RNA–Protein interactions for RNA: ENST00000558006.1

AC009996.1-201, humanhuman

TSL 5 BASIC

Gene AC009996.1, Length 653 nt, Biotype sense intronic.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009996.1-201ENST00000558006 AEBP2Q6ZN18 517 aaPredicted RBP25.28■■□□□ 1.64
AC009996.1-201ENST00000558006 CHIC1Q5VXU3 224 aa25.21■■□□□ 1.63
AC009996.1-201ENST00000558006 NISCHQ9Y2I1 1504 aa23.85■■□□□ 1.41
AC009996.1-201ENST00000558006 PHF23Q9BUL5 403 aaPredicted RBP22.19■■□□□ 1.14
AC009996.1-201ENST00000558006 ABCC9O60706 1549 aa21.72■■□□□ 1.07
AC009996.1-201ENST00000558006 CCDC180Q9P1Z9 1646 aa21.48■■□□□ 1.03
AC009996.1-201ENST00000558006 SENP3Q9H4L4 574 aaPredicted RBP21.42■■□□□ 1.02
AC009996.1-201ENST00000558006 PLPPR3Q6T4P5 718 aa20.72■□□□□ 0.91
AC009996.1-201ENST00000558006 DNAJC5BQ9UF47 199 aa20.59■□□□□ 0.89
AC009996.1-201ENST00000558006 RB1CC1Q8TDY2 1594 aa20.53■□□□□ 0.88
AC009996.1-201ENST00000558006 NACADO15069 1562 aa20.33■□□□□ 0.84
AC009996.1-201ENST00000558006 DCAF8L2P0C7V8 631 aa20.26■□□□□ 0.83
AC009996.1-201ENST00000558006 PABPN1Q86U42 306 aaKnown RBP eCLIP20.2■□□□□ 0.82
AC009996.1-201ENST00000558006 UNC13AQ9UPW8 1703 aa20.19■□□□□ 0.82
AC009996.1-201ENST00000558006 BICRAQ9NZM4 1560 aa20■□□□□ 0.79
AC009996.1-201ENST00000558006 MYO15BQ96JP2 1530 aa19.95■□□□□ 0.78
AC009996.1-201ENST00000558006 FOXD1Q16676 465 aa19.79■□□□□ 0.76
AC009996.1-201ENST00000558006 ZCCHC6Q5VYS8 1495 aaKnown RBP19.72■□□□□ 0.75
AC009996.1-201ENST00000558006 DCAF1Q9Y4B6 1507 aa19.64■□□□□ 0.73
AC009996.1-201ENST00000558006 SCRIBQ14160 1630 aa19.62■□□□□ 0.73
AC009996.1-201ENST00000558006 CC2D2AQ9P2K1 1620 aa19.61■□□□□ 0.73
AC009996.1-201ENST00000558006 SHROOM4Q9ULL8 1493 aa19.58■□□□□ 0.72
AC009996.1-201ENST00000558006 CECR2Q9BXF3 1484 aa19.55■□□□□ 0.72
AC009996.1-201ENST00000558006 EIF4G1Q04637 1599 aaKnown RBP19.5■□□□□ 0.71
AC009996.1-201ENST00000558006 ADRA2BP18089 450 aa19.45■□□□□ 0.7
AC009996.1-201ENST00000558006 PPP6R1Q9UPN7 881 aa19.41■□□□□ 0.7
AC009996.1-201ENST00000558006 DNAJC5Q9H3Z4 198 aa18.97■□□□□ 0.63
AC009996.1-201ENST00000558006 PIAS4Q8N2W9 510 aaPredicted RBP18.82■□□□□ 0.6
AC009996.1-201ENST00000558006 NCAPD3P42695 1498 aa18.77■□□□□ 0.6
AC009996.1-201ENST00000558006 CUX2O14529 1486 aa18.71■□□□□ 0.59
AC009996.1-201ENST00000558006 ERCC6Q03468 1493 aa18.71■□□□□ 0.59
AC009996.1-201ENST00000558006 ATAD2BQ9ULI0 1458 aa18.71■□□□□ 0.59
AC009996.1-201ENST00000558006 SMARCA4P51532 1647 aa18.67■□□□□ 0.58
AC009996.1-201ENST00000558006 NESP48681 1621 aa18.63■□□□□ 0.57
AC009996.1-201ENST00000558006 SMARCA2P51531 1590 aa18.62■□□□□ 0.57
AC009996.1-201ENST00000558006 HMGXB3Q12766 1538 aa18.61■□□□□ 0.57
AC009996.1-201ENST00000558006 BAZ1BQ9UIG0 1483 aaKnown RBP18.52■□□□□ 0.55
AC009996.1-201ENST00000558006 BAZ1AQ9NRL2 1556 aaPredicted RBP18.51■□□□□ 0.55
AC009996.1-201ENST00000558006 KCNA4P22459 653 aa18.45■□□□□ 0.54
AC009996.1-201ENST00000558006 THOC2Q8NI27 1593 aaKnown RBP18.45■□□□□ 0.54
AC009996.1-201ENST00000558006 PEG3Q9GZU2 1588 aa18.45■□□□□ 0.54
AC009996.1-201ENST00000558006 MROH2BQ7Z745 1585 aa18.42■□□□□ 0.54
AC009996.1-201ENST00000558006 LAMC3Q9Y6N6 1575 aa18.39■□□□□ 0.53
AC009996.1-201ENST00000558006 KIF21AQ7Z4S6 1674 aa18.39■□□□□ 0.53
AC009996.1-201ENST00000558006 PPP4R3CPQ6ZMV5 832 aa18.3■□□□□ 0.52
AC009996.1-201ENST00000558006 PDS5BQ9NTI5 1447 aa18.26■□□□□ 0.51
AC009996.1-201ENST00000558006 WIZO95785 1651 aa18.22■□□□□ 0.51
AC009996.1-201ENST00000558006 CADPSQ9ULU8 1353 aa18.2■□□□□ 0.5
AC009996.1-201ENST00000558006 MRC2Q9UBG0 1479 aa18.14■□□□□ 0.5
AC009996.1-201ENST00000558006 WDR62O43379 1518 aa18.12■□□□□ 0.49
AC009996.1-201ENST00000558006 MSH5O43196 834 aa18.09■□□□□ 0.49
AC009996.1-201ENST00000558006 TRIM41Q8WV44 630 aa18.09■□□□□ 0.49
AC009996.1-201ENST00000558006 CEP164Q9UPV0 1460 aa18.03■□□□□ 0.48
AC009996.1-201ENST00000558006 FANCD2Q9BXW9 1451 aa18.01■□□□□ 0.47
AC009996.1-201ENST00000558006 NCBP3Q53F19 620 aaKnown RBP18.01■□□□□ 0.47
AC009996.1-201ENST00000558006 CFTRP13569 1480 aa17.95■□□□□ 0.46
AC009996.1-201ENST00000558006 RSF1Q96T23 1441 aaPredicted RBP17.94■□□□□ 0.46
AC009996.1-201ENST00000558006 TOP2AP11388 1531 aaKnown RBP17.9■□□□□ 0.46
AC009996.1-201ENST00000558006 URB2Q14146 1524 aaKnown RBP17.9■□□□□ 0.46
AC009996.1-201ENST00000558006 OSCARQ8IYS5 282 aa17.85■□□□□ 0.45
AC009996.1-201ENST00000558006 SCAF1Q9H7N4 1312 aaKnown RBP17.84■□□□□ 0.45
AC009996.1-201ENST00000558006 PRDM2Q13029 1718 aa17.81■□□□□ 0.44
AC009996.1-201ENST00000558006 EHMT2Q96KQ7 1210 aa17.77■□□□□ 0.44
AC009996.1-201ENST00000558006 ZNF608Q9ULD9 1512 aaPredicted RBP17.73■□□□□ 0.43
AC009996.1-201ENST00000558006 CCDC88BA6NC98 1476 aa17.73■□□□□ 0.43
AC009996.1-201ENST00000558006 NPM3O75607 178 aaKnown RBP17.71■□□□□ 0.43
AC009996.1-201ENST00000558006 RIMBP3CA6NJZ7 1639 aa17.7■□□□□ 0.42
AC009996.1-201ENST00000558006 RIMBP3BA6NNM3 1639 aa17.7■□□□□ 0.42
AC009996.1-201ENST00000558006 RIMBP3Q9UFD9 1639 aa17.7■□□□□ 0.42
AC009996.1-201ENST00000558006 CNKSR2Q8WXI2 1034 aa17.69■□□□□ 0.42
AC009996.1-201ENST00000558006 SLC4A1APQ9BWU0 796 aaKnown RBP17.69■□□□□ 0.42
AC009996.1-201ENST00000558006 IFT140Q96RY7 1462 aa17.67■□□□□ 0.42
AC009996.1-201ENST00000558006 TOPBP1Q92547 1522 aa17.66■□□□□ 0.42
AC009996.1-201ENST00000558006 EIF4G3O43432 1585 aaKnown RBP17.61■□□□□ 0.41
AC009996.1-201ENST00000558006 ARHGEF11O15085 1522 aa17.6■□□□□ 0.41
AC009996.1-201ENST00000558006 DNMBPQ6XZF7 1577 aa17.57■□□□□ 0.4
AC009996.1-201ENST00000558006 CHD1O14646 1710 aa17.55■□□□□ 0.4
AC009996.1-201ENST00000558006 ABCC8Q09428 1581 aa17.54■□□□□ 0.4
AC009996.1-201ENST00000558006 AQRO60306 1485 aaKnown RBP eCLIP17.54■□□□□ 0.4
AC009996.1-201ENST00000558006 TARBP1Q13395 1621 aaKnown RBP17.54■□□□□ 0.4
AC009996.1-201ENST00000558006 CYB5RLQ6IPT4 315 aa17.49■□□□□ 0.39
AC009996.1-201ENST00000558006 MAPK8IP2Q13387 824 aaPredicted RBP17.48■□□□□ 0.39
AC009996.1-201ENST00000558006 POLA1P09884 1462 aaPredicted RBP17.46■□□□□ 0.39
AC009996.1-201ENST00000558006 FBLN2P98095 1184 aa17.45■□□□□ 0.38
AC009996.1-201ENST00000558006 RAD54L2Q9Y4B4 1467 aa17.44■□□□□ 0.38
AC009996.1-201ENST00000558006 ARAP1Q96P48 1450 aa17.42■□□□□ 0.38
AC009996.1-201ENST00000558006 TDRD9Q8NDG6 1382 aaKnown RBP17.4■□□□□ 0.38
AC009996.1-201ENST00000558006 SOGA1O94964 1423 aa17.37■□□□□ 0.37
AC009996.1-201ENST00000558006 TRHP20396 242 aaPredicted RBP17.34■□□□□ 0.37
AC009996.1-201ENST00000558006 FGD5Q6ZNL6 1462 aa17.34■□□□□ 0.37
AC009996.1-201ENST00000558006 SNAPC4Q5SXM2 1469 aa17.33■□□□□ 0.37
AC009996.1-201ENST00000558006 CUX1P39880 1505 aa17.31■□□□□ 0.36
AC009996.1-201ENST00000558006 CLASP1Q7Z460 1538 aa17.3■□□□□ 0.36
AC009996.1-201ENST00000558006 CSRNP3Q8WYN3 585 aa17.29■□□□□ 0.36
AC009996.1-201ENST00000558006 WDR97A6NE52 1622 aa17.26■□□□□ 0.35
AC009996.1-201ENST00000558006 CHMP7Q8WUX9 453 aaPredicted RBP17.25■□□□□ 0.35
AC009996.1-201ENST00000558006 MAGI1Q96QZ7 1491 aaPredicted RBP17.24■□□□□ 0.35
AC009996.1-201ENST00000558006 SYNJ1O43426 1573 aa17.23■□□□□ 0.35
AC009996.1-201ENST00000558006 GRIN2BQ13224 1484 aa17.22■□□□□ 0.35
AC009996.1-201ENST00000558006 PBRM1Q86U86 1689 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms