RNA–Protein interactions for RNA: ENST00000557344.5

APEX1-218, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-218ENST00000557344 TNRQ92752 1358 aa16.4■□□□□ 0.22
APEX1-218ENST00000557344 PHF23Q9BUL5 403 aaPredicted RBP16.4■□□□□ 0.22
APEX1-218ENST00000557344 ANKLE2Q86XL3 938 aa16.39■□□□□ 0.21
APEX1-218ENST00000557344 POLR1AO95602 1720 aaPredicted RBP16.39■□□□□ 0.21
APEX1-218ENST00000557344 DHX29Q7Z478 1369 aaKnown RBP16.38■□□□□ 0.21
APEX1-218ENST00000557344 ZNF644Q9H582 1327 aaPredicted RBP16.38■□□□□ 0.21
APEX1-218ENST00000557344 VWDEQ8N2E2 1590 aa16.38■□□□□ 0.21
APEX1-218ENST00000557344 ALKQ9UM73 1620 aa16.37■□□□□ 0.21
APEX1-218ENST00000557344 RTEL1-TNFRSF6BF6WH68 1400 aa16.37■□□□□ 0.21
APEX1-218ENST00000557344 MBD5Q9P267 1494 aa16.37■□□□□ 0.21
APEX1-218ENST00000557344 THEMISQ8N1K5 641 aaPredicted RBP16.37■□□□□ 0.21
APEX1-218ENST00000557344 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.37■□□□□ 0.21
APEX1-218ENST00000557344 PZPP20742 1482 aa16.36■□□□□ 0.21
APEX1-218ENST00000557344 KIF3BO15066 747 aa16.35■□□□□ 0.21
APEX1-218ENST00000557344 MED14O60244 1454 aa16.35■□□□□ 0.21
APEX1-218ENST00000557344 MTUS2Q5JR59 1369 aa16.34■□□□□ 0.21
APEX1-218ENST00000557344 NPHP4O75161 1426 aaPredicted RBP16.34■□□□□ 0.21
APEX1-218ENST00000557344 MIA2Q96PC5 1412 aa16.34■□□□□ 0.21
APEX1-218ENST00000557344 KDM5DQ9BY66 1539 aa16.32■□□□□ 0.2
APEX1-218ENST00000557344 NLRP1Q9C000 1473 aa16.32■□□□□ 0.2
APEX1-218ENST00000557344 FAM135AQ9P2D6 1515 aa16.32■□□□□ 0.2
APEX1-218ENST00000557344 WASHC2CQ9Y4E1 1318 aa16.32■□□□□ 0.2
APEX1-218ENST00000557344 DEPDC5O75140 1603 aa16.31■□□□□ 0.2
APEX1-218ENST00000557344 UGGT1Q9NYU2 1555 aa16.3■□□□□ 0.2
APEX1-218ENST00000557344 TIAM1Q13009 1591 aa16.3■□□□□ 0.2
APEX1-218ENST00000557344 LRRC7Q96NW7 1537 aa16.29■□□□□ 0.2
APEX1-218ENST00000557344 SENP3Q9H4L4 574 aaPredicted RBP16.28■□□□□ 0.2
APEX1-218ENST00000557344 RGS17Q9UGC6 210 aaPredicted RBP16.27■□□□□ 0.2
APEX1-218ENST00000557344 IQGAP1P46940 1657 aa16.25■□□□□ 0.19
APEX1-218ENST00000557344 CCDC141Q6ZP82 1450 aa16.25■□□□□ 0.19
APEX1-218ENST00000557344 RSPH4AQ5TD94 716 aa16.25■□□□□ 0.19
APEX1-218ENST00000557344 CEP162Q5TB80 1403 aa16.25■□□□□ 0.19
APEX1-218ENST00000557344 STRCP1A6NGW2 1772 aa16.25■□□□□ 0.19
APEX1-218ENST00000557344 EHBP1L1Q8N3D4 1523 aa16.23■□□□□ 0.19
APEX1-218ENST00000557344 RNF17Q9BXT8 1623 aaKnown RBP16.23■□□□□ 0.19
APEX1-218ENST00000557344 SYNMO15061 1565 aa16.21■□□□□ 0.19
APEX1-218ENST00000557344 CAMSAP2Q08AD1 1489 aa16.19■□□□□ 0.18
APEX1-218ENST00000557344 ERVK-7P63135 1459 aa16.17■□□□□ 0.18
APEX1-218ENST00000557344 TSPY4P0CV99 314 aa16.17■□□□□ 0.18
APEX1-218ENST00000557344 TSPY10P0CW01 314 aa16.17■□□□□ 0.18
APEX1-218ENST00000557344 ABCC3O15438 1527 aa16.17■□□□□ 0.18
APEX1-218ENST00000557344 ZC3H13Q5T200 1668 aaKnown RBP16.17■□□□□ 0.18
APEX1-218ENST00000557344 SCAF11Q99590 1463 aaKnown RBP16.16■□□□□ 0.18
APEX1-218ENST00000557344 LTKP29376 864 aa16.15■□□□□ 0.18
APEX1-218ENST00000557344 POTEAQ6S8J7 498 aa16.15■□□□□ 0.18
APEX1-218ENST00000557344 NCOA2Q15596 1464 aa16.15■□□□□ 0.18
APEX1-218ENST00000557344 ARHGEF5Q12774 1597 aa16.14■□□□□ 0.17
APEX1-218ENST00000557344 FAM135BQ49AJ0 1406 aa16.14■□□□□ 0.17
APEX1-218ENST00000557344 LOC105371045A0A1W2PR82 267 aa16.13■□□□□ 0.17
APEX1-218ENST00000557344 TXNDC2Q86VQ3 553 aa16.13■□□□□ 0.17
APEX1-218ENST00000557344 ARHGAP23Q9P227 1491 aa16.12■□□□□ 0.17
APEX1-218ENST00000557344 UBR1Q8IWV7 1749 aa16.12■□□□□ 0.17
APEX1-218ENST00000557344 XIRP1Q702N8 1843 aaKnown RBP16.1■□□□□ 0.17
APEX1-218ENST00000557344 SLIT1O75093 1534 aa16.1■□□□□ 0.17
APEX1-218ENST00000557344 MROH1Q8NDA8 1641 aa16.08■□□□□ 0.17
APEX1-218ENST00000557344 EID1Q9Y6B2 187 aa16.08■□□□□ 0.16
APEX1-218ENST00000557344 MAST1Q9Y2H9 1570 aa16.08■□□□□ 0.16
APEX1-218ENST00000557344 EIF2AK4Q9P2K8 1649 aaKnown RBP16.08■□□□□ 0.16
APEX1-218ENST00000557344 CFAP65Q6ZU64 1925 aaKnown RBP16.06■□□□□ 0.16
APEX1-218ENST00000557344 TMEM94Q12767 1356 aa16.06■□□□□ 0.16
APEX1-218ENST00000557344 ARHGAP31Q2M1Z3 1444 aa16.05■□□□□ 0.16
APEX1-218ENST00000557344 CEP152O94986 1710 aa16.05■□□□□ 0.16
APEX1-218ENST00000557344 TMEM2Q9UHN6 1383 aa16.04■□□□□ 0.16
APEX1-218ENST00000557344 KCNA6P17658 529 aa16.03■□□□□ 0.16
APEX1-218ENST00000557344 PROSER2Q86WR7 435 aaPredicted RBP16.02■□□□□ 0.16
APEX1-218ENST00000557344 VPS8Q8N3P4 1428 aa16.02■□□□□ 0.15
APEX1-218ENST00000557344 DUOX2Q9NRD8 1548 aa16.01■□□□□ 0.15
APEX1-218ENST00000557344 ROBO1Q9Y6N7 1651 aa16.01■□□□□ 0.15
APEX1-218ENST00000557344 MAP3K1Q13233 1512 aa16■□□□□ 0.15
APEX1-218ENST00000557344 RBM33Q96EV2 1170 aaKnown RBP16■□□□□ 0.15
APEX1-218ENST00000557344 PIK3C2BO00750 1634 aa15.99■□□□□ 0.15
APEX1-218ENST00000557344 STAG3Q9UJ98 1225 aa15.99■□□□□ 0.15
APEX1-218ENST00000557344 LRRC9Q6ZRR7 1453 aa15.98■□□□□ 0.15
APEX1-218ENST00000557344 SLC26A8Q96RN1 970 aa15.98■□□□□ 0.15
APEX1-218ENST00000557344 TET3O43151 1660 aa15.98■□□□□ 0.15
APEX1-218ENST00000557344 PRDM15P57071 1507 aaPredicted RBP15.98■□□□□ 0.15
APEX1-218ENST00000557344 IDI1Q13907 227 aa15.97■□□□□ 0.15
APEX1-218ENST00000557344 MYOM3Q5VTT5 1437 aa15.96■□□□□ 0.15
APEX1-218ENST00000557344 EFCAB6Q5THR3 1501 aa15.96■□□□□ 0.15
APEX1-218ENST00000557344 SLAIN2Q9P270 581 aa15.96■□□□□ 0.15
APEX1-218ENST00000557344 JCADQ9P266 1359 aa15.96■□□□□ 0.15
APEX1-218ENST00000557344 SETD1AO15047 1707 aaKnown RBP15.96■□□□□ 0.15
APEX1-218ENST00000557344 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.95■□□□□ 0.141e-8■□□□□ 10
APEX1-218ENST00000557344 KIF15Q9NS87 1388 aa15.95■□□□□ 0.14
APEX1-218ENST00000557344 NKTRP30414 1462 aaKnown RBP15.95■□□□□ 0.14
APEX1-218ENST00000557344 ERBINQ96RT1 1412 aa15.94■□□□□ 0.14
APEX1-218ENST00000557344 RRP7BPQ9NSQ0 103 aa15.94■□□□□ 0.14
APEX1-218ENST00000557344 MSH6P52701 1360 aa15.94■□□□□ 0.14
APEX1-218ENST00000557344 KDM5AP29375 1690 aaKnown RBP15.94■□□□□ 0.14
APEX1-218ENST00000557344 NWD1Q149M9 1564 aa15.92■□□□□ 0.14
APEX1-218ENST00000557344 KANK4Q5T7N3 995 aaPredicted RBP15.92■□□□□ 0.14
APEX1-218ENST00000557344 UPF1Q92900 1129 aaKnown RBP eCLIP15.92■□□□□ 0.14
APEX1-218ENST00000557344 PHLPP1O60346 1717 aa15.91■□□□□ 0.14
APEX1-218ENST00000557344 KANK1Q14678 1352 aa15.91■□□□□ 0.14
APEX1-218ENST00000557344 ABCC5O15440 1437 aa15.9■□□□□ 0.14
APEX1-218ENST00000557344 LMTK2Q8IWU2 1503 aa15.89■□□□□ 0.13
APEX1-218ENST00000557344 SPATA31A6Q5VVP1 1343 aa15.89■□□□□ 0.13
APEX1-218ENST00000557344 NOS1P29475 1434 aa15.88■□□□□ 0.13
APEX1-218ENST00000557344 ZNF772Q68DY9 489 aaPredicted RBP15.88■□□□□ 0.13
APEX1-218ENST00000557344 BCANQ96GW7 911 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms