RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.17■■□□□ 1.78
RNF40-205ENST00000563909 CASKIN1Q8WXD9 1431 aa26.16■■□□□ 1.78
RNF40-205ENST00000563909 KIAA1107Q9UPP5 1409 aa26.16■■□□□ 1.78
RNF40-205ENST00000563909 THEMISQ8N1K5 641 aaPredicted RBP26.14■■□□□ 1.78
RNF40-205ENST00000563909 CFDP1Q9UEE9 299 aaPredicted RBP26.14■■□□□ 1.78
RNF40-205ENST00000563909 PLEKHH2Q8IVE3 1493 aa26.12■■□□□ 1.77
RNF40-205ENST00000563909 NPHP4O75161 1426 aaPredicted RBP26.12■■□□□ 1.77
RNF40-205ENST00000563909 ADGBQ8N7X0 1667 aa26.09■■□□□ 1.77
RNF40-205ENST00000563909 MED14O60244 1454 aa26.07■■□□□ 1.76
RNF40-205ENST00000563909 LRRC7Q96NW7 1537 aa26.07■■□□□ 1.76
RNF40-205ENST00000563909 PZPP20742 1482 aa26.05■■□□□ 1.76
RNF40-205ENST00000563909 CCNB3Q8WWL7 1395 aa26.04■■□□□ 1.76
RNF40-205ENST00000563909 DEPDC5O75140 1603 aa26.03■■□□□ 1.76
RNF40-205ENST00000563909 MIA2Q96PC5 1412 aa26.03■■□□□ 1.76
RNF40-205ENST00000563909 KIF3BO15066 747 aa26.02■■□□□ 1.76
RNF40-205ENST00000563909 POTEAQ6S8J7 498 aa26.02■■□□□ 1.76
RNF40-205ENST00000563909 WASHC2CQ9Y4E1 1318 aa26.02■■□□□ 1.76
RNF40-205ENST00000563909 DHX29Q7Z478 1369 aaKnown RBP26.02■■□□□ 1.76
RNF40-205ENST00000563909 FAM135AQ9P2D6 1515 aa26.02■■□□□ 1.76
RNF40-205ENST00000563909 UGGT1Q9NYU2 1555 aa26.02■■□□□ 1.76
RNF40-205ENST00000563909 RNF17Q9BXT8 1623 aaKnown RBP26.02■■□□□ 1.76
RNF40-205ENST00000563909 STRCP1A6NGW2 1772 aa26.01■■□□□ 1.75
RNF40-205ENST00000563909 NLRP1Q9C000 1473 aa26■■□□□ 1.75
RNF40-205ENST00000563909 ZNF644Q9H582 1327 aaPredicted RBP26■■□□□ 1.75
RNF40-205ENST00000563909 IQGAP1P46940 1657 aa25.99■■□□□ 1.75
RNF40-205ENST00000563909 KDM5DQ9BY66 1539 aa25.98■■□□□ 1.75
RNF40-205ENST00000563909 FYCO1Q9BQS8 1478 aa25.98■■□□□ 1.75
RNF40-205ENST00000563909 SYNMO15061 1565 aa25.95■■□□□ 1.75
RNF40-205ENST00000563909 RTEL1-TNFRSF6BF6WH68 1400 aa25.95■■□□□ 1.74
RNF40-205ENST00000563909 MBD5Q9P267 1494 aa25.92■■□□□ 1.74
RNF40-205ENST00000563909 MTUS2Q5JR59 1369 aa25.85■■□□□ 1.73
RNF40-205ENST00000563909 FAM135BQ49AJ0 1406 aa25.83■■□□□ 1.73
RNF40-205ENST00000563909 CHIC1Q5VXU3 224 aa25.83■■□□□ 1.73
RNF40-205ENST00000563909 ZC3H13Q5T200 1668 aaKnown RBP25.81■■□□□ 1.72
RNF40-205ENST00000563909 TIAM1Q13009 1591 aa25.79■■□□□ 1.72
RNF40-205ENST00000563909 SETD1AO15047 1707 aaKnown RBP25.78■■□□□ 1.72
RNF40-205ENST00000563909 SCAF11Q99590 1463 aaKnown RBP25.77■■□□□ 1.72
RNF40-205ENST00000563909 XIRP1Q702N8 1843 aaKnown RBP25.77■■□□□ 1.72
RNF40-205ENST00000563909 LTKP29376 864 aa25.76■■□□□ 1.71
RNF40-205ENST00000563909 TXNDC2Q86VQ3 553 aa25.76■■□□□ 1.71
RNF40-205ENST00000563909 CCDC141Q6ZP82 1450 aa25.75■■□□□ 1.71
RNF40-205ENST00000563909 RSPH4AQ5TD94 716 aa25.72■■□□□ 1.71
RNF40-205ENST00000563909 ERVK-7P63135 1459 aa25.72■■□□□ 1.71
RNF40-205ENST00000563909 ABCC3O15438 1527 aa25.7■■□□□ 1.7
RNF40-205ENST00000563909 TMEM94Q12767 1356 aa25.69■■□□□ 1.7
RNF40-205ENST00000563909 UBR1Q8IWV7 1749 aa25.69■■□□□ 1.7
RNF40-205ENST00000563909 ROBO1Q9Y6N7 1651 aa25.68■■□□□ 1.7
RNF40-205ENST00000563909 NCOA2Q15596 1464 aa25.68■■□□□ 1.7
RNF40-205ENST00000563909 UPF1Q92900 1129 aaKnown RBP eCLIP25.68■■□□□ 1.7
RNF40-205ENST00000563909 EID1Q9Y6B2 187 aa25.68■■□□□ 1.7
RNF40-205ENST00000563909 TSPY4P0CV99 314 aa25.66■■□□□ 1.7
RNF40-205ENST00000563909 TSPY10P0CW01 314 aa25.66■■□□□ 1.7
RNF40-205ENST00000563909 CAMSAP2Q08AD1 1489 aa25.66■■□□□ 1.7
RNF40-205ENST00000563909 ARHGAP23Q9P227 1491 aa25.66■■□□□ 1.7
RNF40-205ENST00000563909 CEP162Q5TB80 1403 aa25.64■■□□□ 1.7
RNF40-205ENST00000563909 SLIT1O75093 1534 aa25.64■■□□□ 1.7
RNF40-205ENST00000563909 RBM33Q96EV2 1170 aaKnown RBP25.64■■□□□ 1.7
RNF40-205ENST00000563909 EHBP1L1Q8N3D4 1523 aa25.63■■□□□ 1.69
RNF40-205ENST00000563909 PROSER2Q86WR7 435 aaPredicted RBP25.63■■□□□ 1.69
RNF40-205ENST00000563909 JCADQ9P266 1359 aa25.6■■□□□ 1.69
RNF40-205ENST00000563909 KCNA6P17658 529 aa25.6■■□□□ 1.69
RNF40-205ENST00000563909 TRIM52Q96A61 297 aa25.6■■□□□ 1.69
RNF40-205ENST00000563909 SRCAPQ6ZRS2 3230 aa25.6■■□□□ 1.69
RNF40-205ENST00000563909 CFAP65Q6ZU64 1925 aaKnown RBP25.59■■□□□ 1.69
RNF40-205ENST00000563909 LRRC9Q6ZRR7 1453 aa25.58■■□□□ 1.69
RNF40-205ENST00000563909 SLAIN2Q9P270 581 aa25.56■■□□□ 1.68
RNF40-205ENST00000563909 MAP3K1Q13233 1512 aa25.56■■□□□ 1.68
RNF40-205ENST00000563909 SLC26A8Q96RN1 970 aa25.55■■□□□ 1.68
RNF40-205ENST00000563909 ARHGEF5Q12774 1597 aa25.55■■□□□ 1.68
RNF40-205ENST00000563909 TMEM2Q9UHN6 1383 aa25.55■■□□□ 1.68
RNF40-205ENST00000563909 PHLPP1O60346 1717 aa25.54■■□□□ 1.68
RNF40-205ENST00000563909 MEX3CQ5U5Q3 659 aaKnown RBP25.53■■□□□ 1.68
RNF40-205ENST00000563909 ZNF772Q68DY9 489 aaPredicted RBP25.53■■□□□ 1.68
RNF40-205ENST00000563909 STAG3Q9UJ98 1225 aa25.53■■□□□ 1.68
RNF40-205ENST00000563909 CEP152O94986 1710 aa25.52■■□□□ 1.68
RNF40-205ENST00000563909 MROH1Q8NDA8 1641 aa25.52■■□□□ 1.68
RNF40-205ENST00000563909 MSH6P52701 1360 aa25.5■■□□□ 1.67
RNF40-205ENST00000563909 EIF2AK4Q9P2K8 1649 aaKnown RBP25.49■■□□□ 1.67
RNF40-205ENST00000563909 PRDM15P57071 1507 aaPredicted RBP25.49■■□□□ 1.67
RNF40-205ENST00000563909 LRP6O75581 1613 aa25.47■■□□□ 1.67
RNF40-205ENST00000563909 SPATA31A6Q5VVP1 1343 aa25.46■■□□□ 1.67
RNF40-205ENST00000563909 PIK3C2BO00750 1634 aa25.46■■□□□ 1.67
RNF40-205ENST00000563909 ARHGAP31Q2M1Z3 1444 aa25.46■■□□□ 1.67
RNF40-205ENST00000563909 RXRBP28702 533 aa25.45■■□□□ 1.66
RNF40-205ENST00000563909 TET3O43151 1660 aa25.44■■□□□ 1.66
RNF40-205ENST00000563909 NKTRP30414 1462 aaKnown RBP25.43■■□□□ 1.66
RNF40-205ENST00000563909 MAST1Q9Y2H9 1570 aa25.43■■□□□ 1.66
RNF40-205ENST00000563909 COL16A1Q07092 1604 aaPredicted RBP25.42■■□□□ 1.66
RNF40-205ENST00000563909 BCANQ96GW7 911 aa25.42■■□□□ 1.66
RNF40-205ENST00000563909 EFCAB6Q5THR3 1501 aa25.41■■□□□ 1.66
RNF40-205ENST00000563909 IDI1Q13907 227 aa25.4■■□□□ 1.66
RNF40-205ENST00000563909 FGD6Q6ZV73 1430 aa25.38■■□□□ 1.65
RNF40-205ENST00000563909 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.38■■□□□ 1.653e-7■■□□□ 11.5
RNF40-205ENST00000563909 NWD1Q149M9 1564 aa25.38■■□□□ 1.65
RNF40-205ENST00000563909 DUOX2Q9NRD8 1548 aa25.36■■□□□ 1.65
RNF40-205ENST00000563909 CDK12Q9NYV4 1490 aaPredicted RBP25.33■■□□□ 1.65
RNF40-205ENST00000563909 KDM5AP29375 1690 aaKnown RBP25.32■■□□□ 1.64
RNF40-205ENST00000563909 NUTM2BA6NNL0 878 aaPredicted RBP25.32■■□□□ 1.64
RNF40-205ENST00000563909 NUTM2EB1AL46 878 aaPredicted RBP25.32■■□□□ 1.64
RNF40-205ENST00000563909 NUTM2AQ8IVF1 878 aaPredicted RBP25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms