RNA–Protein interactions for RNA: ENST00000561255.5

CRTC3-213, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 5

Gene CRTC3, Length 520 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-213ENST00000561255 DHX29Q7Z478 1369 aaKnown RBP19.64■□□□□ 0.73
CRTC3-213ENST00000561255 TNRQ92752 1358 aa19.64■□□□□ 0.73
CRTC3-213ENST00000561255 FAM135AQ9P2D6 1515 aa19.63■□□□□ 0.73
CRTC3-213ENST00000561255 MBD5Q9P267 1494 aa19.63■□□□□ 0.73
CRTC3-213ENST00000561255 CHIC1Q5VXU3 224 aa19.63■□□□□ 0.73
CRTC3-213ENST00000561255 VWDEQ8N2E2 1590 aa19.61■□□□□ 0.73
CRTC3-213ENST00000561255 PZPP20742 1482 aa19.61■□□□□ 0.73
CRTC3-213ENST00000561255 MTUS2Q5JR59 1369 aa19.6■□□□□ 0.73
CRTC3-213ENST00000561255 ZNF644Q9H582 1327 aaPredicted RBP19.6■□□□□ 0.73
CRTC3-213ENST00000561255 FBXO31Q5XUX0 539 aaPredicted RBP19.6■□□□□ 0.73
CRTC3-213ENST00000561255 ANKLE2Q86XL3 938 aa19.6■□□□□ 0.73
CRTC3-213ENST00000561255 TIAM1Q13009 1591 aa19.59■□□□□ 0.73
CRTC3-213ENST00000561255 KDM5DQ9BY66 1539 aa19.59■□□□□ 0.73
CRTC3-213ENST00000561255 MED14O60244 1454 aa19.59■□□□□ 0.73
CRTC3-213ENST00000561255 ALKQ9UM73 1620 aa19.58■□□□□ 0.73
CRTC3-213ENST00000561255 THEMISQ8N1K5 641 aaPredicted RBP19.58■□□□□ 0.72
CRTC3-213ENST00000561255 DEPDC5O75140 1603 aa19.58■□□□□ 0.72
CRTC3-213ENST00000561255 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.57■□□□□ 0.72
CRTC3-213ENST00000561255 NLRP1Q9C000 1473 aa19.57■□□□□ 0.72
CRTC3-213ENST00000561255 KIF3BO15066 747 aa19.56■□□□□ 0.72
CRTC3-213ENST00000561255 PHF23Q9BUL5 403 aaPredicted RBP19.56■□□□□ 0.72
CRTC3-213ENST00000561255 MIA2Q96PC5 1412 aa19.56■□□□□ 0.72
CRTC3-213ENST00000561255 NPHP4O75161 1426 aaPredicted RBP19.55■□□□□ 0.72
CRTC3-213ENST00000561255 WASHC2CQ9Y4E1 1318 aa19.54■□□□□ 0.72
CRTC3-213ENST00000561255 UGGT1Q9NYU2 1555 aa19.54■□□□□ 0.72
CRTC3-213ENST00000561255 EHBP1L1Q8N3D4 1523 aa19.52■□□□□ 0.72
CRTC3-213ENST00000561255 CCDC141Q6ZP82 1450 aa19.52■□□□□ 0.72
CRTC3-213ENST00000561255 CEP162Q5TB80 1403 aa19.51■□□□□ 0.71
CRTC3-213ENST00000561255 IQGAP1P46940 1657 aa19.51■□□□□ 0.71
CRTC3-213ENST00000561255 RSPH4AQ5TD94 716 aa19.5■□□□□ 0.71
CRTC3-213ENST00000561255 LRRC7Q96NW7 1537 aa19.48■□□□□ 0.71
CRTC3-213ENST00000561255 SYNMO15061 1565 aa19.48■□□□□ 0.71
CRTC3-213ENST00000561255 RNF17Q9BXT8 1623 aaKnown RBP19.47■□□□□ 0.71
CRTC3-213ENST00000561255 STRCP1A6NGW2 1772 aa19.47■□□□□ 0.71
CRTC3-213ENST00000561255 CAMSAP2Q08AD1 1489 aa19.45■□□□□ 0.7
CRTC3-213ENST00000561255 ARHGEF5Q12774 1597 aa19.42■□□□□ 0.7
CRTC3-213ENST00000561255 ZC3H13Q5T200 1668 aaKnown RBP19.42■□□□□ 0.7
CRTC3-213ENST00000561255 NCOA2Q15596 1464 aa19.4■□□□□ 0.7
CRTC3-213ENST00000561255 ABCC3O15438 1527 aa19.4■□□□□ 0.7
CRTC3-213ENST00000561255 TSPY4P0CV99 314 aa19.39■□□□□ 0.69
CRTC3-213ENST00000561255 TSPY10P0CW01 314 aa19.39■□□□□ 0.69
CRTC3-213ENST00000561255 ERVK-7P63135 1459 aa19.38■□□□□ 0.69
CRTC3-213ENST00000561255 SENP3Q9H4L4 574 aaPredicted RBP19.38■□□□□ 0.69
CRTC3-213ENST00000561255 RGS17Q9UGC6 210 aaPredicted RBP19.38■□□□□ 0.69
CRTC3-213ENST00000561255 UBR1Q8IWV7 1749 aa19.36■□□□□ 0.69
CRTC3-213ENST00000561255 SCAF11Q99590 1463 aaKnown RBP19.35■□□□□ 0.69
CRTC3-213ENST00000561255 EIF2AK4Q9P2K8 1649 aaKnown RBP19.35■□□□□ 0.69
CRTC3-213ENST00000561255 MAST1Q9Y2H9 1570 aa19.34■□□□□ 0.69
CRTC3-213ENST00000561255 ARHGAP23Q9P227 1491 aa19.33■□□□□ 0.68
CRTC3-213ENST00000561255 XIRP1Q702N8 1843 aaKnown RBP19.32■□□□□ 0.68
CRTC3-213ENST00000561255 SLIT1O75093 1534 aa19.32■□□□□ 0.68
CRTC3-213ENST00000561255 MROH1Q8NDA8 1641 aa19.32■□□□□ 0.68
CRTC3-213ENST00000561255 LTKP29376 864 aa19.3■□□□□ 0.68
CRTC3-213ENST00000561255 FAM135BQ49AJ0 1406 aa19.3■□□□□ 0.68
CRTC3-213ENST00000561255 TXNDC2Q86VQ3 553 aa19.29■□□□□ 0.68
CRTC3-213ENST00000561255 CEP152O94986 1710 aa19.28■□□□□ 0.68
CRTC3-213ENST00000561255 CFAP65Q6ZU64 1925 aaKnown RBP19.27■□□□□ 0.68
CRTC3-213ENST00000561255 ARHGAP31Q2M1Z3 1444 aa19.26■□□□□ 0.67
CRTC3-213ENST00000561255 EID1Q9Y6B2 187 aa19.25■□□□□ 0.67
CRTC3-213ENST00000561255 POTEAQ6S8J7 498 aa19.24■□□□□ 0.67
CRTC3-213ENST00000561255 DUOX2Q9NRD8 1548 aa19.23■□□□□ 0.67
CRTC3-213ENST00000561255 TMEM2Q9UHN6 1383 aa19.21■□□□□ 0.67
CRTC3-213ENST00000561255 PRDM15P57071 1507 aaPredicted RBP19.21■□□□□ 0.67
CRTC3-213ENST00000561255 TMEM94Q12767 1356 aa19.2■□□□□ 0.66
CRTC3-213ENST00000561255 LRRC9Q6ZRR7 1453 aa19.2■□□□□ 0.66
CRTC3-213ENST00000561255 PIK3C2BO00750 1634 aa19.19■□□□□ 0.66
CRTC3-213ENST00000561255 KDM5AP29375 1690 aaKnown RBP19.19■□□□□ 0.66
CRTC3-213ENST00000561255 ROBO1Q9Y6N7 1651 aa19.19■□□□□ 0.66
CRTC3-213ENST00000561255 KCNA6P17658 529 aa19.18■□□□□ 0.66
CRTC3-213ENST00000561255 MYOM3Q5VTT5 1437 aa19.17■□□□□ 0.66
CRTC3-213ENST00000561255 MAP3K1Q13233 1512 aa19.17■□□□□ 0.66
CRTC3-213ENST00000561255 ERBINQ96RT1 1412 aa19.16■□□□□ 0.66
CRTC3-213ENST00000561255 TET3O43151 1660 aa19.15■□□□□ 0.66
CRTC3-213ENST00000561255 EFCAB6Q5THR3 1501 aa19.15■□□□□ 0.66
CRTC3-213ENST00000561255 STAG3Q9UJ98 1225 aa19.14■□□□□ 0.65
CRTC3-213ENST00000561255 KIF15Q9NS87 1388 aa19.14■□□□□ 0.65
CRTC3-213ENST00000561255 PROSER2Q86WR7 435 aaPredicted RBP19.13■□□□□ 0.65
CRTC3-213ENST00000561255 NKTRP30414 1462 aaKnown RBP19.12■□□□□ 0.65
CRTC3-213ENST00000561255 NWD1Q149M9 1564 aa19.11■□□□□ 0.65
CRTC3-213ENST00000561255 IDI1Q13907 227 aa19.1■□□□□ 0.65
CRTC3-213ENST00000561255 SLC26A8Q96RN1 970 aa19.1■□□□□ 0.65
CRTC3-213ENST00000561255 LMTK2Q8IWU2 1503 aa19.1■□□□□ 0.65
CRTC3-213ENST00000561255 KANK1Q14678 1352 aa19.09■□□□□ 0.65
CRTC3-213ENST00000561255 VPS8Q8N3P4 1428 aa19.08■□□□□ 0.65
CRTC3-213ENST00000561255 SETD1AO15047 1707 aaKnown RBP19.08■□□□□ 0.65
CRTC3-213ENST00000561255 PHLPP1O60346 1717 aa19.08■□□□□ 0.65
CRTC3-213ENST00000561255 MSH6P52701 1360 aa19.08■□□□□ 0.65
CRTC3-213ENST00000561255 JCADQ9P266 1359 aa19.08■□□□□ 0.65
CRTC3-213ENST00000561255 CROCC2H7BZ55 1655 aa19.08■□□□□ 0.65
CRTC3-213ENST00000561255 RBM33Q96EV2 1170 aaKnown RBP19.08■□□□□ 0.64
CRTC3-213ENST00000561255 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.08■□□□□ 0.64
CRTC3-213ENST00000561255 KANK4Q5T7N3 995 aaPredicted RBP19.07■□□□□ 0.64
CRTC3-213ENST00000561255 RRP7BPQ9NSQ0 103 aa19.07■□□□□ 0.64
CRTC3-213ENST00000561255 SLAIN2Q9P270 581 aa19.07■□□□□ 0.64
CRTC3-213ENST00000561255 ABCC5O15440 1437 aa19.07■□□□□ 0.64
CRTC3-213ENST00000561255 ADGRB3O60242 1522 aa19.05■□□□□ 0.64
CRTC3-213ENST00000561255 NOS1P29475 1434 aa19.04■□□□□ 0.64
CRTC3-213ENST00000561255 SLC52A1Q9NWF4 448 aa19.02■□□□□ 0.64
CRTC3-213ENST00000561255 COL16A1Q07092 1604 aaPredicted RBP19.02■□□□□ 0.64
CRTC3-213ENST00000561255 DAPK1P53355 1430 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms