RNA–Protein interactions for RNA: ENST00000560496.5

SNRPA1-212, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-212ENST00000560496 LOC105371045A0A1W2PR82 267 aa16.25■□□□□ 0.19
SNRPA1-212ENST00000560496 MROH1Q8NDA8 1641 aa16.25■□□□□ 0.19
SNRPA1-212ENST00000560496 DHX29Q7Z478 1369 aaKnown RBP16.25■□□□□ 0.19
SNRPA1-212ENST00000560496 PLA2R1Q13018 1463 aa16.24■□□□□ 0.19
SNRPA1-212ENST00000560496 DNMT1P26358 1616 aaKnown RBP16.23■□□□□ 0.19
SNRPA1-212ENST00000560496 TCOF1Q13428 1488 aaKnown RBP16.22■□□□□ 0.19
SNRPA1-212ENST00000560496 MYOM3Q5VTT5 1437 aa16.22■□□□□ 0.19
SNRPA1-212ENST00000560496 CERKQ8TCT0 537 aa16.22■□□□□ 0.19
SNRPA1-212ENST00000560496 PZPP20742 1482 aa16.22■□□□□ 0.19
SNRPA1-212ENST00000560496 CEP152O94986 1710 aa16.21■□□□□ 0.19
SNRPA1-212ENST00000560496 GGT6Q6P531 493 aa16.2■□□□□ 0.18
SNRPA1-212ENST00000560496 NEURL4Q96JN8 1562 aa16.2■□□□□ 0.18
SNRPA1-212ENST00000560496 MIA2Q96PC5 1412 aa16.19■□□□□ 0.18
SNRPA1-212ENST00000560496 PTPN23Q9H3S7 1636 aa16.19■□□□□ 0.18
SNRPA1-212ENST00000560496 A2ML1A8K2U0 1454 aa16.19■□□□□ 0.18
SNRPA1-212ENST00000560496 MSH5O43196 834 aa16.19■□□□□ 0.18
SNRPA1-212ENST00000560496 ABCC3O15438 1527 aa16.18■□□□□ 0.18
SNRPA1-212ENST00000560496 KANK4Q5T7N3 995 aaPredicted RBP16.17■□□□□ 0.18
SNRPA1-212ENST00000560496 PPP6R1Q9UPN7 881 aa16.17■□□□□ 0.18
SNRPA1-212ENST00000560496 DMRT2Q9Y5R5 561 aa16.17■□□□□ 0.18
SNRPA1-212ENST00000560496 IQSEC2Q5JU85 1478 aa16.16■□□□□ 0.18
SNRPA1-212ENST00000560496 SHANK2Q9UPX8 1470 aa16.16■□□□□ 0.18
SNRPA1-212ENST00000560496 SPATA31D1Q6ZQQ2 1576 aa16.16■□□□□ 0.18
SNRPA1-212ENST00000560496 DEPDC5O75140 1603 aa16.16■□□□□ 0.18
SNRPA1-212ENST00000560496 PRDM15P57071 1507 aaPredicted RBP16.15■□□□□ 0.18
SNRPA1-212ENST00000560496 RSPH4AQ5TD94 716 aa16.14■□□□□ 0.17
SNRPA1-212ENST00000560496 DUOX2Q9NRD8 1548 aa16.14■□□□□ 0.17
SNRPA1-212ENST00000560496 KIF3BO15066 747 aa16.13■□□□□ 0.17
SNRPA1-212ENST00000560496 TNRQ92752 1358 aa16.12■□□□□ 0.17
SNRPA1-212ENST00000560496 NLRP1Q9C000 1473 aa16.1■□□□□ 0.17
SNRPA1-212ENST00000560496 UBR1Q8IWV7 1749 aa16.09■□□□□ 0.17
SNRPA1-212ENST00000560496 NCKAP5LQ9HCH0 1330 aa16.09■□□□□ 0.17
SNRPA1-212ENST00000560496 ABCC5O15440 1437 aa16.09■□□□□ 0.17
SNRPA1-212ENST00000560496 FGD6Q6ZV73 1430 aa16.09■□□□□ 0.17
SNRPA1-212ENST00000560496 ERVK-7P63135 1459 aa16.09■□□□□ 0.17
SNRPA1-212ENST00000560496 UGGT1Q9NYU2 1555 aa16.09■□□□□ 0.17
SNRPA1-212ENST00000560496 DAPK1P53355 1430 aa16.08■□□□□ 0.16
SNRPA1-212ENST00000560496 ERBINQ96RT1 1412 aa16.08■□□□□ 0.16
SNRPA1-212ENST00000560496 TSPY4P0CV99 314 aa16.07■□□□□ 0.16
SNRPA1-212ENST00000560496 TSPY10P0CW01 314 aa16.07■□□□□ 0.16
SNRPA1-212ENST00000560496 IQGAP1P46940 1657 aa16.07■□□□□ 0.16
SNRPA1-212ENST00000560496 ZNF335Q9H4Z2 1342 aaPredicted RBP16.06■□□□□ 0.16
SNRPA1-212ENST00000560496 FBXO31Q5XUX0 539 aaPredicted RBP16.06■□□□□ 0.16
SNRPA1-212ENST00000560496 VWDEQ8N2E2 1590 aa16.05■□□□□ 0.16
SNRPA1-212ENST00000560496 PKD2Q13563 968 aa16.05■□□□□ 0.16
SNRPA1-212ENST00000560496 KIF15Q9NS87 1388 aa16.04■□□□□ 0.16
SNRPA1-212ENST00000560496 WASHC2CQ9Y4E1 1318 aa16.04■□□□□ 0.16
SNRPA1-212ENST00000560496 CFAP65Q6ZU64 1925 aaKnown RBP16.03■□□□□ 0.16
SNRPA1-212ENST00000560496 MED14O60244 1454 aa16.03■□□□□ 0.16
SNRPA1-212ENST00000560496 STRCP1A6NGW2 1772 aa16.03■□□□□ 0.16
SNRPA1-212ENST00000560496 ADGRL2O95490 1459 aa16.01■□□□□ 0.15
SNRPA1-212ENST00000560496 CPS1P31327 1500 aa16■□□□□ 0.15
SNRPA1-212ENST00000560496 LMTK2Q8IWU2 1503 aa16■□□□□ 0.15
SNRPA1-212ENST00000560496 PIK3C2BO00750 1634 aa16■□□□□ 0.15
SNRPA1-212ENST00000560496 ARHGAP31Q2M1Z3 1444 aa16■□□□□ 0.15
SNRPA1-212ENST00000560496 SYNMO15061 1565 aa16■□□□□ 0.15
SNRPA1-212ENST00000560496 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16■□□□□ 0.15
SNRPA1-212ENST00000560496 KDM5AP29375 1690 aaKnown RBP15.99■□□□□ 0.15
SNRPA1-212ENST00000560496 EFCAB6Q5THR3 1501 aa15.99■□□□□ 0.15
SNRPA1-212ENST00000560496 ALKQ9UM73 1620 aa15.97■□□□□ 0.15
SNRPA1-212ENST00000560496 NPHP4O75161 1426 aaPredicted RBP15.96■□□□□ 0.15
SNRPA1-212ENST00000560496 SLIT1O75093 1534 aa15.96■□□□□ 0.15
SNRPA1-212ENST00000560496 ARHGAP23Q9P227 1491 aa15.96■□□□□ 0.14
SNRPA1-212ENST00000560496 UNC13BO14795 1591 aa15.93■□□□□ 0.14
SNRPA1-212ENST00000560496 APLP2Q06481 763 aa15.93■□□□□ 0.14
SNRPA1-212ENST00000560496 GCC2Q8IWJ2 1684 aa15.92■□□□□ 0.14
SNRPA1-212ENST00000560496 XIRP1Q702N8 1843 aaKnown RBP15.92■□□□□ 0.14
SNRPA1-212ENST00000560496 ANKRD30AQ9BXX3 1397 aa15.92■□□□□ 0.14
SNRPA1-212ENST00000560496 TET3O43151 1660 aa15.92■□□□□ 0.14
SNRPA1-212ENST00000560496 SCAF11Q99590 1463 aaKnown RBP15.91■□□□□ 0.14
SNRPA1-212ENST00000560496 RRP7BPQ9NSQ0 103 aa15.91■□□□□ 0.14
SNRPA1-212ENST00000560496 ADGRB3O60242 1522 aa15.9■□□□□ 0.14
SNRPA1-212ENST00000560496 THEMISQ8N1K5 641 aaPredicted RBP15.9■□□□□ 0.14
SNRPA1-212ENST00000560496 MYO5BQ9ULV0 1848 aa15.89■□□□□ 0.13
SNRPA1-212ENST00000560496 ANKLE2Q86XL3 938 aa15.89■□□□□ 0.13
SNRPA1-212ENST00000560496 NOS1P29475 1434 aa15.88■□□□□ 0.13
SNRPA1-212ENST00000560496 LRRC7Q96NW7 1537 aa15.87■□□□□ 0.13
SNRPA1-212ENST00000560496 KANK1Q14678 1352 aa15.87■□□□□ 0.13
SNRPA1-212ENST00000560496 IQGAP3Q86VI3 1631 aa15.86■□□□□ 0.13
SNRPA1-212ENST00000560496 E9PCH4 1651 aa15.86■□□□□ 0.13
SNRPA1-212ENST00000560496 UBAP1LF5GYI3 381 aa15.85■□□□□ 0.13
SNRPA1-212ENST00000560496 CHIC2Q9UKJ5 165 aa15.85■□□□□ 0.13
SNRPA1-212ENST00000560496 ANKRD50Q9ULJ7 1429 aa15.85■□□□□ 0.13
SNRPA1-212ENST00000560496 RPRD2Q5VT52 1461 aaKnown RBP15.84■□□□□ 0.13
SNRPA1-212ENST00000560496 DISP3Q9P2K9 1392 aa15.84■□□□□ 0.13
SNRPA1-212ENST00000560496 NWD1Q149M9 1564 aa15.83■□□□□ 0.12
SNRPA1-212ENST00000560496 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.82■□□□□ 0.12
SNRPA1-212ENST00000560496 MED1Q15648 1581 aaPredicted RBP15.82■□□□□ 0.12
SNRPA1-212ENST00000560496 TMEM131LA2VDJ0 1609 aa15.81■□□□□ 0.12
SNRPA1-212ENST00000560496 TMEM2Q9UHN6 1383 aa15.81■□□□□ 0.12
SNRPA1-212ENST00000560496 LTKP29376 864 aa15.8■□□□□ 0.12
SNRPA1-212ENST00000560496 FAM50AQ14320 339 aaKnown RBP15.79■□□□□ 0.12
SNRPA1-212ENST00000560496 ROCK1Q13464 1354 aa15.77■□□□□ 0.12
SNRPA1-212ENST00000560496 ILDR2Q71H61 639 aa15.77■□□□□ 0.12
SNRPA1-212ENST00000560496 ZFYVE9O95405 1425 aa15.77■□□□□ 0.11
SNRPA1-212ENST00000560496 PIAS4Q8N2W9 510 aaPredicted RBP15.76■□□□□ 0.11
SNRPA1-212ENST00000560496 SPHKAPQ2M3C7 1700 aa15.75■□□□□ 0.11
SNRPA1-212ENST00000560496 IDI1Q13907 227 aa15.74■□□□□ 0.11
SNRPA1-212ENST00000560496 CHD2O14647 1828 aaKnown RBP15.73■□□□□ 0.11
SNRPA1-212ENST00000560496 NKTRP30414 1462 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms