RNA–Protein interactions for RNA: ENST00000567806.1

GTF3C1-207, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 4

Gene GTF3C1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-207ENST00000567806 KANK4Q5T7N3 995 aaPredicted RBP29.7■■■□□ 2.35
GTF3C1-207ENST00000567806 ZNF142P52746 1687 aaPredicted RBP29.69■■■□□ 2.34
GTF3C1-207ENST00000567806 ARHGEF5Q12774 1597 aa29.69■■■□□ 2.34
GTF3C1-207ENST00000567806 A2ML1A8K2U0 1454 aa29.68■■■□□ 2.34
GTF3C1-207ENST00000567806 TNRQ92752 1358 aa29.67■■■□□ 2.34
GTF3C1-207ENST00000567806 ZNF335Q9H4Z2 1342 aaPredicted RBP29.67■■■□□ 2.34
GTF3C1-207ENST00000567806 IQSEC2Q5JU85 1478 aa29.66■■■□□ 2.34
GTF3C1-207ENST00000567806 TCOF1Q13428 1488 aaKnown RBP29.65■■■□□ 2.34
GTF3C1-207ENST00000567806 KDM5DQ9BY66 1539 aa29.65■■■□□ 2.34
GTF3C1-207ENST00000567806 MAP3K1Q13233 1512 aa29.63■■■□□ 2.33
GTF3C1-207ENST00000567806 FAM135AQ9P2D6 1515 aa29.63■■■□□ 2.33
GTF3C1-207ENST00000567806 PZPP20742 1482 aa29.62■■■□□ 2.33
GTF3C1-207ENST00000567806 APLP2Q06481 763 aa29.61■■■□□ 2.33
GTF3C1-207ENST00000567806 MIA2Q96PC5 1412 aa29.59■■■□□ 2.33
GTF3C1-207ENST00000567806 DNMT1P26358 1616 aaKnown RBP29.59■■■□□ 2.33
GTF3C1-207ENST00000567806 MYOM3Q5VTT5 1437 aa29.58■■■□□ 2.33
GTF3C1-207ENST00000567806 THEMISQ8N1K5 641 aaPredicted RBP29.58■■■□□ 2.33
GTF3C1-207ENST00000567806 UBAP1LF5GYI3 381 aa29.56■■■□□ 2.32
GTF3C1-207ENST00000567806 ANKLE2Q86XL3 938 aa29.56■■■□□ 2.32
GTF3C1-207ENST00000567806 DISP3Q9P2K9 1392 aa29.53■■■□□ 2.32
GTF3C1-207ENST00000567806 MAST1Q9Y2H9 1570 aa29.53■■■□□ 2.32
GTF3C1-207ENST00000567806 NLRP1Q9C000 1473 aa29.5■■■□□ 2.31
GTF3C1-207ENST00000567806 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.5■■■□□ 2.31
GTF3C1-207ENST00000567806 RNF17Q9BXT8 1623 aaKnown RBP29.45■■■□□ 2.3
GTF3C1-207ENST00000567806 UGGT1Q9NYU2 1555 aa29.44■■■□□ 2.3
GTF3C1-207ENST00000567806 ABCC3O15438 1527 aa29.44■■■□□ 2.3
GTF3C1-207ENST00000567806 RRP7BPQ9NSQ0 103 aa29.43■■■□□ 2.3
GTF3C1-207ENST00000567806 DUOX2Q9NRD8 1548 aa29.42■■■□□ 2.3
GTF3C1-207ENST00000567806 EIF2AK4Q9P2K8 1649 aaKnown RBP29.42■■■□□ 2.3
GTF3C1-207ENST00000567806 KIF15Q9NS87 1388 aa29.39■■■□□ 2.3
GTF3C1-207ENST00000567806 POLR1AO95602 1720 aaPredicted RBP29.39■■■□□ 2.3
GTF3C1-207ENST00000567806 NEURL4Q96JN8 1562 aa29.39■■■□□ 2.29
GTF3C1-207ENST00000567806 ABCC5O15440 1437 aa29.38■■■□□ 2.29
GTF3C1-207ENST00000567806 ZC3H13Q5T200 1668 aaKnown RBP29.38■■■□□ 2.29
GTF3C1-207ENST00000567806 SHANK2Q9UPX8 1470 aa29.38■■■□□ 2.29
GTF3C1-207ENST00000567806 NPHP4O75161 1426 aaPredicted RBP29.37■■■□□ 2.29
GTF3C1-207ENST00000567806 TOM1O60784 492 aa29.36■■■□□ 2.29
GTF3C1-207ENST00000567806 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.36■■■□□ 2.29
GTF3C1-207ENST00000567806 ERVK-7P63135 1459 aa29.36■■■□□ 2.29
GTF3C1-207ENST00000567806 SPATA31D1Q6ZQQ2 1576 aa29.35■■■□□ 2.29
GTF3C1-207ENST00000567806 ILDR2Q71H61 639 aa29.35■■■□□ 2.29
GTF3C1-207ENST00000567806 CPS1P31327 1500 aa29.35■■■□□ 2.29
GTF3C1-207ENST00000567806 SCAF1Q9H7N4 1312 aaKnown RBP29.34■■■□□ 2.29
GTF3C1-207ENST00000567806 MED14O60244 1454 aa29.34■■■□□ 2.29
GTF3C1-207ENST00000567806 PTPN23Q9H3S7 1636 aa29.34■■■□□ 2.29
GTF3C1-207ENST00000567806 MROH1Q8NDA8 1641 aa29.32■■■□□ 2.28
GTF3C1-207ENST00000567806 ERBINQ96RT1 1412 aa29.31■■■□□ 2.28
GTF3C1-207ENST00000567806 PIP4K2BP78356 416 aa29.31■■■□□ 2.28
GTF3C1-207ENST00000567806 CHIC2Q9UKJ5 165 aa29.31■■■□□ 2.28
GTF3C1-207ENST00000567806 DEPDC5O75140 1603 aa29.31■■■□□ 2.28
GTF3C1-207ENST00000567806 DAPK1P53355 1430 aa29.3■■■□□ 2.28
GTF3C1-207ENST00000567806 FGD6Q6ZV73 1430 aa29.3■■■□□ 2.28
GTF3C1-207ENST00000567806 KANK1Q14678 1352 aa29.28■■■□□ 2.28
GTF3C1-207ENST00000567806 CEP152O94986 1710 aa29.27■■■□□ 2.28
GTF3C1-207ENST00000567806 ANKRD30AQ9BXX3 1397 aa29.26■■■□□ 2.28
GTF3C1-207ENST00000567806 ARHGAP31Q2M1Z3 1444 aa29.26■■■□□ 2.27
GTF3C1-207ENST00000567806 CFAP65Q6ZU64 1925 aaKnown RBP29.26■■■□□ 2.27
GTF3C1-207ENST00000567806 VWDEQ8N2E2 1590 aa29.25■■■□□ 2.27
GTF3C1-207ENST00000567806 TXNDC2Q86VQ3 553 aa29.23■■■□□ 2.27
GTF3C1-207ENST00000567806 CROCC2H7BZ55 1655 aa29.23■■■□□ 2.27
GTF3C1-207ENST00000567806 PRDM15P57071 1507 aaPredicted RBP29.22■■■□□ 2.27
GTF3C1-207ENST00000567806 SOCS7O14512 581 aa29.22■■■□□ 2.27
GTF3C1-207ENST00000567806 IQGAP1P46940 1657 aa29.21■■■□□ 2.27
GTF3C1-207ENST00000567806 HSPA1LP34931 641 aa29.21■■■□□ 2.27
GTF3C1-207ENST00000567806 STAG3Q9UJ98 1225 aa29.21■■■□□ 2.27
GTF3C1-207ENST00000567806 EID1Q9Y6B2 187 aa29.21■■■□□ 2.27
GTF3C1-207ENST00000567806 LTKP29376 864 aa29.19■■■□□ 2.26
GTF3C1-207ENST00000567806 FAM50AQ14320 339 aaKnown RBP29.19■■■□□ 2.26
GTF3C1-207ENST00000567806 UBR1Q8IWV7 1749 aa29.17■■■□□ 2.26
GTF3C1-207ENST00000567806 SCAF11Q99590 1463 aaKnown RBP29.17■■■□□ 2.26
GTF3C1-207ENST00000567806 IDI1Q13907 227 aa29.12■■■□□ 2.25
GTF3C1-207ENST00000567806 ARHGAP23Q9P227 1491 aa29.11■■■□□ 2.25
GTF3C1-207ENST00000567806 SLIT1O75093 1534 aa29.11■■■□□ 2.25
GTF3C1-207ENST00000567806 LRRC7Q96NW7 1537 aa29.1■■■□□ 2.25
GTF3C1-207ENST00000567806 TMEM2Q9UHN6 1383 aa29.09■■■□□ 2.25
GTF3C1-207ENST00000567806 LMTK2Q8IWU2 1503 aa29.09■■■□□ 2.25
GTF3C1-207ENST00000567806 ADGRL2O95490 1459 aa29.05■■■□□ 2.24
GTF3C1-207ENST00000567806 PIK3C2BO00750 1634 aa29.05■■■□□ 2.24
GTF3C1-207ENST00000567806 STRCP1A6NGW2 1772 aa29.04■■■□□ 2.24
GTF3C1-207ENST00000567806 SLC52A1Q9NWF4 448 aa29.03■■■□□ 2.24
GTF3C1-207ENST00000567806 ANKRD50Q9ULJ7 1429 aa29.02■■■□□ 2.24
GTF3C1-207ENST00000567806 SENP3Q9H4L4 574 aaPredicted RBP29.01■■■□□ 2.23
GTF3C1-207ENST00000567806 SYNMO15061 1565 aa29.01■■■□□ 2.23
GTF3C1-207ENST00000567806 EFCAB6Q5THR3 1501 aa29■■■□□ 2.23
GTF3C1-207ENST00000567806 NOS1P29475 1434 aa28.99■■■□□ 2.23
GTF3C1-207ENST00000567806 ALKQ9UM73 1620 aa28.98■■■□□ 2.23
GTF3C1-207ENST00000567806 BCANQ96GW7 911 aa28.97■■■□□ 2.23
GTF3C1-207ENST00000567806 SLC26A8Q96RN1 970 aa28.96■■■□□ 2.23
GTF3C1-207ENST00000567806 KDM5AP29375 1690 aaKnown RBP28.94■■■□□ 2.22
GTF3C1-207ENST00000567806 KCNA6P17658 529 aa28.94■■■□□ 2.22
GTF3C1-207ENST00000567806 MED1Q15648 1581 aaPredicted RBP28.92■■■□□ 2.22
GTF3C1-207ENST00000567806 HDGFP51858 240 aaKnown RBP28.91■■■□□ 2.22
GTF3C1-207ENST00000567806 PROSER2Q86WR7 435 aaPredicted RBP28.91■■■□□ 2.22
GTF3C1-207ENST00000567806 RPRD2Q5VT52 1461 aaKnown RBP28.91■■■□□ 2.22
GTF3C1-207ENST00000567806 PHF23Q9BUL5 403 aaPredicted RBP28.9■■■□□ 2.22
GTF3C1-207ENST00000567806 ADGRB3O60242 1522 aa28.88■■■□□ 2.21
GTF3C1-207ENST00000567806 TMEM94Q12767 1356 aa28.86■■■□□ 2.21
GTF3C1-207ENST00000567806 PPP1R15AO75807 674 aaPredicted RBP28.85■■■□□ 2.21
GTF3C1-207ENST00000567806 TET3O43151 1660 aa28.85■■■□□ 2.21
GTF3C1-207ENST00000567806 CHGAP10645 457 aaKnown RBP28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms