RNA–Protein interactions for RNA: ENST00000562330.5

TAF1C-206, Transcript of TATA-box binding protein associated factor, RNA polymerase I subunit C, human

TSL 3

Gene TAF1C, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TAF1C-206	ENST00000562330	SHANK2	Q9UPX8	1470 aa		28.53	■■■□□ 2.16
TAF1C-206	ENST00000562330	DAPK1	P53355	1430 aa		28.53	■■■□□ 2.16
TAF1C-206	ENST00000562330	FAM135A	Q9P2D6	1515 aa		28.52	■■■□□ 2.16
TAF1C-206	ENST00000562330	DNMT1	P26358	1616 aa	Known RBP	28.51	■■■□□ 2.15
TAF1C-206	ENST00000562330	MYO3A	Q8NEV4	1616 aa		28.51	■■■□□ 2.15
TAF1C-206	ENST00000562330	RNF17	Q9BXT8	1623 aa	Known RBP	28.5	■■■□□ 2.15
TAF1C-206	ENST00000562330	KIF15	Q9NS87	1388 aa		28.5	■■■□□ 2.15
TAF1C-206	ENST00000562330	DUOX2	Q9NRD8	1548 aa		28.49	■■■□□ 2.15
TAF1C-206	ENST00000562330	RRP7BP	Q9NSQ0	103 aa		28.49	■■■□□ 2.15
TAF1C-206	ENST00000562330	EIF2AK4	Q9P2K8	1649 aa	Known RBP	28.49	■■■□□ 2.15
TAF1C-206	ENST00000562330	FBXO31	Q5XUX0	539 aa	Predicted RBP	28.48	■■■□□ 2.15
TAF1C-206	ENST00000562330	DMRT2	Q9Y5R5	561 aa		28.48	■■■□□ 2.15
TAF1C-206	ENST00000562330	NCOA1	Q15788	1441 aa		28.46	■■■□□ 2.15
TAF1C-206	ENST00000562330	CHIC2	Q9UKJ5	165 aa		28.46	■■■□□ 2.15
TAF1C-206	ENST00000562330	PZP	P20742	1482 aa		28.46	■■■□□ 2.15
TAF1C-206	ENST00000562330	CAMSAP1	Q5T5Y3	1602 aa		28.45	■■■□□ 2.14
TAF1C-206	ENST00000562330	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	28.45	■■■□□ 2.14
TAF1C-206	ENST00000562330	ZNF142	P52746	1687 aa	Predicted RBP	28.45	■■■□□ 2.14
TAF1C-206	ENST00000562330	FAM50A	Q14320	339 aa	Known RBP	28.44	■■■□□ 2.14
TAF1C-206	ENST00000562330	MROH1	Q8NDA8	1641 aa		28.43	■■■□□ 2.14
TAF1C-206	ENST00000562330	ABCC3	O15438	1527 aa		28.43	■■■□□ 2.14
TAF1C-206	ENST00000562330	TNR	Q92752	1358 aa		28.42	■■■□□ 2.14
TAF1C-206	ENST00000562330	ERBIN	Q96RT1	1412 aa		28.4	■■■□□ 2.14
TAF1C-206	ENST00000562330	ANKRD30A	Q9BXX3	1397 aa		28.39	■■■□□ 2.14
TAF1C-206	ENST00000562330	PTPRT	O14522	1441 aa		28.39	■■■□□ 2.14
TAF1C-206	ENST00000562330	FBXO41	Q8TF61	875 aa		28.39	■■■□□ 2.14
TAF1C-206	ENST00000562330	A2ML1	A8K2U0	1454 aa		28.38	■■■□□ 2.13
TAF1C-206	ENST00000562330	ZC3H13	Q5T200	1668 aa	Known RBP	28.38	■■■□□ 2.13
TAF1C-206	ENST00000562330	PPARGC1B	Q86YN6	1023 aa	Known RBP	28.37	■■■□□ 2.13
TAF1C-206	ENST00000562330	NCKAP5L	Q9HCH0	1330 aa		28.37	■■■□□ 2.13
TAF1C-206	ENST00000562330	CERK	Q8TCT0	537 aa		28.34	■■■□□ 2.13
TAF1C-206	ENST00000562330	CEP152	O94986	1710 aa		28.34	■■■□□ 2.13
TAF1C-206	ENST00000562330	PLA2R1	Q13018	1463 aa		28.33	■■■□□ 2.13
TAF1C-206	ENST00000562330	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	28.32	■■■□□ 2.12	6e-6	■□□□□ 11
TAF1C-206	ENST00000562330	PRDM15	P57071	1507 aa	Predicted RBP	28.32	■■■□□ 2.12
TAF1C-206	ENST00000562330	ADGRL2	O95490	1459 aa		28.31	■■■□□ 2.12
TAF1C-206	ENST00000562330	PKD2	Q13563	968 aa		28.28	■■■□□ 2.12
TAF1C-206	ENST00000562330	DEPDC5	O75140	1603 aa		28.28	■■■□□ 2.12
TAF1C-206	ENST00000562330	ERVK-7	P63135	1459 aa		28.27	■■■□□ 2.12
TAF1C-206	ENST00000562330	SPATA31D1	Q6ZQQ2	1576 aa		28.27	■■■□□ 2.12
TAF1C-206	ENST00000562330	NLRP1	Q9C000	1473 aa		28.27	■■■□□ 2.12
TAF1C-206	ENST00000562330	KANK1	Q14678	1352 aa		28.24	■■■□□ 2.11
TAF1C-206	ENST00000562330	UGGT1	Q9NYU2	1555 aa		28.21	■■■□□ 2.11
TAF1C-206	ENST00000562330	CFAP65	Q6ZU64	1925 aa	Known RBP	28.21	■■■□□ 2.11
TAF1C-206	ENST00000562330	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	28.21	■■■□□ 2.11
TAF1C-206	ENST00000562330	ARHGAP31	Q2M1Z3	1444 aa		28.2	■■■□□ 2.11
TAF1C-206	ENST00000562330	THEMIS	Q8N1K5	641 aa	Predicted RBP	28.2	■■■□□ 2.1
TAF1C-206	ENST00000562330	ANKRD50	Q9ULJ7	1429 aa		28.19	■■■□□ 2.1
TAF1C-206	ENST00000562330	LTBP4	Q8N2S1	1624 aa		28.18	■■■□□ 2.1
TAF1C-206	ENST00000562330	VWDE	Q8N2E2	1590 aa		28.17	■■■□□ 2.1
TAF1C-206	ENST00000562330	ITGAE	P38570	1179 aa		28.16	■■■□□ 2.1
TAF1C-206	ENST00000562330	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	28.16	■■■□□ 2.1
TAF1C-206	ENST00000562330	LMTK2	Q8IWU2	1503 aa		28.15	■■■□□ 2.1
TAF1C-206	ENST00000562330	POLR1A	O95602	1720 aa	Predicted RBP	28.15	■■■□□ 2.1
TAF1C-206	ENST00000562330	NEURL4	Q96JN8	1562 aa		28.14	■■■□□ 2.1
TAF1C-206	ENST00000562330	ANKLE2	Q86XL3	938 aa		28.13	■■■□□ 2.09
TAF1C-206	ENST00000562330	ROCK1	Q13464	1354 aa		28.11	■■■□□ 2.09
TAF1C-206	ENST00000562330	EFCAB6	Q5THR3	1501 aa		28.08	■■■□□ 2.08
TAF1C-206	ENST00000562330	UBR1	Q8IWV7	1749 aa		28.07	■■■□□ 2.08
TAF1C-206	ENST00000562330	NPHP4	O75161	1426 aa	Predicted RBP	28.04	■■■□□ 2.08
TAF1C-206	ENST00000562330	MED14	O60244	1454 aa		28.03	■■■□□ 2.08
TAF1C-206	ENST00000562330	PIK3C2B	O00750	1634 aa		28.02	■■■□□ 2.08
TAF1C-206	ENST00000562330	UNC13B	O14795	1591 aa		28.02	■■■□□ 2.08
TAF1C-206	ENST00000562330	SYNM	O15061	1565 aa		28.01	■■■□□ 2.07
TAF1C-206	ENST00000562330	RRBP1	Q9P2E9	1410 aa	Known RBP	28.01	■■■□□ 2.07
TAF1C-206	ENST00000562330	IQSEC2	Q5JU85	1478 aa		28	■■■□□ 2.07
TAF1C-206	ENST00000562330	NOS1	P29475	1434 aa		28	■■■□□ 2.07
TAF1C-206	ENST00000562330	IDI1	Q13907	227 aa		27.99	■■■□□ 2.07
TAF1C-206	ENST00000562330	TET3	O43151	1660 aa		27.97	■■■□□ 2.07
TAF1C-206	ENST00000562330	IQGAP1	P46940	1657 aa		27.97	■■■□□ 2.07
TAF1C-206	ENST00000562330	STAG3	Q9UJ98	1225 aa		27.97	■■■□□ 2.07
TAF1C-206	ENST00000562330	SLIT1	O75093	1534 aa		27.96	■■■□□ 2.07
TAF1C-206	ENST00000562330	RPRD2	Q5VT52	1461 aa	Known RBP	27.95	■■■□□ 2.07
TAF1C-206	ENST00000562330	SCAF11	Q99590	1463 aa	Known RBP	27.95	■■■□□ 2.07
TAF1C-206	ENST00000562330	ARHGAP23	Q9P227	1491 aa		27.95	■■■□□ 2.07
TAF1C-206	ENST00000562330	LTK	P29376	864 aa		27.95	■■■□□ 2.06
TAF1C-206	ENST00000562330	TXNDC2	Q86VQ3	553 aa		27.94	■■■□□ 2.06
TAF1C-206	ENST00000562330	GCC2	Q8IWJ2	1684 aa		27.92	■■■□□ 2.06
TAF1C-206	ENST00000562330	NUP155	O75694	1391 aa		27.91	■■■□□ 2.06
TAF1C-206	ENST00000562330	TMEM2	Q9UHN6	1383 aa		27.91	■■■□□ 2.06
TAF1C-206	ENST00000562330	IQGAP3	Q86VI3	1631 aa		27.91	■■■□□ 2.06
TAF1C-206	ENST00000562330	SLC52A1	Q9NWF4	448 aa		27.9	■■■□□ 2.06
TAF1C-206	ENST00000562330	EID1	Q9Y6B2	187 aa		27.9	■■■□□ 2.06
TAF1C-206	ENST00000562330	CPS1	P31327	1500 aa		27.89	■■■□□ 2.06
TAF1C-206	ENST00000562330	KDM5A	P29375	1690 aa	Known RBP	27.89	■■■□□ 2.06
TAF1C-206	ENST00000562330	ADGRB3	O60242	1522 aa		27.87	■■■□□ 2.05
TAF1C-206	ENST00000562330		E9PCH4	1651 aa		27.87	■■■□□ 2.05
TAF1C-206	ENST00000562330	UBAP1L	F5GYI3	381 aa		27.86	■■■□□ 2.05
TAF1C-206	ENST00000562330	NAIP	Q13075	1403 aa		27.81	■■■□□ 2.04
TAF1C-206	ENST00000562330	STRCP1	A6NGW2	1772 aa		27.8	■■■□□ 2.04
TAF1C-206	ENST00000562330	CHGA	P10645	457 aa	Known RBP	27.76	■■■□□ 2.03
TAF1C-206	ENST00000562330	TMEM131L	A2VDJ0	1609 aa		27.76	■■■□□ 2.03
TAF1C-206	ENST00000562330	MYO5B	Q9ULV0	1848 aa		27.76	■■■□□ 2.03
TAF1C-206	ENST00000562330	LRRC7	Q96NW7	1537 aa		27.73	■■■□□ 2.03
TAF1C-206	ENST00000562330	HFM1	A2PYH4	1435 aa		27.73	■■■□□ 2.03
TAF1C-206	ENST00000562330	ZFYVE9	O95405	1425 aa		27.73	■■■□□ 2.03
TAF1C-206	ENST00000562330	SLC26A8	Q96RN1	970 aa		27.72	■■■□□ 2.03
TAF1C-206	ENST00000562330	SENP3	Q9H4L4	574 aa	Predicted RBP	27.72	■■■□□ 2.03
TAF1C-206	ENST00000562330	RIMS2	Q9UQ26	1411 aa		27.72	■■■□□ 2.03
TAF1C-206	ENST00000562330	BCAN	Q96GW7	911 aa		27.7	■■■□□ 2.02

Retrieved 100 of 20,778 RNA–protein pairs in 162.4 ms