RNA–Protein interactions for RNA: ENST00000557168.1

TRAV30-201, Transcript of T cell receptor alpha variable 30, humanhuman

APPRIS P1 BASIC

Gene TRAV30, Length 337 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30-201ENST00000557168 A2ML1A8K2U0 1454 aa7.81□□□□□ -1.16
TRAV30-201ENST00000557168 POLR1AO95602 1720 aaPredicted RBP7.81□□□□□ -1.16
TRAV30-201ENST00000557168 ATP7AQ04656 1500 aa7.8□□□□□ -1.16
TRAV30-201ENST00000557168 KIF3BO15066 747 aa7.79□□□□□ -1.16
TRAV30-201ENST00000557168 CFDP1Q9UEE9 299 aaPredicted RBP7.79□□□□□ -1.16
TRAV30-201ENST00000557168 TNRQ92752 1358 aa7.79□□□□□ -1.16
TRAV30-201ENST00000557168 VWDEQ8N2E2 1590 aa7.79□□□□□ -1.16
TRAV30-201ENST00000557168 CPS1P31327 1500 aa7.78□□□□□ -1.16
TRAV30-201ENST00000557168 GPATCH8Q9UKJ3 1502 aaKnown RBP7.78□□□□□ -1.16
TRAV30-201ENST00000557168 RBM33Q96EV2 1170 aaKnown RBP7.77□□□□□ -1.17
TRAV30-201ENST00000557168 NPHP4O75161 1426 aaPredicted RBP7.77□□□□□ -1.17
TRAV30-201ENST00000557168 PLXNC1O60486 1568 aa7.76□□□□□ -1.17
TRAV30-201ENST00000557168 SETD1AO15047 1707 aaKnown RBP7.76□□□□□ -1.17
TRAV30-201ENST00000557168 THEMISQ8N1K5 641 aaPredicted RBP7.76□□□□□ -1.17
TRAV30-201ENST00000557168 LRRC7Q96NW7 1537 aa7.76□□□□□ -1.17
TRAV30-201ENST00000557168 WASHC2CQ9Y4E1 1318 aa7.76□□□□□ -1.17
TRAV30-201ENST00000557168 INO80Q9ULG1 1556 aaPredicted RBP7.76□□□□□ -1.17
TRAV30-201ENST00000557168 CCNB3Q8WWL7 1395 aa7.75□□□□□ -1.17
TRAV30-201ENST00000557168 CASKIN1Q8WXD9 1431 aa7.75□□□□□ -1.17
TRAV30-201ENST00000557168 ADGBQ8N7X0 1667 aa7.73□□□□□ -1.17
TRAV30-201ENST00000557168 DHX29Q7Z478 1369 aaKnown RBP7.73□□□□□ -1.17
TRAV30-201ENST00000557168 UGGT1Q9NYU2 1555 aa7.73□□□□□ -1.17
TRAV30-201ENST00000557168 MIA2Q96PC5 1412 aa7.73□□□□□ -1.17
TRAV30-201ENST00000557168 CCDC18Q5T9S5 1454 aa7.73□□□□□ -1.17
TRAV30-201ENST00000557168 XIRP1Q702N8 1843 aaKnown RBP7.73□□□□□ -1.17
TRAV30-201ENST00000557168 IQGAP1P46940 1657 aa7.73□□□□□ -1.17
TRAV30-201ENST00000557168 LTKP29376 864 aa7.72□□□□□ -1.17
TRAV30-201ENST00000557168 FAM135AQ9P2D6 1515 aa7.72□□□□□ -1.17
TRAV30-201ENST00000557168 KIAA1107Q9UPP5 1409 aa7.71□□□□□ -1.17
TRAV30-201ENST00000557168 PZPP20742 1482 aa7.71□□□□□ -1.18
TRAV30-201ENST00000557168 ZEB1P37275 1124 aaPredicted RBP7.71□□□□□ -1.18
TRAV30-201ENST00000557168 MED14O60244 1454 aa7.7□□□□□ -1.18
TRAV30-201ENST00000557168 MBD5Q9P267 1494 aa7.7□□□□□ -1.18
TRAV30-201ENST00000557168 TXNDC2Q86VQ3 553 aa7.7□□□□□ -1.18
TRAV30-201ENST00000557168 TRIM52Q96A61 297 aa7.7□□□□□ -1.18
TRAV30-201ENST00000557168 RNF17Q9BXT8 1623 aaKnown RBP7.7□□□□□ -1.18
TRAV30-201ENST00000557168 MTUS2Q5JR59 1369 aa7.7□□□□□ -1.18
TRAV30-201ENST00000557168 PLEKHH2Q8IVE3 1493 aa7.69□□□□□ -1.18
TRAV30-201ENST00000557168 DEPDC5O75140 1603 aa7.69□□□□□ -1.18
TRAV30-201ENST00000557168 KDM5DQ9BY66 1539 aa7.68□□□□□ -1.18
TRAV30-201ENST00000557168 TIAM1Q13009 1591 aa7.68□□□□□ -1.18
TRAV30-201ENST00000557168 ZC3H13Q5T200 1668 aaKnown RBP7.68□□□□□ -1.18
TRAV30-201ENST00000557168 PROSER2Q86WR7 435 aaPredicted RBP7.68□□□□□ -1.18
TRAV30-201ENST00000557168 UPF1Q92900 1129 aaKnown RBP eCLIP7.68□□□□□ -1.18
TRAV30-201ENST00000557168 SLC26A8Q96RN1 970 aa7.67□□□□□ -1.18
TRAV30-201ENST00000557168 FYCO1Q9BQS8 1478 aa7.67□□□□□ -1.18
TRAV30-201ENST00000557168 NLRP1Q9C000 1473 aa7.67□□□□□ -1.18
TRAV30-201ENST00000557168 TMEM94Q12767 1356 aa7.66□□□□□ -1.18
TRAV30-201ENST00000557168 RTEL1-TNFRSF6BF6WH68 1400 aa7.66□□□□□ -1.18
TRAV30-201ENST00000557168 ROBO1Q9Y6N7 1651 aa7.66□□□□□ -1.18
TRAV30-201ENST00000557168 CEP152O94986 1710 aa7.66□□□□□ -1.18
TRAV30-201ENST00000557168 SYNMO15061 1565 aa7.65□□□□□ -1.18
TRAV30-201ENST00000557168 NCOA2Q15596 1464 aa7.65□□□□□ -1.18
TRAV30-201ENST00000557168 FAM135BQ49AJ0 1406 aa7.65□□□□□ -1.18
TRAV30-201ENST00000557168 UBR1Q8IWV7 1749 aa7.65□□□□□ -1.18
TRAV30-201ENST00000557168 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.65□□□□□ -1.18
TRAV30-201ENST00000557168 ERVK-7P63135 1459 aa7.64□□□□□ -1.19
TRAV30-201ENST00000557168 SCAF11Q99590 1463 aaKnown RBP7.64□□□□□ -1.19
TRAV30-201ENST00000557168 TSPY4P0CV99 314 aa7.64□□□□□ -1.19
TRAV30-201ENST00000557168 TSPY10P0CW01 314 aa7.64□□□□□ -1.19
TRAV30-201ENST00000557168 MEX3CQ5U5Q3 659 aaKnown RBP7.64□□□□□ -1.19
TRAV30-201ENST00000557168 BCANQ96GW7 911 aa7.64□□□□□ -1.19
TRAV30-201ENST00000557168 PHLPP1O60346 1717 aa7.64□□□□□ -1.19
TRAV30-201ENST00000557168 ABCC3O15438 1527 aa7.63□□□□□ -1.19
TRAV30-201ENST00000557168 CAMSAP2Q08AD1 1489 aa7.63□□□□□ -1.19
TRAV30-201ENST00000557168 CCDC141Q6ZP82 1450 aa7.63□□□□□ -1.19
TRAV30-201ENST00000557168 NUTM2BA6NNL0 878 aaPredicted RBP7.63□□□□□ -1.19
TRAV30-201ENST00000557168 NUTM2EB1AL46 878 aaPredicted RBP7.63□□□□□ -1.19
TRAV30-201ENST00000557168 PPARGC1BQ86YN6 1023 aaKnown RBP7.63□□□□□ -1.19
TRAV30-201ENST00000557168 NUTM2AQ8IVF1 878 aaPredicted RBP7.63□□□□□ -1.19
TRAV30-201ENST00000557168 STAG3Q9UJ98 1225 aa7.63□□□□□ -1.19
TRAV30-201ENST00000557168 EID1Q9Y6B2 187 aa7.63□□□□□ -1.19
TRAV30-201ENST00000557168 KCNA6P17658 529 aa7.62□□□□□ -1.19
TRAV30-201ENST00000557168 SLAIN2Q9P270 581 aa7.62□□□□□ -1.19
TRAV30-201ENST00000557168 LRP6O75581 1613 aa7.61□□□□□ -1.19
TRAV30-201ENST00000557168 IDI1Q13907 227 aa7.6□□□□□ -1.19
TRAV30-201ENST00000557168 MAP3K1Q13233 1512 aa7.6□□□□□ -1.19
TRAV30-201ENST00000557168 ARHGAP23Q9P227 1491 aa7.6□□□□□ -1.19
TRAV30-201ENST00000557168 PIK3C2BO00750 1634 aa7.6□□□□□ -1.19
TRAV30-201ENST00000557168 MROH1Q8NDA8 1641 aa7.6□□□□□ -1.19
TRAV30-201ENST00000557168 JCADQ9P266 1359 aa7.59□□□□□ -1.19
TRAV30-201ENST00000557168 RXRBP28702 533 aa7.59□□□□□ -1.19
TRAV30-201ENST00000557168 RSPH4AQ5TD94 716 aa7.59□□□□□ -1.19
TRAV30-201ENST00000557168 NUTM2DQ5VT03 806 aaPredicted RBP7.59□□□□□ -1.19
TRAV30-201ENST00000557168 RRP7BPQ9NSQ0 103 aa7.59□□□□□ -1.19
TRAV30-201ENST00000557168 CEP162Q5TB80 1403 aa7.59□□□□□ -1.19
TRAV30-201ENST00000557168 SLIT1O75093 1534 aa7.58□□□□□ -1.2
TRAV30-201ENST00000557168 EHBP1L1Q8N3D4 1523 aa7.58□□□□□ -1.2
TRAV30-201ENST00000557168 C14orf37Q86TY3 774 aa7.58□□□□□ -1.2
TRAV30-201ENST00000557168 MSH6P52701 1360 aa7.58□□□□□ -1.2
TRAV30-201ENST00000557168 TMEM2Q9UHN6 1383 aa7.58□□□□□ -1.2
TRAV30-201ENST00000557168 ZNF772Q68DY9 489 aaPredicted RBP7.57□□□□□ -1.2
TRAV30-201ENST00000557168 DDX17Q92841 729 aaKnown RBP7.56□□□□□ -1.2
TRAV30-201ENST00000557168 CHIC2Q9UKJ5 165 aa7.56□□□□□ -1.2
TRAV30-201ENST00000557168 TET3O43151 1660 aa7.56□□□□□ -1.2
TRAV30-201ENST00000557168 COL16A1Q07092 1604 aaPredicted RBP7.56□□□□□ -1.2
TRAV30-201ENST00000557168 AFF2P51816 1311 aa7.55□□□□□ -1.2
TRAV30-201ENST00000557168 ARHGEF5Q12774 1597 aa7.55□□□□□ -1.2
TRAV30-201ENST00000557168 MYO5BQ9ULV0 1848 aa7.55□□□□□ -1.2
TRAV30-201ENST00000557168 KANK4Q5T7N3 995 aaPredicted RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms