RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 CEP152O94986 1710 aa26.37■■□□□ 1.81
COMMD4-220ENST00000567720 PRDM15P57071 1507 aaPredicted RBP26.37■■□□□ 1.81
COMMD4-220ENST00000567720 FAM135AQ9P2D6 1515 aa26.37■■□□□ 1.81
COMMD4-220ENST00000567720 GCC2Q8IWJ2 1684 aa26.36■■□□□ 1.81
COMMD4-220ENST00000567720 KDM5DQ9BY66 1539 aa26.35■■□□□ 1.81
COMMD4-220ENST00000567720 AEBP2Q6ZN18 517 aaPredicted RBP26.35■■□□□ 1.81
COMMD4-220ENST00000567720 RRP7BPQ9NSQ0 103 aa26.34■■□□□ 1.81
COMMD4-220ENST00000567720 ROCK1Q13464 1354 aa26.33■■□□□ 1.81
COMMD4-220ENST00000567720 CNTLNQ9NXG0 1405 aa26.32■■□□□ 1.8
COMMD4-220ENST00000567720 KIF3BO15066 747 aa26.31■■□□□ 1.8
COMMD4-220ENST00000567720 ITGAEP38570 1179 aa26.29■■□□□ 1.8
COMMD4-220ENST00000567720 ABCC3O15438 1527 aa26.29■■□□□ 1.8
COMMD4-220ENST00000567720 UNC13BO14795 1591 aa26.29■■□□□ 1.8
COMMD4-220ENST00000567720 CAMSAP1Q5T5Y3 1602 aa26.28■■□□□ 1.8
COMMD4-220ENST00000567720 GGT6Q6P531 493 aa26.28■■□□□ 1.8
COMMD4-220ENST00000567720 PREX1Q8TCU6 1659 aa26.26■■□□□ 1.79
COMMD4-220ENST00000567720 ANKRD50Q9ULJ7 1429 aa26.26■■□□□ 1.79
COMMD4-220ENST00000567720 VWDEQ8N2E2 1590 aa26.25■■□□□ 1.79
COMMD4-220ENST00000567720 ESF1Q9H501 851 aaKnown RBP26.2■■□□□ 1.78
COMMD4-220ENST00000567720 PPP6R1Q9UPN7 881 aa26.19■■□□□ 1.78
COMMD4-220ENST00000567720 CEBPAP49715 358 aaPredicted RBP26.18■■□□□ 1.78
COMMD4-220ENST00000567720 PLPPR3Q6T4P5 718 aa26.18■■□□□ 1.78
COMMD4-220ENST00000567720 MYO3AQ8NEV4 1616 aa26.17■■□□□ 1.78
COMMD4-220ENST00000567720 NAIPQ13075 1403 aa26.17■■□□□ 1.78
COMMD4-220ENST00000567720 ZMYM3Q14202 1370 aa26.17■■□□□ 1.78
COMMD4-220ENST00000567720 PZPP20742 1482 aa26.17■■□□□ 1.78
COMMD4-220ENST00000567720 LMTK2Q8IWU2 1503 aa26.16■■□□□ 1.78
COMMD4-220ENST00000567720 IQGAP3Q86VI3 1631 aa26.16■■□□□ 1.78
COMMD4-220ENST00000567720 SETD1BQ9UPS6 1966 aaKnown RBP26.16■■□□□ 1.78
COMMD4-220ENST00000567720 LMTK3Q96Q04 1460 aa26.16■■□□□ 1.78
COMMD4-220ENST00000567720 HFM1A2PYH4 1435 aa26.15■■□□□ 1.78
COMMD4-220ENST00000567720 ZNF142P52746 1687 aaPredicted RBP26.14■■□□□ 1.78
COMMD4-220ENST00000567720 EFCAB6Q5THR3 1501 aa26.14■■□□□ 1.77
COMMD4-220ENST00000567720 NPATQ14207 1427 aa26.14■■□□□ 1.77
COMMD4-220ENST00000567720 TET3O43151 1660 aa26.13■■□□□ 1.77
COMMD4-220ENST00000567720 WASHC2CQ9Y4E1 1318 aa26.13■■□□□ 1.77
COMMD4-220ENST00000567720 CFAP65Q6ZU64 1925 aaKnown RBP26.12■■□□□ 1.77
COMMD4-220ENST00000567720 SPATA31D1Q6ZQQ2 1576 aa26.09■■□□□ 1.77
COMMD4-220ENST00000567720 KANK1Q14678 1352 aa26.07■■□□□ 1.76
COMMD4-220ENST00000567720 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.06■■□□□ 1.76
COMMD4-220ENST00000567720 E9PCH4 1651 aa26.06■■□□□ 1.76
COMMD4-220ENST00000567720 ERVK-7P63135 1459 aa26.05■■□□□ 1.76
COMMD4-220ENST00000567720 ARHGAP31Q2M1Z3 1444 aa26.05■■□□□ 1.76
COMMD4-220ENST00000567720 CEP170BQ9Y4F5 1589 aaPredicted RBP26.04■■□□□ 1.76
COMMD4-220ENST00000567720 UHRF1BP1Q6BDS2 1440 aa26.04■■□□□ 1.76
COMMD4-220ENST00000567720 SYNMO15061 1565 aa25.99■■□□□ 1.75
COMMD4-220ENST00000567720 TNRQ92752 1358 aa25.97■■□□□ 1.75
COMMD4-220ENST00000567720 FBXO31Q5XUX0 539 aaPredicted RBP25.97■■□□□ 1.75
COMMD4-220ENST00000567720 RPRD2Q5VT52 1461 aaKnown RBP25.96■■□□□ 1.75
COMMD4-220ENST00000567720 NUP155O75694 1391 aa25.94■■□□□ 1.74
COMMD4-220ENST00000567720 A2ML1A8K2U0 1454 aa25.93■■□□□ 1.74
COMMD4-220ENST00000567720 SPHKAPQ2M3C7 1700 aa25.93■■□□□ 1.74
COMMD4-220ENST00000567720 NLRP1Q9C000 1473 aa25.92■■□□□ 1.74
COMMD4-220ENST00000567720 STRCQ7RTU9 1775 aa25.92■■□□□ 1.74
COMMD4-220ENST00000567720 UBR1Q8IWV7 1749 aa25.91■■□□□ 1.74
COMMD4-220ENST00000567720 PIK3C2BO00750 1634 aa25.91■■□□□ 1.74
COMMD4-220ENST00000567720 NOS1P29475 1434 aa25.9■■□□□ 1.74
COMMD4-220ENST00000567720 SETD5Q9C0A6 1442 aa25.88■■□□□ 1.73
COMMD4-220ENST00000567720 HSPA2P54652 639 aa25.88■■□□□ 1.73
COMMD4-220ENST00000567720 POLR1AO95602 1720 aaPredicted RBP25.87■■□□□ 1.73
COMMD4-220ENST00000567720 KDM5AP29375 1690 aaKnown RBP25.87■■□□□ 1.73
COMMD4-220ENST00000567720 MYO5BQ9ULV0 1848 aa25.85■■□□□ 1.73
COMMD4-220ENST00000567720 UGGT1Q9NYU2 1555 aa25.85■■□□□ 1.73
COMMD4-220ENST00000567720 RAB3GAP2Q9H2M9 1393 aa25.83■■□□□ 1.73
COMMD4-220ENST00000567720 ADGRB3O60242 1522 aa25.81■■□□□ 1.72
COMMD4-220ENST00000567720 PLA2R1Q13018 1463 aa25.8■■□□□ 1.72
COMMD4-220ENST00000567720 TRPM2O94759 1503 aa25.78■■□□□ 1.72
COMMD4-220ENST00000567720 CLTCL1P53675 1640 aa25.77■■□□□ 1.72
COMMD4-220ENST00000567720 TRIM52Q96A61 297 aa25.76■■□□□ 1.71
COMMD4-220ENST00000567720 NEURL4Q96JN8 1562 aa25.76■■□□□ 1.71
COMMD4-220ENST00000567720 TMEM131LA2VDJ0 1609 aa25.75■■□□□ 1.71
COMMD4-220ENST00000567720 PTPRTO14522 1441 aa25.74■■□□□ 1.71
COMMD4-220ENST00000567720 SLIT1O75093 1534 aa25.7■■□□□ 1.7
COMMD4-220ENST00000567720 ARHGAP23Q9P227 1491 aa25.69■■□□□ 1.7
COMMD4-220ENST00000567720 KIF1BO60333 1816 aa25.69■■□□□ 1.7
COMMD4-220ENST00000567720 SLC4A1APQ9BWU0 796 aaKnown RBP25.68■■□□□ 1.7
COMMD4-220ENST00000567720 PKD2Q13563 968 aa25.67■■□□□ 1.7
COMMD4-220ENST00000567720 IDI1Q13907 227 aa25.66■■□□□ 1.7
COMMD4-220ENST00000567720 IQGAP1P46940 1657 aa25.65■■□□□ 1.7
COMMD4-220ENST00000567720 SLC52A1Q9NWF4 448 aa25.64■■□□□ 1.7
COMMD4-220ENST00000567720 ACIN1Q9UKV3 1341 aaKnown RBP25.63■■□□□ 1.69
COMMD4-220ENST00000567720 THEMISQ8N1K5 641 aaPredicted RBP25.61■■□□□ 1.69
COMMD4-220ENST00000567720 MPHOSPH9Q99550 1183 aa25.61■■□□□ 1.69
COMMD4-220ENST00000567720 SCAF11Q99590 1463 aaKnown RBP25.6■■□□□ 1.69
COMMD4-220ENST00000567720 TRIM26Q12899 539 aaPredicted RBP25.6■■□□□ 1.69
COMMD4-220ENST00000567720 NCKAP5LQ9HCH0 1330 aa25.6■■□□□ 1.69
COMMD4-220ENST00000567720 TMEM2Q9UHN6 1383 aa25.59■■□□□ 1.69
COMMD4-220ENST00000567720 FOXD1Q16676 465 aa25.59■■□□□ 1.69
COMMD4-220ENST00000567720 MED14O60244 1454 aa25.59■■□□□ 1.69
COMMD4-220ENST00000567720 ZFYVE9O95405 1425 aa25.57■■□□□ 1.68
COMMD4-220ENST00000567720 HRCP23327 699 aa25.57■■□□□ 1.68
COMMD4-220ENST00000567720 STAG3Q9UJ98 1225 aa25.55■■□□□ 1.68
COMMD4-220ENST00000567720 NPHP4O75161 1426 aaPredicted RBP25.53■■□□□ 1.68
COMMD4-220ENST00000567720 IFT172Q9UG01 1749 aa25.52■■□□□ 1.68
COMMD4-220ENST00000567720 NEXMIFQ5QGS0 1516 aa25.52■■□□□ 1.68
COMMD4-220ENST00000567720 PPLO60437 1756 aa25.51■■□□□ 1.67
COMMD4-220ENST00000567720 RIMS2Q9UQ26 1411 aa25.51■■□□□ 1.67
COMMD4-220ENST00000567720 CCDC144AA2RUR9 1427 aa25.5■■□□□ 1.67
COMMD4-220ENST00000567720 ANKLE2Q86XL3 938 aa25.5■■□□□ 1.67
COMMD4-220ENST00000567720 LTKP29376 864 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms