RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787	ARAP3	Q8WWN8	1544 aa		11.53	□□□□□ -0.56
MARK3-215	ENST00000558787	EFCAB5	A4FU69	1503 aa		11.52	□□□□□ -0.57
MARK3-215	ENST00000558787	CDK13	Q14004	1512 aa	Known RBP	11.5	□□□□□ -0.57
MARK3-215	ENST00000558787	GOLGA2	Q08379	1002 aa		11.5	□□□□□ -0.57
MARK3-215	ENST00000558787	PSEN1	P49768	467 aa		11.49	□□□□□ -0.57
MARK3-215	ENST00000558787	IRX5	P78411	483 aa	Predicted RBP	11.49	□□□□□ -0.57
MARK3-215	ENST00000558787	OCEL1	Q9H607	264 aa		11.49	□□□□□ -0.57
MARK3-215	ENST00000558787	PHLDB1	Q86UU1	1377 aa		11.49	□□□□□ -0.57
MARK3-215	ENST00000558787	ARHGAP35	Q9NRY4	1499 aa		11.49	□□□□□ -0.57
MARK3-215	ENST00000558787	NEO1	Q92859	1461 aa		11.48	□□□□□ -0.57
MARK3-215	ENST00000558787	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	11.47	□□□□□ -0.57
MARK3-215	ENST00000558787	AKNA	Q7Z591	1439 aa		11.46	□□□□□ -0.57
MARK3-215	ENST00000558787	MKRN3	Q13064	507 aa	Known RBP	11.46	□□□□□ -0.57
MARK3-215	ENST00000558787	PDAP1	Q13442	181 aa	Known RBP	11.46	□□□□□ -0.57
MARK3-215	ENST00000558787	TTC37	Q6PGP7	1564 aa		11.45	□□□□□ -0.58
MARK3-215	ENST00000558787	ARID4B	Q4LE39	1312 aa	Predicted RBP	11.45	□□□□□ -0.58
MARK3-215	ENST00000558787	FRMPD1	Q5SYB0	1578 aa		11.45	□□□□□ -0.58
MARK3-215	ENST00000558787	FANCA	O15360	1455 aa		11.44	□□□□□ -0.58
MARK3-215	ENST00000558787	FMN1	Q68DA7	1419 aa		11.44	□□□□□ -0.58
MARK3-215	ENST00000558787	DENND4B	O75064	1496 aa	Predicted RBP	11.44	□□□□□ -0.58
MARK3-215	ENST00000558787	HECW2	Q9P2P5	1572 aa		11.41	□□□□□ -0.58
MARK3-215	ENST00000558787	FAM163A	Q96GL9	167 aa	Predicted RBP	11.41	□□□□□ -0.58
MARK3-215	ENST00000558787	CDK11A	Q9UQ88	783 aa	Predicted RBP	11.41	□□□□□ -0.58
MARK3-215	ENST00000558787	HECW1	Q76N89	1606 aa		11.4	□□□□□ -0.58
MARK3-215	ENST00000558787	PLCH2	O75038	1416 aa		11.4	□□□□□ -0.58
MARK3-215	ENST00000558787	SCAPER	Q9BY12	1400 aa		11.4	□□□□□ -0.58
MARK3-215	ENST00000558787	EFCAB2	Q5VUJ9	269 aa		11.39	□□□□□ -0.59
MARK3-215	ENST00000558787	RICTOR	Q6R327	1708 aa		11.39	□□□□□ -0.59
MARK3-215	ENST00000558787	YEATS2	Q9ULM3	1422 aa		11.39	□□□□□ -0.59
MARK3-215	ENST00000558787	KIF14	Q15058	1648 aa		11.38	□□□□□ -0.59
MARK3-215	ENST00000558787	PTPRM	P28827	1452 aa		11.38	□□□□□ -0.59
MARK3-215	ENST00000558787	MLEC	Q14165	292 aa		11.38	□□□□□ -0.59
MARK3-215	ENST00000558787	SLAIN1	Q8ND83	568 aa		11.38	□□□□□ -0.59
MARK3-215	ENST00000558787	LRRIQ1	Q96JM4	1722 aa		11.38	□□□□□ -0.59
MARK3-215	ENST00000558787	ADAMTSL3	P82987	1691 aa		11.37	□□□□□ -0.59
MARK3-215	ENST00000558787	TRO	Q12816	1431 aa	Predicted RBP	11.37	□□□□□ -0.59
MARK3-215	ENST00000558787	POTEM	A6NI47	508 aa		11.37	□□□□□ -0.59
MARK3-215	ENST00000558787	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	11.37	□□□□□ -0.59	2e-7	■■■■■ 28.3
MARK3-215	ENST00000558787	CFAP74	Q9C0B2	1584 aa		11.37	□□□□□ -0.59
MARK3-215	ENST00000558787	POTEG	Q6S5H5	508 aa		11.36	□□□□□ -0.59
MARK3-215	ENST00000558787	ILDR1	Q86SU0	546 aa	Predicted RBP	11.36	□□□□□ -0.59
MARK3-215	ENST00000558787	AFAP1	Q8N556	730 aa		11.36	□□□□□ -0.59
MARK3-215	ENST00000558787	ARHGEF40	Q8TER5	1519 aa		11.35	□□□□□ -0.59
MARK3-215	ENST00000558787	MADD	Q8WXG6	1647 aa		11.35	□□□□□ -0.59
MARK3-215	ENST00000558787	BCORL1	Q5H9F3	1711 aa		11.35	□□□□□ -0.59
MARK3-215	ENST00000558787	ZFYVE16	Q7Z3T8	1539 aa		11.35	□□□□□ -0.59
MARK3-215	ENST00000558787	POGZ	Q7Z3K3	1410 aa		11.35	□□□□□ -0.59
MARK3-215	ENST00000558787	CASKIN1	Q8WXD9	1431 aa		11.35	□□□□□ -0.59
MARK3-215	ENST00000558787	PCF11	O94913	1555 aa	Known RBP	11.34	□□□□□ -0.59
MARK3-215	ENST00000558787	PDCD7	Q8N8D1	485 aa	Known RBP	11.34	□□□□□ -0.59
MARK3-215	ENST00000558787	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.34	□□□□□ -0.59
MARK3-215	ENST00000558787	CABP2	Q9NPB3	220 aa		11.34	□□□□□ -0.59
MARK3-215	ENST00000558787	SIGLEC1	Q9BZZ2	1709 aa		11.34	□□□□□ -0.59
MARK3-215	ENST00000558787	CLIP1	P30622	1438 aa		11.34	□□□□□ -0.59
MARK3-215	ENST00000558787	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	11.33	□□□□□ -0.6
MARK3-215	ENST00000558787	MYT1L	Q9UL68	1186 aa		11.33	□□□□□ -0.6
MARK3-215	ENST00000558787	ARHGAP5	Q13017	1502 aa		11.33	□□□□□ -0.6
MARK3-215	ENST00000558787	ZMYM4	Q5VZL5	1548 aa		11.33	□□□□□ -0.6
MARK3-215	ENST00000558787	MYO5C	Q9NQX4	1742 aa		11.32	□□□□□ -0.6
MARK3-215	ENST00000558787	RIMS1	Q86UR5	1692 aa	Known RBP	11.31	□□□□□ -0.6
MARK3-215	ENST00000558787	MAGI2	Q86UL8	1455 aa		11.31	□□□□□ -0.6
MARK3-215	ENST00000558787	ATP10A	O60312	1499 aa		11.3	□□□□□ -0.6
MARK3-215	ENST00000558787	HSPA2	P54652	639 aa		11.29	□□□□□ -0.6
MARK3-215	ENST00000558787	ZNF777	Q9ULD5	760 aa	Predicted RBP	11.29	□□□□□ -0.6
MARK3-215	ENST00000558787	CCDC18	Q5T9S5	1454 aa		11.29	□□□□□ -0.6
MARK3-215	ENST00000558787	CEBPA	P49715	358 aa	Predicted RBP	11.28	□□□□□ -0.6
MARK3-215	ENST00000558787	CDC42BPB	Q9Y5S2	1711 aa		11.28	□□□□□ -0.6
MARK3-215	ENST00000558787	ARHGEF12	Q9NZN5	1544 aa		11.28	□□□□□ -0.6
MARK3-215	ENST00000558787	TRAPPC8	Q9Y2L5	1435 aa		11.27	□□□□□ -0.6
MARK3-215	ENST00000558787	FYCO1	Q9BQS8	1478 aa		11.27	□□□□□ -0.6
MARK3-215	ENST00000558787	RIOK3	O14730	519 aa	Known RBP	11.27	□□□□□ -0.61
MARK3-215	ENST00000558787	C3orf67	Q6ZVT6	689 aa		11.27	□□□□□ -0.61
MARK3-215	ENST00000558787	C9orf84	Q5VXU9	1444 aa		11.26	□□□□□ -0.61
MARK3-215	ENST00000558787	ZNF518A	Q6AHZ1	1483 aa		11.26	□□□□□ -0.61
MARK3-215	ENST00000558787	LMTK3	Q96Q04	1460 aa		11.26	□□□□□ -0.61
MARK3-215	ENST00000558787	LCE2D	Q5TA82	110 aa	Predicted RBP	11.26	□□□□□ -0.61
MARK3-215	ENST00000558787	HNRNPM	P52272	730 aa	Known RBP eCLIP	11.25	□□□□□ -0.61	2e-7	■■■■■ 29.2
MARK3-215	ENST00000558787	PREX2	Q70Z35	1606 aa		11.24	□□□□□ -0.61
MARK3-215	ENST00000558787	LOC105371045	A0A1W2PR82	267 aa		11.24	□□□□□ -0.61
MARK3-215	ENST00000558787		G3V3G9	751 aa		11.24	□□□□□ -0.61
MARK3-215	ENST00000558787	SNPH	O15079	494 aa		11.24	□□□□□ -0.61
MARK3-215	ENST00000558787	PCDH10	Q9P2E7	1040 aa		11.24	□□□□□ -0.61
MARK3-215	ENST00000558787	GPATCH8	Q9UKJ3	1502 aa	Known RBP	11.24	□□□□□ -0.61
MARK3-215	ENST00000558787	KDM5C	P41229	1560 aa		11.24	□□□□□ -0.61
MARK3-215	ENST00000558787	ABCC1	P33527	1531 aa		11.23	□□□□□ -0.61
MARK3-215	ENST00000558787	DIP2C	Q9Y2E4	1556 aa		11.23	□□□□□ -0.61
MARK3-215	ENST00000558787	CDC42BPA	Q5VT25	1732 aa		11.23	□□□□□ -0.61
MARK3-215	ENST00000558787	FER1L4	A9Z1Z3	1794 aa		11.22	□□□□□ -0.61
MARK3-215	ENST00000558787	VGF	O15240	615 aa	Predicted RBP	11.22	□□□□□ -0.61
MARK3-215	ENST00000558787	PLSCR2	Q9NRY7	297 aa		11.22	□□□□□ -0.61
MARK3-215	ENST00000558787	CFDP1	Q9UEE9	299 aa	Predicted RBP	11.22	□□□□□ -0.61
MARK3-215	ENST00000558787	MLH3	Q9UHC1	1453 aa		11.22	□□□□□ -0.61
MARK3-215	ENST00000558787	ABCA6	Q8N139	1617 aa		11.21	□□□□□ -0.61
MARK3-215	ENST00000558787	CEP162	Q5TB80	1403 aa		11.21	□□□□□ -0.61
MARK3-215	ENST00000558787	MTUS2	Q5JR59	1369 aa		11.21	□□□□□ -0.61
MARK3-215	ENST00000558787	ZNF644	Q9H582	1327 aa	Predicted RBP	11.21	□□□□□ -0.61
MARK3-215	ENST00000558787	DPY19L2	Q6NUT2	758 aa		11.21	□□□□□ -0.61
MARK3-215	ENST00000558787	EFCAB3	Q8N7B9	438 aa		11.21	□□□□□ -0.61
MARK3-215	ENST00000558787	RNF25	Q96BH1	459 aa	Predicted RBP	11.21	□□□□□ -0.61
MARK3-215	ENST00000558787	CCNB3	Q8WWL7	1395 aa		11.2	□□□□□ -0.62

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