RNA–Protein interactions for RNA: ENST00000558006.1

AC009996.1-201, humanhuman

TSL 5 BASIC

Gene AC009996.1, Length 653 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009996.1-201ENST00000558006 INO80Q9ULG1 1556 aaPredicted RBP15.31■□□□□ 0.04
AC009996.1-201ENST00000558006 PLXNC1O60486 1568 aa15.3■□□□□ 0.04
AC009996.1-201ENST00000558006 NPATQ14207 1427 aa15.3■□□□□ 0.04
AC009996.1-201ENST00000558006 NCKAP5LQ9HCH0 1330 aa15.3■□□□□ 0.04
AC009996.1-201ENST00000558006 MYO3AQ8NEV4 1616 aa15.29■□□□□ 0.04
AC009996.1-201ENST00000558006 SPATA31D1Q6ZQQ2 1576 aa15.28■□□□□ 0.04
AC009996.1-201ENST00000558006 A2MP01023 1474 aa15.27■□□□□ 0.04
AC009996.1-201ENST00000558006 PLEKHH2Q8IVE3 1493 aa15.27■□□□□ 0.04
AC009996.1-201ENST00000558006 CFDP1Q9UEE9 299 aaPredicted RBP15.27■□□□□ 0.04
AC009996.1-201ENST00000558006 ZNF142P52746 1687 aaPredicted RBP15.27■□□□□ 0.03
AC009996.1-201ENST00000558006 KIAA1107Q9UPP5 1409 aa15.26■□□□□ 0.03
AC009996.1-201ENST00000558006 MTUS2Q5JR59 1369 aa15.26■□□□□ 0.03
AC009996.1-201ENST00000558006 CCNB3Q8WWL7 1395 aa15.26■□□□□ 0.03
AC009996.1-201ENST00000558006 ZNF335Q9H4Z2 1342 aaPredicted RBP15.26■□□□□ 0.03
AC009996.1-201ENST00000558006 ZNF644Q9H582 1327 aaPredicted RBP15.26■□□□□ 0.03
AC009996.1-201ENST00000558006 GGT6Q6P531 493 aa15.26■□□□□ 0.03
AC009996.1-201ENST00000558006 IQSEC2Q5JU85 1478 aa15.26■□□□□ 0.03
AC009996.1-201ENST00000558006 PTPRKQ15262 1439 aa15.26■□□□□ 0.03
AC009996.1-201ENST00000558006 CEP170BQ9Y4F5 1589 aaPredicted RBP15.25■□□□□ 0.03
AC009996.1-201ENST00000558006 SOCS7O14512 581 aa15.25■□□□□ 0.03
AC009996.1-201ENST00000558006 ADGBQ8N7X0 1667 aa15.25■□□□□ 0.03
AC009996.1-201ENST00000558006 POLA2Q14181 598 aa15.24■□□□□ 0.03
AC009996.1-201ENST00000558006 TIAM1Q13009 1591 aa15.23■□□□□ 0.03
AC009996.1-201ENST00000558006 EHBP1L1Q8N3D4 1523 aa15.22■□□□□ 0.03
AC009996.1-201ENST00000558006 PLA2R1Q13018 1463 aa15.21■□□□□ 0.03
AC009996.1-201ENST00000558006 TCOF1Q13428 1488 aaKnown RBP15.21■□□□□ 0.03
AC009996.1-201ENST00000558006 MBD5Q9P267 1494 aa15.2■□□□□ 0.02
AC009996.1-201ENST00000558006 MKRN4PQ13434 485 aaPredicted RBP15.2■□□□□ 0.02
AC009996.1-201ENST00000558006 DNMT1P26358 1616 aaKnown RBP15.18■□□□□ 0.02
AC009996.1-201ENST00000558006 UBAP1LF5GYI3 381 aa15.18■□□□□ 0.02
AC009996.1-201ENST00000558006 PKD2Q13563 968 aa15.18■□□□□ 0.02
AC009996.1-201ENST00000558006 FBXO31Q5XUX0 539 aaPredicted RBP15.16■□□□□ 0.02
AC009996.1-201ENST00000558006 CEP162Q5TB80 1403 aa15.16■□□□□ 0.02
AC009996.1-201ENST00000558006 A2ML1A8K2U0 1454 aa15.15■□□□□ 0.02
AC009996.1-201ENST00000558006 POLR1AO95602 1720 aaPredicted RBP15.15■□□□□ 0.02
AC009996.1-201ENST00000558006 AMER1Q5JTC6 1135 aaPredicted RBP15.15■□□□□ 0.02
AC009996.1-201ENST00000558006 SPDYE4A6NLX3 237 aa15.14■□□□□ 0.01
AC009996.1-201ENST00000558006 DHX29Q7Z478 1369 aaKnown RBP15.13■□□□□ 0.01
AC009996.1-201ENST00000558006 RTEL1-TNFRSF6BF6WH68 1400 aa15.13■□□□□ 0.01
AC009996.1-201ENST00000558006 NEURL4Q96JN8 1562 aa15.13■□□□□ 0.01
AC009996.1-201ENST00000558006 KIF3BO15066 747 aa15.12■□□□□ 0.01
AC009996.1-201ENST00000558006 CAMSAP2Q08AD1 1489 aa15.11■□□□□ 0.01
AC009996.1-201ENST00000558006 NCOA2Q15596 1464 aa15.11■□□□□ 0.01
AC009996.1-201ENST00000558006 CCDC141Q6ZP82 1450 aa15.11■□□□□ 0.01
AC009996.1-201ENST00000558006 TNRQ92752 1358 aa15.11■□□□□ 0.01
AC009996.1-201ENST00000558006 PZPP20742 1482 aa15.09■□□□□ 0.01
AC009996.1-201ENST00000558006 KDM5DQ9BY66 1539 aa15.09■□□□□ 0.01
AC009996.1-201ENST00000558006 ABCB7O75027 752 aa15.09■□□□□ 0.01
AC009996.1-201ENST00000558006 RTN4Q9NQC3 1192 aaKnown RBP15.09■□□□□ 0.01
AC009996.1-201ENST00000558006 PIP4K2BP78356 416 aa15.08■□□□□ 0
AC009996.1-201ENST00000558006 ZBTB12Q9Y330 459 aaPredicted RBP15.08■□□□□ 0
AC009996.1-201ENST00000558006 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.08■□□□□ 0
AC009996.1-201ENST00000558006 HSPA1LP34931 641 aa15.07■□□□□ 0
AC009996.1-201ENST00000558006 WASHC2CQ9Y4E1 1318 aa15.07■□□□□ 0
AC009996.1-201ENST00000558006 SHANK2Q9UPX8 1470 aa15.07■□□□□ 0
AC009996.1-201ENST00000558006 CPS1P31327 1500 aa15.05■□□□□ -0
AC009996.1-201ENST00000558006 FAM135AQ9P2D6 1515 aa15.05■□□□□ -0
AC009996.1-201ENST00000558006 ARHGEF5Q12774 1597 aa15.05■□□□□ -0
AC009996.1-201ENST00000558006 VWDEQ8N2E2 1590 aa15.05■□□□□ -0
AC009996.1-201ENST00000558006 MIA2Q96PC5 1412 aa15.04■□□□□ -0
AC009996.1-201ENST00000558006 RSPH4AQ5TD94 716 aa15.04■□□□□ -0
AC009996.1-201ENST00000558006 UGGT1Q9NYU2 1555 aa15.03■□□□□ -0
AC009996.1-201ENST00000558006 ANKLE2Q86XL3 938 aa15.03■□□□□ -0
AC009996.1-201ENST00000558006 STRCP1A6NGW2 1772 aa15.03■□□□□ -0
AC009996.1-201ENST00000558006 ALKQ9UM73 1620 aa15.03■□□□□ -0
AC009996.1-201ENST00000558006 MED1Q15648 1581 aaPredicted RBP15.02■□□□□ -0
AC009996.1-201ENST00000558006 CFAP65Q6ZU64 1925 aaKnown RBP15.02■□□□□ -0
AC009996.1-201ENST00000558006 VPS8Q8N3P4 1428 aa15.01□□□□□ -0.01
AC009996.1-201ENST00000558006 IQGAP1P46940 1657 aa15.01□□□□□ -0.01
AC009996.1-201ENST00000558006 TOM1O60784 492 aa15.01□□□□□ -0.01
AC009996.1-201ENST00000558006 THEMISQ8N1K5 641 aaPredicted RBP15.01□□□□□ -0.01
AC009996.1-201ENST00000558006 DEPDC5O75140 1603 aa15.01□□□□□ -0.01
AC009996.1-201ENST00000558006 LRRC9Q6ZRR7 1453 aa15.01□□□□□ -0.01
AC009996.1-201ENST00000558006 NLRP1Q9C000 1473 aa15.01□□□□□ -0.01
AC009996.1-201ENST00000558006 NPHP4O75161 1426 aaPredicted RBP15□□□□□ -0.01
AC009996.1-201ENST00000558006 RNF17Q9BXT8 1623 aaKnown RBP15□□□□□ -0.01
AC009996.1-201ENST00000558006 TSPY4P0CV99 314 aa15□□□□□ -0.01
AC009996.1-201ENST00000558006 TSPY10P0CW01 314 aa15□□□□□ -0.01
AC009996.1-201ENST00000558006 MED14O60244 1454 aa15□□□□□ -0.01
AC009996.1-201ENST00000558006 ABCC3O15438 1527 aa14.99□□□□□ -0.01
AC009996.1-201ENST00000558006 CEP152O94986 1710 aa14.98□□□□□ -0.01
AC009996.1-201ENST00000558006 MAST1Q9Y2H9 1570 aa14.98□□□□□ -0.01
AC009996.1-201ENST00000558006 ZC3H13Q5T200 1668 aaKnown RBP14.97□□□□□ -0.01
AC009996.1-201ENST00000558006 MROH1Q8NDA8 1641 aa14.97□□□□□ -0.01
AC009996.1-201ENST00000558006 EIF2AK4Q9P2K8 1649 aaKnown RBP14.96□□□□□ -0.01
AC009996.1-201ENST00000558006 FBXO3Q9UK99 471 aa14.96□□□□□ -0.01
AC009996.1-201ENST00000558006 ERVK-7P63135 1459 aa14.95□□□□□ -0.02
AC009996.1-201ENST00000558006 UBR1Q8IWV7 1749 aa14.95□□□□□ -0.02
AC009996.1-201ENST00000558006 LRRC7Q96NW7 1537 aa14.94□□□□□ -0.02
AC009996.1-201ENST00000558006 DSG3P32926 999 aa14.94□□□□□ -0.02
AC009996.1-201ENST00000558006 KANK4Q5T7N3 995 aaPredicted RBP14.94□□□□□ -0.02
AC009996.1-201ENST00000558006 MAP3K1Q13233 1512 aa14.93□□□□□ -0.02
AC009996.1-201ENST00000558006 LOC105371045A0A1W2PR82 267 aa14.93□□□□□ -0.02
AC009996.1-201ENST00000558006 PROM2Q8N271 834 aa14.93□□□□□ -0.02
AC009996.1-201ENST00000558006 MYOM3Q5VTT5 1437 aa14.92□□□□□ -0.02
AC009996.1-201ENST00000558006 XIRP1Q702N8 1843 aaKnown RBP14.91□□□□□ -0.02
AC009996.1-201ENST00000558006 SYNMO15061 1565 aa14.9□□□□□ -0.02
AC009996.1-201ENST00000558006 CROCC2H7BZ55 1655 aa14.9□□□□□ -0.02
AC009996.1-201ENST00000558006 DUOX2Q9NRD8 1548 aa14.89□□□□□ -0.03
AC009996.1-201ENST00000558006 LTKP29376 864 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms