RNA–Protein interactions for RNA: ENST00000557168.1

TRAV30-201, Transcript of T cell receptor alpha variable 30, humanhuman

APPRIS P1 BASIC

Gene TRAV30, Length 337 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30-201ENST00000557168 NISCHQ9Y2I1 1504 aa12.11□□□□□ -0.47
TRAV30-201ENST00000557168 ABCC9O60706 1549 aa11.38□□□□□ -0.59
TRAV30-201ENST00000557168 DNAJC5BQ9UF47 199 aa11□□□□□ -0.65
TRAV30-201ENST00000557168 CCDC180Q9P1Z9 1646 aa10.91□□□□□ -0.66
TRAV30-201ENST00000557168 PABPN1Q86U42 306 aaKnown RBP eCLIP10.62□□□□□ -0.71
TRAV30-201ENST00000557168 DCAF8L2P0C7V8 631 aa10.58□□□□□ -0.72
TRAV30-201ENST00000557168 RB1CC1Q8TDY2 1594 aa10.56□□□□□ -0.72
TRAV30-201ENST00000557168 UNC13AQ9UPW8 1703 aa10.42□□□□□ -0.74
TRAV30-201ENST00000557168 NACADO15069 1562 aa10.4□□□□□ -0.74
TRAV30-201ENST00000557168 BICRAQ9NZM4 1560 aa10.33□□□□□ -0.76
TRAV30-201ENST00000557168 CECR2Q9BXF3 1484 aa10.22□□□□□ -0.77
TRAV30-201ENST00000557168 DNAJC5Q9H3Z4 198 aa10.21□□□□□ -0.77
TRAV30-201ENST00000557168 CC2D2AQ9P2K1 1620 aa10.21□□□□□ -0.78
TRAV30-201ENST00000557168 EIF4G1Q04637 1599 aaKnown RBP10.08□□□□□ -0.8
TRAV30-201ENST00000557168 MYO15BQ96JP2 1530 aa10.07□□□□□ -0.8
TRAV30-201ENST00000557168 SCRIBQ14160 1630 aa10.07□□□□□ -0.8
TRAV30-201ENST00000557168 SHROOM4Q9ULL8 1493 aa9.96□□□□□ -0.82
TRAV30-201ENST00000557168 ZCCHC6Q5VYS8 1495 aaKnown RBP9.95□□□□□ -0.82
TRAV30-201ENST00000557168 DCAF1Q9Y4B6 1507 aa9.87□□□□□ -0.83
TRAV30-201ENST00000557168 ERCC6Q03468 1493 aa9.79□□□□□ -0.84
TRAV30-201ENST00000557168 CUX2O14529 1486 aa9.78□□□□□ -0.84
TRAV30-201ENST00000557168 TRIM41Q8WV44 630 aa9.76□□□□□ -0.85
TRAV30-201ENST00000557168 NESP48681 1621 aa9.71□□□□□ -0.86
TRAV30-201ENST00000557168 NCAPD3P42695 1498 aa9.63□□□□□ -0.87
TRAV30-201ENST00000557168 ATAD2BQ9ULI0 1458 aa9.6□□□□□ -0.87
TRAV30-201ENST00000557168 SMARCA2P51531 1590 aa9.56□□□□□ -0.88
TRAV30-201ENST00000557168 THOC2Q8NI27 1593 aaKnown RBP9.55□□□□□ -0.88
TRAV30-201ENST00000557168 KIF21AQ7Z4S6 1674 aa9.53□□□□□ -0.88
TRAV30-201ENST00000557168 SMARCA4P51532 1647 aa9.52□□□□□ -0.89
TRAV30-201ENST00000557168 BAZ1BQ9UIG0 1483 aaKnown RBP9.49□□□□□ -0.89
TRAV30-201ENST00000557168 HMGXB3Q12766 1538 aa9.49□□□□□ -0.89
TRAV30-201ENST00000557168 LAMC3Q9Y6N6 1575 aa9.44□□□□□ -0.9
TRAV30-201ENST00000557168 PDS5BQ9NTI5 1447 aa9.42□□□□□ -0.9
TRAV30-201ENST00000557168 MROH2BQ7Z745 1585 aa9.4□□□□□ -0.9
TRAV30-201ENST00000557168 OSCARQ8IYS5 282 aa9.39□□□□□ -0.91
TRAV30-201ENST00000557168 BAZ1AQ9NRL2 1556 aaPredicted RBP9.38□□□□□ -0.91
TRAV30-201ENST00000557168 MRC2Q9UBG0 1479 aa9.37□□□□□ -0.91
TRAV30-201ENST00000557168 CADPSQ9ULU8 1353 aa9.37□□□□□ -0.91
TRAV30-201ENST00000557168 PEG3Q9GZU2 1588 aa9.34□□□□□ -0.91
TRAV30-201ENST00000557168 WDR62O43379 1518 aa9.33□□□□□ -0.92
TRAV30-201ENST00000557168 WIZO95785 1651 aa9.29□□□□□ -0.92
TRAV30-201ENST00000557168 RIMBP3CA6NJZ7 1639 aa9.29□□□□□ -0.92
TRAV30-201ENST00000557168 RIMBP3BA6NNM3 1639 aa9.29□□□□□ -0.92
TRAV30-201ENST00000557168 RIMBP3Q9UFD9 1639 aa9.29□□□□□ -0.92
TRAV30-201ENST00000557168 CEP164Q9UPV0 1460 aa9.28□□□□□ -0.92
TRAV30-201ENST00000557168 TRHP20396 242 aaPredicted RBP9.27□□□□□ -0.93
TRAV30-201ENST00000557168 CYB5RLQ6IPT4 315 aa9.27□□□□□ -0.93
TRAV30-201ENST00000557168 FANCD2Q9BXW9 1451 aa9.27□□□□□ -0.93
TRAV30-201ENST00000557168 URB2Q14146 1524 aaKnown RBP9.23□□□□□ -0.93
TRAV30-201ENST00000557168 ARHGEF11O15085 1522 aa9.21□□□□□ -0.94
TRAV30-201ENST00000557168 ZNF608Q9ULD9 1512 aaPredicted RBP9.21□□□□□ -0.94
TRAV30-201ENST00000557168 AEBP2Q6ZN18 517 aaPredicted RBP9.18□□□□□ -0.94
TRAV30-201ENST00000557168 CFTRP13569 1480 aa9.17□□□□□ -0.94
TRAV30-201ENST00000557168 FBLN2P98095 1184 aa9.16□□□□□ -0.94
TRAV30-201ENST00000557168 ARAP1Q96P48 1450 aa9.12□□□□□ -0.95
TRAV30-201ENST00000557168 CHD1O14646 1710 aa9.11□□□□□ -0.95
TRAV30-201ENST00000557168 AQRO60306 1485 aaKnown RBP eCLIP9.1□□□□□ -0.95
TRAV30-201ENST00000557168 IFT140Q96RY7 1462 aa9.08□□□□□ -0.96
TRAV30-201ENST00000557168 RSF1Q96T23 1441 aaPredicted RBP9.07□□□□□ -0.96
TRAV30-201ENST00000557168 EIF4G3O43432 1585 aaKnown RBP9.07□□□□□ -0.96
TRAV30-201ENST00000557168 TOPBP1Q92547 1522 aa9.06□□□□□ -0.96
TRAV30-201ENST00000557168 TOP2AP11388 1531 aaKnown RBP9.05□□□□□ -0.96
TRAV30-201ENST00000557168 PRDM2Q13029 1718 aa9.05□□□□□ -0.96
TRAV30-201ENST00000557168 CCDC88BA6NC98 1476 aa9.03□□□□□ -0.96
TRAV30-201ENST00000557168 RAD54L2Q9Y4B4 1467 aa9.01□□□□□ -0.97
TRAV30-201ENST00000557168 TDRD9Q8NDG6 1382 aaKnown RBP9□□□□□ -0.97
TRAV30-201ENST00000557168 TARBP1Q13395 1621 aaKnown RBP8.99□□□□□ -0.97
TRAV30-201ENST00000557168 CHMP7Q8WUX9 453 aaPredicted RBP8.97□□□□□ -0.97
TRAV30-201ENST00000557168 DNMBPQ6XZF7 1577 aa8.97□□□□□ -0.97
TRAV30-201ENST00000557168 POLA1P09884 1462 aaPredicted RBP8.96□□□□□ -0.98
TRAV30-201ENST00000557168 SNAPC4Q5SXM2 1469 aa8.95□□□□□ -0.98
TRAV30-201ENST00000557168 SOGA1O94964 1423 aa8.94□□□□□ -0.98
TRAV30-201ENST00000557168 ABCC8Q09428 1581 aa8.93□□□□□ -0.98
TRAV30-201ENST00000557168 CLASP1Q7Z460 1538 aa8.92□□□□□ -0.98
TRAV30-201ENST00000557168 GAPVD1Q14C86 1478 aa8.89□□□□□ -0.99
TRAV30-201ENST00000557168 SYNJ1O43426 1573 aa8.88□□□□□ -0.99
TRAV30-201ENST00000557168 ERCC6L2Q5T890 1561 aa8.88□□□□□ -0.99
TRAV30-201ENST00000557168 FGD5Q6ZNL6 1462 aa8.87□□□□□ -0.99
TRAV30-201ENST00000557168 GRIN2BQ13224 1484 aa8.84□□□□□ -0.99
TRAV30-201ENST00000557168 SYNJ2O15056 1496 aa8.83□□□□□ -1
TRAV30-201ENST00000557168 ILDR1Q86SU0 546 aaPredicted RBP8.83□□□□□ -1
TRAV30-201ENST00000557168 CUX1P39880 1505 aa8.83□□□□□ -1
TRAV30-201ENST00000557168 MAGI1Q96QZ7 1491 aaPredicted RBP8.83□□□□□ -1
TRAV30-201ENST00000557168 PBRM1Q86U86 1689 aa8.81□□□□□ -1
TRAV30-201ENST00000557168 KIF13AQ9H1H9 1805 aa8.8□□□□□ -1
TRAV30-201ENST00000557168 KDM4FA0A1W2PPD8 638 aa8.78□□□□□ -1
TRAV30-201ENST00000557168 WDR97A6NE52 1622 aa8.77□□□□□ -1.01
TRAV30-201ENST00000557168 FAM69CQ0P6D2 419 aa8.77□□□□□ -1.01
TRAV30-201ENST00000557168 CEP170Q5SW79 1584 aa8.76□□□□□ -1.01
TRAV30-201ENST00000557168 TSPOAP1O95153 1857 aa8.73□□□□□ -1.01
TRAV30-201ENST00000557168 GRIN2AQ12879 1464 aa8.73□□□□□ -1.01
TRAV30-201ENST00000557168 ABCA5Q8WWZ7 1642 aa8.72□□□□□ -1.01
TRAV30-201ENST00000557168 PRG4Q92954 1404 aaPredicted RBP8.71□□□□□ -1.02
TRAV30-201ENST00000557168 ABCA10Q8WWZ4 1543 aa8.7□□□□□ -1.02
TRAV30-201ENST00000557168 TTBK1Q5TCY1 1321 aaPredicted RBP8.7□□□□□ -1.02
TRAV30-201ENST00000557168 NPM1P06748 294 aaKnown RBP eCLIP8.69□□□□□ -1.02
TRAV30-201ENST00000557168 JPH4Q96JJ6 628 aa8.69□□□□□ -1.02
TRAV30-201ENST00000557168 NUP160Q12769 1436 aa8.69□□□□□ -1.02
TRAV30-201ENST00000557168 ADAMTS12P58397 1594 aa8.68□□□□□ -1.02
TRAV30-201ENST00000557168 SHROOM2Q13796 1616 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms