 aa7.55□□□□□ -1.2
LINC01541-202ENST00000568095 DUOX2Q9NRD8 1548 aa7.55□□□□□ -1.2
LINC01541-202ENST00000568095 ABCA6Q8N139 1617 aa7.55□□□□□ -1.2
LINC01541-202ENST00000568095 CACNB1Q02641 598 aaPredicted RBP7.54□□□□□ -1.2
LINC01541-202ENST00000568095 TRIM52Q96A61 297 aa7.54□□□□□ -1.2
LINC01541-202ENST00000568095 HECW2Q9P2P5 1572 aa7.54□□□□□ -1.2
LINC01541-202ENST00000568095 EIF5BO60841 1220 aaKnown RBP7.54□□□□□ -1.2
LINC01541-202ENST00000568095 TMEM132AQ24JP5 1023 aa7.54□□□□□ -1.2
LINC01541-202ENST00000568095 POGZQ7Z3K3 1410 aa7.53□□□□□ -1.2
LINC01541-202ENST00000568095 ERBINQ96RT1 1412 aa7.53□□□□□ -1.2
LINC01541-202ENST00000568095 PRDM15P57071 1507 aaPredicted RBP7.53□□□□□ -1.2
LINC01541-202ENST00000568095 PPP4R2Q9NY27 417 aa7.53□□□□□ -1.2
LINC01541-202ENST00000568095 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.52□□□□□ -1.21
LINC01541-202ENST00000568095 ADGRL1O94910 1474 aa7.52□□□□□ -1.21
LINC01541-202ENST00000568095 SIGLEC1Q9BZZ2 1709 aa7.52□□□□□ -1.21
LINC01541-202ENST00000568095 REREQ9P2R6 1566 aa7.52□□□□□ -1.21
LINC01541-202ENST00000568095 DIP2CQ9Y2E4 1556 aa7.51□□□□□ -1.21
LINC01541-202ENST00000568095 CD109Q6YHK3 1445 aa7.51□□□□□ -1.21
LINC01541-202ENST00000568095 ZNF518AQ6AHZ1 1483 aa7.51□□□□□ -1.21
LINC01541-202ENST00000568095 MLH3Q9UHC1 1453 aa7.51□□□□□ -1.21
LINC01541-202ENST00000568095 C14orf37Q86TY3 774 aa7.51□□□□□ -1.21
LINC01541-202ENST00000568095 RSPH4AQ5TD94 716 aa7.51□□□□□ -1.21
LINC01541-202ENST00000568095 SIN3AQ96ST3 1273 aa7.51□□□□□ -1.21
LINC01541-202ENST00000568095 ANKRD30AQ9BXX3 1397 aa7.51□□□□□ -1.21
LINC01541-202ENST00000568095 ANKRD50Q9ULJ7 1429 aa7.5□□□□□ -1.21
LINC01541-202ENST00000568095 E9PCH4 1651 aa7.5□□□□□ -1.21
LINC01541-202ENST00000568095 TSPOAP1O95153 1857 aa7.5□□□□□ -1.21
LINC01541-202ENST00000568095 KIF15Q9NS87 1388 aa7.49□□□□□ -1.21
LINC01541-202ENST00000568095 FAM135AQ9P2D6 1515 aa7.49□□□□□ -1.21
LINC01541-202ENST00000568095 TET3O43151 1660 aa7.49□□□□□ -1.21
LINC01541-202ENST00000568095 FBXO3Q9UK99 471 aa7.49□□□□□ -1.21
LINC01541-202ENST00000568095 HNRNPMP52272 730 aaKnown RBP eCLIP7.48□□□□□ -1.21
LINC01541-202ENST00000568095 NOP58Q9Y2X3 529 aaKnown RBP7.48□□□□□ -1.21
LINC01541-202ENST00000568095 LMTK2Q8IWU2 1503 aa7.48□□□□□ -1.21
LINC01541-202ENST00000568095 EFCAB2Q5VUJ9 269 aa7.47□□□□□ -1.21
LINC01541-202ENST00000568095 ATP10AO60312 1499 aa7.47□□□□□ -1.21
LINC01541-202ENST00000568095 TEX14Q8IWB6 1497 aa7.47□□□□□ -1.21
LINC01541-202ENST00000568095 SCAPERQ9BY12 1400 aa7.47□□□□□ -1.21
LINC01541-202ENST00000568095 POLR1AO95602 1720 aaPredicted RBP7.47□□□□□ -1.21
LINC01541-202ENST00000568095 SPHKAPQ2M3C7 1700 aa7.47□□□□□ -1.21
LINC01541-202ENST00000568095 ZC3H13Q5T200 1668 aaKnown RBP7.47□□□□□ -1.21
LINC01541-202ENST00000568095 NEURL4Q96JN8 1562 aa7.47□□□□□ -1.21
LINC01541-202ENST00000568095 CEP152O94986 1710 aa7.47□□□□□ -1.21
LINC01541-202ENST00000568095 RRP7BPQ9NSQ0 103 aa7.47□□□□□ -1.21
LINC01541-202ENST00000568095 ANKRD30BQ9BXX2 1392 aa7.46□□□□□ -1.21
LINC01541-202ENST00000568095 MYCNP04198 464 aaPredicted RBP7.46□□□□□ -1.21
LINC01541-202ENST00000568095 PAXIP1Q6ZW49 1069 aaPredicted RBP7.46□□□□□ -1.21
LINC01541-202ENST00000568095 PODXL2Q9NZ53 605 aa7.46□□□□□ -1.21
LINC01541-202ENST00000568095 CYB5RLQ6IPT4 315 aa7.46□□□□□ -1.22
LINC01541-202ENST00000568095 BBXQ8WY36 941 aaPredicted RBP7.46□□□□□ -1.22
LINC01541-202ENST00000568095 ANO8Q9HCE9 1232 aaPredicted RBP7.46□□□□□ -1.22
LINC01541-202ENST00000568095 CHIC2Q9UKJ5 165 aa7.46□□□□□ -1.22
LINC01541-202ENST00000568095 ARHGEF40Q8TER5 1519 aa7.46□□□□□ -1.22
LINC01541-202ENST00000568095 RPRD2Q5VT52 1461 aaKnown RBP7.46□□□□□ -1.22
LINC01541-202ENST00000568095 PAK3O75914 559 aaPredicted RBP7.45□□□□□ -1.22
LINC01541-202ENST00000568095 NBR1Q14596 966 aa7.45□□□□□ -1.22
LINC01541-202ENST00000568095 RNF123Q5XPI4 1314 aa7.45□□□□□ -1.22
LINC01541-202ENST00000568095 WASHC2AQ641Q2 1341 aa7.45□□□□□ -1.22
LINC01541-202ENST00000568095 HNRNPUQ00839 825 aaKnown RBP eCLIP7.45□□□□□ -1.22
LINC01541-202ENST00000568095 KLHL34Q8N239 644 aa7.45□□□□□ -1.22
LINC01541-202ENST00000568095 IFT172Q9UG01 1749 aa7.45□□□□□ -1.22
LINC01541-202ENST00000568095 EFCAB6Q5THR3 1501 aa7.44□□□□□ -1.22
LINC01541-202ENST00000568095 CFAP44Q96MT7 982 aa7.44□□□□□ -1.22
LINC01541-202ENST00000568095 PLA2R1Q13018 1463 aa7.44□□□□□ -1.22
LINC01541-202ENST00000568095 ZBED9Q6R2W3 1325 aa7.44□□□□□ -1.22
LINC01541-202ENST00000568095 ZNF777Q9ULD5 760 aaPredicted RBP7.44□□□□□ -1.22
LINC01541-202ENST00000568095 HOXD11P31277 338 aaPredicted RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms