RNA–Protein interactions for RNA: ENST00000564067.5

TRAF7-202, Transcript of TNF receptor associated factor 7, humanhuman

TSL 3

Gene TRAF7, Length 874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF7-202ENST00000564067 POLR1AO95602 1720 aaPredicted RBP28.85■■■□□ 2.21
TRAF7-202ENST00000564067 RTEL1-TNFRSF6BF6WH68 1400 aa28.84■■■□□ 2.21
TRAF7-202ENST00000564067 THEMISQ8N1K5 641 aaPredicted RBP28.83■■■□□ 2.21
TRAF7-202ENST00000564067 NEURL4Q96JN8 1562 aa28.83■■■□□ 2.21
TRAF7-202ENST00000564067 DHX29Q7Z478 1369 aaKnown RBP28.82■■■□□ 2.2
TRAF7-202ENST00000564067 FAM135AQ9P2D6 1515 aa28.8■■■□□ 2.2
TRAF7-202ENST00000564067 MTUS2Q5JR59 1369 aa28.8■■■□□ 2.2
TRAF7-202ENST00000564067 FBXO31Q5XUX0 539 aaPredicted RBP28.79■■■□□ 2.2
TRAF7-202ENST00000564067 PZPP20742 1482 aa28.78■■■□□ 2.2
TRAF7-202ENST00000564067 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.76■■■□□ 2.21e-6■■■■■ 39
TRAF7-202ENST00000564067 KIF3BO15066 747 aa28.76■■■□□ 2.19
TRAF7-202ENST00000564067 MBD5Q9P267 1494 aa28.75■■■□□ 2.19
TRAF7-202ENST00000564067 VWDEQ8N2E2 1590 aa28.75■■■□□ 2.19
TRAF7-202ENST00000564067 KDM5DQ9BY66 1539 aa28.74■■■□□ 2.19
TRAF7-202ENST00000564067 WASHC2CQ9Y4E1 1318 aa28.74■■■□□ 2.19
TRAF7-202ENST00000564067 MED14O60244 1454 aa28.74■■■□□ 2.19
TRAF7-202ENST00000564067 NLRP1Q9C000 1473 aa28.74■■■□□ 2.19
TRAF7-202ENST00000564067 ZNF644Q9H582 1327 aaPredicted RBP28.73■■■□□ 2.19
TRAF7-202ENST00000564067 NPHP4O75161 1426 aaPredicted RBP28.73■■■□□ 2.19
TRAF7-202ENST00000564067 MIA2Q96PC5 1412 aa28.72■■■□□ 2.19
TRAF7-202ENST00000564067 CHIC1Q5VXU3 224 aa28.71■■■□□ 2.19
TRAF7-202ENST00000564067 DEPDC5O75140 1603 aa28.7■■■□□ 2.19
TRAF7-202ENST00000564067 UGGT1Q9NYU2 1555 aa28.69■■■□□ 2.18
TRAF7-202ENST00000564067 RSPH4AQ5TD94 716 aa28.68■■■□□ 2.18
TRAF7-202ENST00000564067 TIAM1Q13009 1591 aa28.66■■■□□ 2.18
TRAF7-202ENST00000564067 ALKQ9UM73 1620 aa28.65■■■□□ 2.18
TRAF7-202ENST00000564067 CCDC141Q6ZP82 1450 aa28.62■■■□□ 2.17
TRAF7-202ENST00000564067 IQGAP1P46940 1657 aa28.61■■■□□ 2.17
TRAF7-202ENST00000564067 EHBP1L1Q8N3D4 1523 aa28.6■■■□□ 2.17
TRAF7-202ENST00000564067 LRRC7Q96NW7 1537 aa28.6■■■□□ 2.17
TRAF7-202ENST00000564067 CEP162Q5TB80 1403 aa28.6■■■□□ 2.17
TRAF7-202ENST00000564067 SYNMO15061 1565 aa28.58■■■□□ 2.17
TRAF7-202ENST00000564067 RNF17Q9BXT8 1623 aaKnown RBP28.58■■■□□ 2.17
TRAF7-202ENST00000564067 SENP3Q9H4L4 574 aaPredicted RBP28.55■■■□□ 2.16
TRAF7-202ENST00000564067 TSPY4P0CV99 314 aa28.53■■■□□ 2.16
TRAF7-202ENST00000564067 TSPY10P0CW01 314 aa28.53■■■□□ 2.16
TRAF7-202ENST00000564067 CAMSAP2Q08AD1 1489 aa28.5■■■□□ 2.15
TRAF7-202ENST00000564067 STRCP1A6NGW2 1772 aa28.48■■■□□ 2.15
TRAF7-202ENST00000564067 RGS17Q9UGC6 210 aaPredicted RBP28.48■■■□□ 2.15
TRAF7-202ENST00000564067 ZC3H13Q5T200 1668 aaKnown RBP28.44■■■□□ 2.14
TRAF7-202ENST00000564067 ARHGEF5Q12774 1597 aa28.43■■■□□ 2.14
TRAF7-202ENST00000564067 ABCC3O15438 1527 aa28.43■■■□□ 2.14
TRAF7-202ENST00000564067 ERVK-7P63135 1459 aa28.42■■■□□ 2.14
TRAF7-202ENST00000564067 SCAF11Q99590 1463 aaKnown RBP28.42■■■□□ 2.14
TRAF7-202ENST00000564067 NCOA2Q15596 1464 aa28.41■■■□□ 2.14
TRAF7-202ENST00000564067 FAM135BQ49AJ0 1406 aa28.38■■■□□ 2.13
TRAF7-202ENST00000564067 TXNDC2Q86VQ3 553 aa28.38■■■□□ 2.13
TRAF7-202ENST00000564067 EID1Q9Y6B2 187 aa28.36■■■□□ 2.13
TRAF7-202ENST00000564067 UBR1Q8IWV7 1749 aa28.34■■■□□ 2.13
TRAF7-202ENST00000564067 SLIT1O75093 1534 aa28.33■■■□□ 2.13
TRAF7-202ENST00000564067 EIF2AK4Q9P2K8 1649 aaKnown RBP28.33■■■□□ 2.13
TRAF7-202ENST00000564067 LTKP29376 864 aa28.33■■■□□ 2.13
TRAF7-202ENST00000564067 ARHGAP23Q9P227 1491 aa28.33■■■□□ 2.13
TRAF7-202ENST00000564067 MAST1Q9Y2H9 1570 aa28.3■■■□□ 2.12
TRAF7-202ENST00000564067 POTEAQ6S8J7 498 aa28.3■■■□□ 2.12
TRAF7-202ENST00000564067 ARHGAP31Q2M1Z3 1444 aa28.26■■■□□ 2.11
TRAF7-202ENST00000564067 XIRP1Q702N8 1843 aaKnown RBP28.25■■■□□ 2.11
TRAF7-202ENST00000564067 MROH1Q8NDA8 1641 aa28.23■■■□□ 2.11
TRAF7-202ENST00000564067 TMEM94Q12767 1356 aa28.23■■■□□ 2.11
TRAF7-202ENST00000564067 CFAP65Q6ZU64 1925 aaKnown RBP28.22■■■□□ 2.11
TRAF7-202ENST00000564067 TMEM2Q9UHN6 1383 aa28.22■■■□□ 2.11
TRAF7-202ENST00000564067 KCNA6P17658 529 aa28.21■■■□□ 2.11
TRAF7-202ENST00000564067 STAG3Q9UJ98 1225 aa28.21■■■□□ 2.11
TRAF7-202ENST00000564067 CEP152O94986 1710 aa28.21■■■□□ 2.11
TRAF7-202ENST00000564067 DUOX2Q9NRD8 1548 aa28.2■■■□□ 2.1
TRAF7-202ENST00000564067 LRRC9Q6ZRR7 1453 aa28.2■■■□□ 2.1
TRAF7-202ENST00000564067 PROSER2Q86WR7 435 aaPredicted RBP28.17■■■□□ 2.1
TRAF7-202ENST00000564067 ROBO1Q9Y6N7 1651 aa28.14■■■□□ 2.1
TRAF7-202ENST00000564067 MYOM3Q5VTT5 1437 aa28.13■■■□□ 2.09
TRAF7-202ENST00000564067 PRDM15P57071 1507 aaPredicted RBP28.13■■■□□ 2.09
TRAF7-202ENST00000564067 ERBINQ96RT1 1412 aa28.1■■■□□ 2.09
TRAF7-202ENST00000564067 PIK3C2BO00750 1634 aa28.1■■■□□ 2.09
TRAF7-202ENST00000564067 JCADQ9P266 1359 aa28.1■■■□□ 2.09
TRAF7-202ENST00000564067 KDM5AP29375 1690 aaKnown RBP28.1■■■□□ 2.09
TRAF7-202ENST00000564067 MAP3K1Q13233 1512 aa28.09■■■□□ 2.09
TRAF7-202ENST00000564067 EFCAB6Q5THR3 1501 aa28.09■■■□□ 2.09
TRAF7-202ENST00000564067 MSH6P52701 1360 aa28.09■■■□□ 2.09
TRAF7-202ENST00000564067 KANK1Q14678 1352 aa28.09■■■□□ 2.09
TRAF7-202ENST00000564067 KIF15Q9NS87 1388 aa28.09■■■□□ 2.09
TRAF7-202ENST00000564067 NKTRP30414 1462 aaKnown RBP28.08■■■□□ 2.09
TRAF7-202ENST00000564067 SLC26A8Q96RN1 970 aa28.08■■■□□ 2.09
TRAF7-202ENST00000564067 SLAIN2Q9P270 581 aa28.07■■■□□ 2.08
TRAF7-202ENST00000564067 IDI1Q13907 227 aa28.06■■■□□ 2.08
TRAF7-202ENST00000564067 TET3O43151 1660 aa28.05■■■□□ 2.08
TRAF7-202ENST00000564067 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.05■■■□□ 2.08
TRAF7-202ENST00000564067 RBM33Q96EV2 1170 aaKnown RBP28.02■■■□□ 2.08
TRAF7-202ENST00000564067 RRP7BPQ9NSQ0 103 aa28.01■■■□□ 2.07
TRAF7-202ENST00000564067 NWD1Q149M9 1564 aa28■■■□□ 2.07
TRAF7-202ENST00000564067 BCANQ96GW7 911 aa28■■■□□ 2.07
TRAF7-202ENST00000564067 PHLPP1O60346 1717 aa27.99■■■□□ 2.07
TRAF7-202ENST00000564067 ZNF772Q68DY9 489 aaPredicted RBP27.99■■■□□ 2.07
TRAF7-202ENST00000564067 SETD1AO15047 1707 aaKnown RBP27.98■■■□□ 2.07
TRAF7-202ENST00000564067 SPATA31A6Q5VVP1 1343 aa27.97■■■□□ 2.07
TRAF7-202ENST00000564067 SLC52A1Q9NWF4 448 aa27.97■■■□□ 2.07
TRAF7-202ENST00000564067 LMTK2Q8IWU2 1503 aa27.97■■■□□ 2.07
TRAF7-202ENST00000564067 VPS8Q8N3P4 1428 aa27.95■■■□□ 2.07
TRAF7-202ENST00000564067 FGD6Q6ZV73 1430 aa27.94■■■□□ 2.06
TRAF7-202ENST00000564067 MEX3CQ5U5Q3 659 aaKnown RBP27.94■■■□□ 2.06
TRAF7-202ENST00000564067 UPF1Q92900 1129 aaKnown RBP eCLIP27.94■■■□□ 2.06
TRAF7-202ENST00000564067 HDGFP51858 240 aaKnown RBP27.93■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms