RNA–Protein interactions for RNA: ENST00000561660.1

FANCA-206, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-206ENST00000561660 CROCC2H7BZ55 1655 aa27.92■■■□□ 2.06
FANCA-206ENST00000561660 KIF15Q9NS87 1388 aa27.92■■■□□ 2.06
FANCA-206ENST00000561660 KDM5DQ9BY66 1539 aa27.92■■■□□ 2.06
FANCA-206ENST00000561660 DUOX2Q9NRD8 1548 aa27.91■■■□□ 2.06
FANCA-206ENST00000561660 FBXO31Q5XUX0 539 aaPredicted RBP27.9■■■□□ 2.06
FANCA-206ENST00000561660 CHIC2Q9UKJ5 165 aa27.9■■■□□ 2.06
FANCA-206ENST00000561660 RNF17Q9BXT8 1623 aaKnown RBP27.89■■■□□ 2.06
FANCA-206ENST00000561660 FAM135AQ9P2D6 1515 aa27.89■■■□□ 2.06
FANCA-206ENST00000561660 PPARGC1BQ86YN6 1023 aaKnown RBP27.89■■■□□ 2.06
FANCA-206ENST00000561660 FAM50AQ14320 339 aaKnown RBP27.88■■■□□ 2.05
FANCA-206ENST00000561660 STRCQ7RTU9 1775 aa27.87■■■□□ 2.05
FANCA-206ENST00000561660 EIF2AK4Q9P2K8 1649 aaKnown RBP27.87■■■□□ 2.05
FANCA-206ENST00000561660 MROH1Q8NDA8 1641 aa27.85■■■□□ 2.05
FANCA-206ENST00000561660 PZPP20742 1482 aa27.85■■■□□ 2.05
FANCA-206ENST00000561660 ILDR1Q86SU0 546 aaPredicted RBP27.85■■■□□ 2.05
FANCA-206ENST00000561660 NCOA1Q15788 1441 aa27.84■■■□□ 2.05
FANCA-206ENST00000561660 ABCC3O15438 1527 aa27.83■■■□□ 2.05
FANCA-206ENST00000561660 ERBINQ96RT1 1412 aa27.83■■■□□ 2.05
FANCA-206ENST00000561660 MYO3AQ8NEV4 1616 aa27.82■■■□□ 2.04
FANCA-206ENST00000561660 ANKRD30AQ9BXX3 1397 aa27.82■■■□□ 2.04
FANCA-206ENST00000561660 TNRQ92752 1358 aa27.79■■■□□ 2.04
FANCA-206ENST00000561660 ADGRL2O95490 1459 aa27.78■■■□□ 2.04
FANCA-206ENST00000561660 CAMSAP1Q5T5Y3 1602 aa27.78■■■□□ 2.04
FANCA-206ENST00000561660 CEP170BQ9Y4F5 1589 aaPredicted RBP27.77■■■□□ 2.04
FANCA-206ENST00000561660 DMRT2Q9Y5R5 561 aa27.77■■■□□ 2.04
FANCA-206ENST00000561660 ZNF142P52746 1687 aaPredicted RBP27.76■■■□□ 2.03
FANCA-206ENST00000561660 A2ML1A8K2U0 1454 aa27.75■■■□□ 2.03
FANCA-206ENST00000561660 PTPRTO14522 1441 aa27.74■■■□□ 2.03
FANCA-206ENST00000561660 NCKAP5LQ9HCH0 1330 aa27.73■■■□□ 2.03
FANCA-206ENST00000561660 PRDM15P57071 1507 aaPredicted RBP27.73■■■□□ 2.03
FANCA-206ENST00000561660 ZC3H13Q5T200 1668 aaKnown RBP27.72■■■□□ 2.03
FANCA-206ENST00000561660 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.72■■■□□ 2.031e-6■■□□□ 13.4
FANCA-206ENST00000561660 DEPDC5O75140 1603 aa27.69■■■□□ 2.02
FANCA-206ENST00000561660 CEP152O94986 1710 aa27.69■■■□□ 2.02
FANCA-206ENST00000561660 PLA2R1Q13018 1463 aa27.69■■■□□ 2.02
FANCA-206ENST00000561660 ERVK-7P63135 1459 aa27.67■■■□□ 2.02
FANCA-206ENST00000561660 SPATA31D1Q6ZQQ2 1576 aa27.67■■■□□ 2.02
FANCA-206ENST00000561660 ARHGAP31Q2M1Z3 1444 aa27.66■■■□□ 2.02
FANCA-206ENST00000561660 ANKRD50Q9ULJ7 1429 aa27.65■■■□□ 2.02
FANCA-206ENST00000561660 NLRP1Q9C000 1473 aa27.64■■■□□ 2.02
FANCA-206ENST00000561660 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.64■■■□□ 2.02
FANCA-206ENST00000561660 PKD2Q13563 968 aa27.64■■■□□ 2.02
FANCA-206ENST00000561660 CERKQ8TCT0 537 aa27.64■■■□□ 2.02
FANCA-206ENST00000561660 FBXO41Q8TF61 875 aa27.64■■■□□ 2.02
FANCA-206ENST00000561660 VWDEQ8N2E2 1590 aa27.64■■■□□ 2.01
FANCA-206ENST00000561660 KANK1Q14678 1352 aa27.61■■■□□ 2.01
FANCA-206ENST00000561660 LMTK2Q8IWU2 1503 aa27.61■■■□□ 2.01
FANCA-206ENST00000561660 ROCK1Q13464 1354 aa27.6■■■□□ 2.01
FANCA-206ENST00000561660 ITGAEP38570 1179 aa27.6■■■□□ 2.01
FANCA-206ENST00000561660 UGGT1Q9NYU2 1555 aa27.57■■■□□ 2
FANCA-206ENST00000561660 THEMISQ8N1K5 641 aaPredicted RBP27.57■■■□□ 2
FANCA-206ENST00000561660 RRBP1Q9P2E9 1410 aaKnown RBP27.56■■■□□ 2
FANCA-206ENST00000561660 CFAP65Q6ZU64 1925 aaKnown RBP27.55■■■□□ 2
FANCA-206ENST00000561660 LTBP4Q8N2S1 1624 aa27.54■■■□□ 2
FANCA-206ENST00000561660 ANKLE2Q86XL3 938 aa27.51■■□□□ 1.99
FANCA-206ENST00000561660 NEURL4Q96JN8 1562 aa27.51■■□□□ 1.99
FANCA-206ENST00000561660 ZNF335Q9H4Z2 1342 aaPredicted RBP27.5■■□□□ 1.99
FANCA-206ENST00000561660 EFCAB6Q5THR3 1501 aa27.49■■□□□ 1.99
FANCA-206ENST00000561660 NOS1P29475 1434 aa27.46■■□□□ 1.99
FANCA-206ENST00000561660 UNC13BO14795 1591 aa27.45■■□□□ 1.99
FANCA-206ENST00000561660 IDI1Q13907 227 aa27.45■■□□□ 1.98
FANCA-206ENST00000561660 POLR1AO95602 1720 aaPredicted RBP27.43■■□□□ 1.98
FANCA-206ENST00000561660 UBR1Q8IWV7 1749 aa27.43■■□□□ 1.98
FANCA-206ENST00000561660 MED14O60244 1454 aa27.43■■□□□ 1.98
FANCA-206ENST00000561660 SYNMO15061 1565 aa27.43■■□□□ 1.98
FANCA-206ENST00000561660 NPHP4O75161 1426 aaPredicted RBP27.41■■□□□ 1.98
FANCA-206ENST00000561660 ARHGAP23Q9P227 1491 aa27.39■■□□□ 1.98
FANCA-206ENST00000561660 PIK3C2BO00750 1634 aa27.39■■□□□ 1.98
FANCA-206ENST00000561660 LTKP29376 864 aa27.39■■□□□ 1.98
FANCA-206ENST00000561660 RPRD2Q5VT52 1461 aaKnown RBP27.38■■□□□ 1.97
FANCA-206ENST00000561660 TET3O43151 1660 aa27.38■■□□□ 1.97
FANCA-206ENST00000561660 NUP155O75694 1391 aa27.37■■□□□ 1.97
FANCA-206ENST00000561660 SLIT1O75093 1534 aa27.36■■□□□ 1.97
FANCA-206ENST00000561660 TXNDC2Q86VQ3 553 aa27.34■■□□□ 1.97
FANCA-206ENST00000561660 SLC52A1Q9NWF4 448 aa27.34■■□□□ 1.97
FANCA-206ENST00000561660 IQGAP3Q86VI3 1631 aa27.34■■□□□ 1.97
FANCA-206ENST00000561660 TMEM2Q9UHN6 1383 aa27.34■■□□□ 1.97
FANCA-206ENST00000561660 NAIPQ13075 1403 aa27.33■■□□□ 1.97
FANCA-206ENST00000561660 SCAF11Q99590 1463 aaKnown RBP27.32■■□□□ 1.96
FANCA-206ENST00000561660 STAG3Q9UJ98 1225 aa27.32■■□□□ 1.96
FANCA-206ENST00000561660 IQSEC2Q5JU85 1478 aa27.32■■□□□ 1.96
FANCA-206ENST00000561660 GCC2Q8IWJ2 1684 aa27.3■■□□□ 1.96
FANCA-206ENST00000561660 IQGAP1P46940 1657 aa27.3■■□□□ 1.96
FANCA-206ENST00000561660 E9PCH4 1651 aa27.29■■□□□ 1.96
FANCA-206ENST00000561660 KDM5AP29375 1690 aaKnown RBP27.27■■□□□ 1.96
FANCA-206ENST00000561660 ADGRB3O60242 1522 aa27.26■■□□□ 1.96
FANCA-206ENST00000561660 EID1Q9Y6B2 187 aa27.26■■□□□ 1.95
FANCA-206ENST00000561660 HFM1A2PYH4 1435 aa27.24■■□□□ 1.95
FANCA-206ENST00000561660 CPS1P31327 1500 aa27.21■■□□□ 1.95
FANCA-206ENST00000561660 ZFYVE9O95405 1425 aa27.17■■□□□ 1.94
FANCA-206ENST00000561660 TMEM131LA2VDJ0 1609 aa27.17■■□□□ 1.94
FANCA-206ENST00000561660 UBAP1LF5GYI3 381 aa27.16■■□□□ 1.94
FANCA-206ENST00000561660 STRCP1A6NGW2 1772 aa27.16■■□□□ 1.94
FANCA-206ENST00000561660 CHGAP10645 457 aaKnown RBP27.14■■□□□ 1.94
FANCA-206ENST00000561660 RIMS2Q9UQ26 1411 aa27.14■■□□□ 1.93
FANCA-206ENST00000561660 MYO5BQ9ULV0 1848 aa27.12■■□□□ 1.93
FANCA-206ENST00000561660 SLC26A8Q96RN1 970 aa27.12■■□□□ 1.93
FANCA-206ENST00000561660 LRRC7Q96NW7 1537 aa27.11■■□□□ 1.93
FANCA-206ENST00000561660 TRIM52Q96A61 297 aa27.11■■□□□ 1.93
FANCA-206ENST00000561660 SENP3Q9H4L4 574 aaPredicted RBP27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms