RNA–Protein interactions for RNA: ENST00000561255.5

CRTC3-213, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 5

Gene CRTC3, Length 520 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-213ENST00000561255 NISCHQ9Y2I1 1504 aa30.88■■■□□ 2.53
CRTC3-213ENST00000561255 ABCC9O60706 1549 aa28.31■■■□□ 2.12
CRTC3-213ENST00000561255 CCDC180Q9P1Z9 1646 aa27.93■■■□□ 2.06
CRTC3-213ENST00000561255 DNAJC5BQ9UF47 199 aa26.97■■□□□ 1.91
CRTC3-213ENST00000561255 RB1CC1Q8TDY2 1594 aa26.8■■□□□ 1.88
CRTC3-213ENST00000561255 NACADO15069 1562 aa26.52■■□□□ 1.84
CRTC3-213ENST00000561255 PABPN1Q86U42 306 aaKnown RBP eCLIP26.27■■□□□ 1.8
CRTC3-213ENST00000561255 DCAF8L2P0C7V8 631 aa26.18■■□□□ 1.78
CRTC3-213ENST00000561255 UNC13AQ9UPW8 1703 aa26.17■■□□□ 1.78
CRTC3-213ENST00000561255 MYO15BQ96JP2 1530 aa26.04■■□□□ 1.76
CRTC3-213ENST00000561255 BICRAQ9NZM4 1560 aa26.03■■□□□ 1.76
CRTC3-213ENST00000561255 SHROOM4Q9ULL8 1493 aa25.69■■□□□ 1.7
CRTC3-213ENST00000561255 CC2D2AQ9P2K1 1620 aa25.58■■□□□ 1.69
CRTC3-213ENST00000561255 CECR2Q9BXF3 1484 aa25.58■■□□□ 1.69
CRTC3-213ENST00000561255 DCAF1Q9Y4B6 1507 aa25.53■■□□□ 1.68
CRTC3-213ENST00000561255 ZCCHC6Q5VYS8 1495 aaKnown RBP25.49■■□□□ 1.67
CRTC3-213ENST00000561255 EIF4G1Q04637 1599 aaKnown RBP25.43■■□□□ 1.66
CRTC3-213ENST00000561255 SCRIBQ14160 1630 aa25.36■■□□□ 1.65
CRTC3-213ENST00000561255 DNAJC5Q9H3Z4 198 aa25.14■■□□□ 1.62
CRTC3-213ENST00000561255 CUX2O14529 1486 aa24.65■■□□□ 1.54
CRTC3-213ENST00000561255 NCAPD3P42695 1498 aa24.49■■□□□ 1.51
CRTC3-213ENST00000561255 ERCC6Q03468 1493 aa24.49■■□□□ 1.51
CRTC3-213ENST00000561255 ATAD2BQ9ULI0 1458 aa24.32■■□□□ 1.48
CRTC3-213ENST00000561255 HMGXB3Q12766 1538 aa24.26■■□□□ 1.47
CRTC3-213ENST00000561255 SMARCA2P51531 1590 aa24.25■■□□□ 1.47
CRTC3-213ENST00000561255 NESP48681 1621 aa24.19■■□□□ 1.46
CRTC3-213ENST00000561255 SMARCA4P51532 1647 aa24.18■■□□□ 1.46
CRTC3-213ENST00000561255 THOC2Q8NI27 1593 aaKnown RBP24.07■■□□□ 1.44
CRTC3-213ENST00000561255 BAZ1BQ9UIG0 1483 aaKnown RBP24.06■■□□□ 1.44
CRTC3-213ENST00000561255 BAZ1AQ9NRL2 1556 aaPredicted RBP24■■□□□ 1.43
CRTC3-213ENST00000561255 LAMC3Q9Y6N6 1575 aa24■■□□□ 1.43
CRTC3-213ENST00000561255 PEG3Q9GZU2 1588 aa23.99■■□□□ 1.43
CRTC3-213ENST00000561255 PDS5BQ9NTI5 1447 aa23.88■■□□□ 1.41
CRTC3-213ENST00000561255 KIF21AQ7Z4S6 1674 aa23.88■■□□□ 1.41
CRTC3-213ENST00000561255 TRIM41Q8WV44 630 aa23.78■■□□□ 1.4
CRTC3-213ENST00000561255 MROH2BQ7Z745 1585 aa23.77■■□□□ 1.4
CRTC3-213ENST00000561255 CADPSQ9ULU8 1353 aa23.71■■□□□ 1.39
CRTC3-213ENST00000561255 MRC2Q9UBG0 1479 aa23.68■■□□□ 1.38
CRTC3-213ENST00000561255 WDR62O43379 1518 aa23.65■■□□□ 1.38
CRTC3-213ENST00000561255 CEP164Q9UPV0 1460 aa23.49■■□□□ 1.35
CRTC3-213ENST00000561255 WIZO95785 1651 aa23.45■■□□□ 1.34
CRTC3-213ENST00000561255 OSCARQ8IYS5 282 aa23.42■■□□□ 1.34
CRTC3-213ENST00000561255 FANCD2Q9BXW9 1451 aa23.42■■□□□ 1.34
CRTC3-213ENST00000561255 CFTRP13569 1480 aa23.35■■□□□ 1.33
CRTC3-213ENST00000561255 URB2Q14146 1524 aaKnown RBP23.25■■□□□ 1.31
CRTC3-213ENST00000561255 RIMBP3CA6NJZ7 1639 aa23.16■■□□□ 1.3
CRTC3-213ENST00000561255 RIMBP3BA6NNM3 1639 aa23.16■■□□□ 1.3
CRTC3-213ENST00000561255 RIMBP3Q9UFD9 1639 aa23.16■■□□□ 1.3
CRTC3-213ENST00000561255 TOP2AP11388 1531 aaKnown RBP23.15■■□□□ 1.3
CRTC3-213ENST00000561255 RSF1Q96T23 1441 aaPredicted RBP23.12■■□□□ 1.29
CRTC3-213ENST00000561255 PRDM2Q13029 1718 aa23.07■■□□□ 1.28
CRTC3-213ENST00000561255 IFT140Q96RY7 1462 aa23.05■■□□□ 1.28
CRTC3-213ENST00000561255 ARHGEF11O15085 1522 aa23.04■■□□□ 1.28
CRTC3-213ENST00000561255 ZNF608Q9ULD9 1512 aaPredicted RBP23.03■■□□□ 1.28
CRTC3-213ENST00000561255 TOPBP1Q92547 1522 aa22.92■■□□□ 1.26
CRTC3-213ENST00000561255 EIF4G3O43432 1585 aaKnown RBP22.89■■□□□ 1.26
CRTC3-213ENST00000561255 CCDC88BA6NC98 1476 aa22.89■■□□□ 1.25
CRTC3-213ENST00000561255 ABCC8Q09428 1581 aa22.89■■□□□ 1.25
CRTC3-213ENST00000561255 CYB5RLQ6IPT4 315 aa22.88■■□□□ 1.25
CRTC3-213ENST00000561255 DNMBPQ6XZF7 1577 aa22.82■■□□□ 1.24
CRTC3-213ENST00000561255 CHD1O14646 1710 aa22.79■■□□□ 1.24
CRTC3-213ENST00000561255 TARBP1Q13395 1621 aaKnown RBP22.78■■□□□ 1.24
CRTC3-213ENST00000561255 ARAP1Q96P48 1450 aa22.78■■□□□ 1.24
CRTC3-213ENST00000561255 AQRO60306 1485 aaKnown RBP eCLIP22.77■■□□□ 1.247e-7■■■■□ 24.7
CRTC3-213ENST00000561255 TRHP20396 242 aaPredicted RBP22.75■■□□□ 1.23
CRTC3-213ENST00000561255 FBLN2P98095 1184 aa22.68■■□□□ 1.22
CRTC3-213ENST00000561255 POLA1P09884 1462 aaPredicted RBP22.66■■□□□ 1.22
CRTC3-213ENST00000561255 RAD54L2Q9Y4B4 1467 aa22.57■■□□□ 1.2
CRTC3-213ENST00000561255 CLASP1Q7Z460 1538 aa22.56■■□□□ 1.2
CRTC3-213ENST00000561255 SOGA1O94964 1423 aa22.56■■□□□ 1.2
CRTC3-213ENST00000561255 TDRD9Q8NDG6 1382 aaKnown RBP22.55■■□□□ 1.2
CRTC3-213ENST00000561255 WDR97A6NE52 1622 aa22.55■■□□□ 1.2
CRTC3-213ENST00000561255 SNAPC4Q5SXM2 1469 aa22.53■■□□□ 1.2
CRTC3-213ENST00000561255 SYNJ1O43426 1573 aa22.5■■□□□ 1.19
CRTC3-213ENST00000561255 MAGI1Q96QZ7 1491 aaPredicted RBP22.47■■□□□ 1.19
CRTC3-213ENST00000561255 CHMP7Q8WUX9 453 aaPredicted RBP22.47■■□□□ 1.19
CRTC3-213ENST00000561255 FGD5Q6ZNL6 1462 aa22.45■■□□□ 1.18
CRTC3-213ENST00000561255 AEBP2Q6ZN18 517 aaPredicted RBP22.44■■□□□ 1.18
CRTC3-213ENST00000561255 GRIN2BQ13224 1484 aa22.42■■□□□ 1.18
CRTC3-213ENST00000561255 SYNJ2O15056 1496 aa22.41■■□□□ 1.18
CRTC3-213ENST00000561255 CUX1P39880 1505 aa22.36■■□□□ 1.17
CRTC3-213ENST00000561255 GAPVD1Q14C86 1478 aa22.34■■□□□ 1.17
CRTC3-213ENST00000561255 PBRM1Q86U86 1689 aa22.29■■□□□ 1.16
CRTC3-213ENST00000561255 ABCA10Q8WWZ4 1543 aa22.2■■□□□ 1.14
CRTC3-213ENST00000561255 ABCA5Q8WWZ7 1642 aa22.2■■□□□ 1.14
CRTC3-213ENST00000561255 ERCC6L2Q5T890 1561 aa22.14■■□□□ 1.13
CRTC3-213ENST00000561255 GRIN2AQ12879 1464 aa22.13■■□□□ 1.13
CRTC3-213ENST00000561255 CEP170Q5SW79 1584 aa22.08■■□□□ 1.13
CRTC3-213ENST00000561255 NUP160Q12769 1436 aa22.08■■□□□ 1.13
CRTC3-213ENST00000561255 ADAMTS12P58397 1594 aa22.05■■□□□ 1.12
CRTC3-213ENST00000561255 SHROOM2Q13796 1616 aa22.04■■□□□ 1.12
CRTC3-213ENST00000561255 WRNQ14191 1432 aaPredicted RBP eCLIP22.01■■□□□ 1.11
CRTC3-213ENST00000561255 KIF13AQ9H1H9 1805 aa21.99■■□□□ 1.11
CRTC3-213ENST00000561255 FHAD1B1AJZ9 1412 aa21.98■■□□□ 1.11
CRTC3-213ENST00000561255 ERICH3Q5RHP9 1530 aa21.91■■□□□ 1.1
CRTC3-213ENST00000561255 BIVM-ERCC5R4GMW8 1640 aa21.91■■□□□ 1.1
CRTC3-213ENST00000561255 TOP2BQ02880 1626 aa21.9■■□□□ 1.1
CRTC3-213ENST00000561255 PRG4Q92954 1404 aaPredicted RBP21.89■■□□□ 1.09
CRTC3-213ENST00000561255 JPH4Q96JJ6 628 aa21.84■■□□□ 1.09
CRTC3-213ENST00000561255 ABCC10Q5T3U5 1492 aa21.83■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms