RNA–Protein interactions for RNA: ENST00000555677.5

IFT43-211, Transcript of intraflagellar transport 43, humanhuman

TSL 4

Gene IFT43, Length 487 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-211ENST00000555677 PPARGC1BQ86YN6 1023 aaKnown RBP23.32■■□□□ 1.32
IFT43-211ENST00000555677 RRP7BPQ9NSQ0 103 aa23.32■■□□□ 1.32
IFT43-211ENST00000555677 RNF17Q9BXT8 1623 aaKnown RBP23.32■■□□□ 1.32
IFT43-211ENST00000555677 PTPRKQ15262 1439 aa23.32■■□□□ 1.32
IFT43-211ENST00000555677 STRCQ7RTU9 1775 aa23.32■■□□□ 1.32
IFT43-211ENST00000555677 WASHC2CQ9Y4E1 1318 aa23.32■■□□□ 1.32
IFT43-211ENST00000555677 KDM5DQ9BY66 1539 aa23.31■■□□□ 1.32
IFT43-211ENST00000555677 FAM50AQ14320 339 aaKnown RBP23.3■■□□□ 1.32
IFT43-211ENST00000555677 CHIC2Q9UKJ5 165 aa23.3■■□□□ 1.32
IFT43-211ENST00000555677 FAM135AQ9P2D6 1515 aa23.29■■□□□ 1.32
IFT43-211ENST00000555677 KIF15Q9NS87 1388 aa23.28■■□□□ 1.32
IFT43-211ENST00000555677 MROH1Q8NDA8 1641 aa23.26■■□□□ 1.31
IFT43-211ENST00000555677 MYO3AQ8NEV4 1616 aa23.26■■□□□ 1.31
IFT43-211ENST00000555677 FBXO31Q5XUX0 539 aaPredicted RBP23.24■■□□□ 1.31
IFT43-211ENST00000555677 ZC3H13Q5T200 1668 aaKnown RBP23.24■■□□□ 1.31
IFT43-211ENST00000555677 CEP152O94986 1710 aa23.24■■□□□ 1.31
IFT43-211ENST00000555677 ANKRD30AQ9BXX3 1397 aa23.24■■□□□ 1.31
IFT43-211ENST00000555677 NCOA1Q15788 1441 aa23.24■■□□□ 1.31
IFT43-211ENST00000555677 CFAP65Q6ZU64 1925 aaKnown RBP23.23■■□□□ 1.31
IFT43-211ENST00000555677 ZNF142P52746 1687 aaPredicted RBP23.23■■□□□ 1.31
IFT43-211ENST00000555677 ERBINQ96RT1 1412 aa23.23■■□□□ 1.31
IFT43-211ENST00000555677 PZPP20742 1482 aa23.22■■□□□ 1.31
IFT43-211ENST00000555677 ABCC3O15438 1527 aa23.21■■□□□ 1.31
IFT43-211ENST00000555677 ADGRL2O95490 1459 aa23.2■■□□□ 1.3
IFT43-211ENST00000555677 DEPDC5O75140 1603 aa23.19■■□□□ 1.3
IFT43-211ENST00000555677 CAMSAP1Q5T5Y3 1602 aa23.19■■□□□ 1.3
IFT43-211ENST00000555677 CEP170BQ9Y4F5 1589 aaPredicted RBP23.18■■□□□ 1.3
IFT43-211ENST00000555677 DMRT2Q9Y5R5 561 aa23.17■■□□□ 1.3
IFT43-211ENST00000555677 PRDM15P57071 1507 aaPredicted RBP23.16■■□□□ 1.3
IFT43-211ENST00000555677 TNRQ92752 1358 aa23.15■■□□□ 1.3
IFT43-211ENST00000555677 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.15■■□□□ 1.3
IFT43-211ENST00000555677 A2ML1A8K2U0 1454 aa23.13■■□□□ 1.29
IFT43-211ENST00000555677 ILDR1Q86SU0 546 aaPredicted RBP23.11■■□□□ 1.29
IFT43-211ENST00000555677 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.11■■□□□ 1.29
IFT43-211ENST00000555677 PTPRTO14522 1441 aa23.1■■□□□ 1.29
IFT43-211ENST00000555677 SPATA31D1Q6ZQQ2 1576 aa23.1■■□□□ 1.29
IFT43-211ENST00000555677 NCKAP5LQ9HCH0 1330 aa23.09■■□□□ 1.29
IFT43-211ENST00000555677 KANK1Q14678 1352 aa23.09■■□□□ 1.29
IFT43-211ENST00000555677 ANKRD50Q9ULJ7 1429 aa23.08■■□□□ 1.29
IFT43-211ENST00000555677 VWDEQ8N2E2 1590 aa23.07■■□□□ 1.28
IFT43-211ENST00000555677 PLA2R1Q13018 1463 aa23.07■■□□□ 1.28
IFT43-211ENST00000555677 ITGAEP38570 1179 aa23.07■■□□□ 1.28
IFT43-211ENST00000555677 ERVK-7P63135 1459 aa23.06■■□□□ 1.28
IFT43-211ENST00000555677 NLRP1Q9C000 1473 aa23.06■■□□□ 1.28
IFT43-211ENST00000555677 ARHGAP31Q2M1Z3 1444 aa23.06■■□□□ 1.28
IFT43-211ENST00000555677 ROCK1Q13464 1354 aa23.05■■□□□ 1.28
IFT43-211ENST00000555677 PKD2Q13563 968 aa23.04■■□□□ 1.28
IFT43-211ENST00000555677 LMTK2Q8IWU2 1503 aa23.03■■□□□ 1.28
IFT43-211ENST00000555677 UGGT1Q9NYU2 1555 aa23.03■■□□□ 1.28
IFT43-211ENST00000555677 RRBP1Q9P2E9 1410 aaKnown RBP23.03■■□□□ 1.28
IFT43-211ENST00000555677 POLR1AO95602 1720 aaPredicted RBP23.02■■□□□ 1.28
IFT43-211ENST00000555677 THEMISQ8N1K5 641 aaPredicted RBP23.02■■□□□ 1.28
IFT43-211ENST00000555677 CERKQ8TCT0 537 aa23■■□□□ 1.27
IFT43-211ENST00000555677 FBXO41Q8TF61 875 aa22.98■■□□□ 1.27
IFT43-211ENST00000555677 UBR1Q8IWV7 1749 aa22.98■■□□□ 1.27
IFT43-211ENST00000555677 UNC13BO14795 1591 aa22.97■■□□□ 1.27
IFT43-211ENST00000555677 EFCAB6Q5THR3 1501 aa22.96■■□□□ 1.27
IFT43-211ENST00000555677 ANKLE2Q86XL3 938 aa22.95■■□□□ 1.26
IFT43-211ENST00000555677 NEURL4Q96JN8 1562 aa22.94■■□□□ 1.26
IFT43-211ENST00000555677 TET3O43151 1660 aa22.93■■□□□ 1.26
IFT43-211ENST00000555677 GCC2Q8IWJ2 1684 aa22.93■■□□□ 1.26
IFT43-211ENST00000555677 LTBP4Q8N2S1 1624 aa22.93■■□□□ 1.26
IFT43-211ENST00000555677 PIK3C2BO00750 1634 aa22.93■■□□□ 1.26
IFT43-211ENST00000555677 SYNMO15061 1565 aa22.91■■□□□ 1.26
IFT43-211ENST00000555677 IQGAP3Q86VI3 1631 aa22.9■■□□□ 1.26
IFT43-211ENST00000555677 IDI1Q13907 227 aa22.89■■□□□ 1.25
IFT43-211ENST00000555677 NOS1P29475 1434 aa22.89■■□□□ 1.25
IFT43-211ENST00000555677 ZNF335Q9H4Z2 1342 aaPredicted RBP22.88■■□□□ 1.25
IFT43-211ENST00000555677 E9PCH4 1651 aa22.88■■□□□ 1.25
IFT43-211ENST00000555677 RPRD2Q5VT52 1461 aaKnown RBP22.88■■□□□ 1.25
IFT43-211ENST00000555677 KDM5AP29375 1690 aaKnown RBP22.87■■□□□ 1.25
IFT43-211ENST00000555677 MED14O60244 1454 aa22.87■■□□□ 1.25
IFT43-211ENST00000555677 IQGAP1P46940 1657 aa22.85■■□□□ 1.25
IFT43-211ENST00000555677 NUP155O75694 1391 aa22.85■■□□□ 1.25
IFT43-211ENST00000555677 NPHP4O75161 1426 aaPredicted RBP22.83■■□□□ 1.25
IFT43-211ENST00000555677 SLIT1O75093 1534 aa22.83■■□□□ 1.25
IFT43-211ENST00000555677 STAG3Q9UJ98 1225 aa22.83■■□□□ 1.25
IFT43-211ENST00000555677 NAIPQ13075 1403 aa22.82■■□□□ 1.24
IFT43-211ENST00000555677 MYO5BQ9ULV0 1848 aa22.82■■□□□ 1.24
IFT43-211ENST00000555677 ARHGAP23Q9P227 1491 aa22.82■■□□□ 1.24
IFT43-211ENST00000555677 LTKP29376 864 aa22.82■■□□□ 1.24
IFT43-211ENST00000555677 SLC52A1Q9NWF4 448 aa22.82■■□□□ 1.24
IFT43-211ENST00000555677 TXNDC2Q86VQ3 553 aa22.8■■□□□ 1.24
IFT43-211ENST00000555677 SCAF11Q99590 1463 aaKnown RBP22.79■■□□□ 1.24
IFT43-211ENST00000555677 TMEM2Q9UHN6 1383 aa22.78■■□□□ 1.24
IFT43-211ENST00000555677 EID1Q9Y6B2 187 aa22.77■■□□□ 1.24
IFT43-211ENST00000555677 IQSEC2Q5JU85 1478 aa22.77■■□□□ 1.24
IFT43-211ENST00000555677 ADGRB3O60242 1522 aa22.77■■□□□ 1.24
IFT43-211ENST00000555677 HFM1A2PYH4 1435 aa22.75■■□□□ 1.23
IFT43-211ENST00000555677 TMEM131LA2VDJ0 1609 aa22.75■■□□□ 1.23
IFT43-211ENST00000555677 STRCP1A6NGW2 1772 aa22.74■■□□□ 1.23
IFT43-211ENST00000555677 SPHKAPQ2M3C7 1700 aa22.71■■□□□ 1.23
IFT43-211ENST00000555677 CPS1P31327 1500 aa22.71■■□□□ 1.23
IFT43-211ENST00000555677 CHGAP10645 457 aaKnown RBP22.67■■□□□ 1.22
IFT43-211ENST00000555677 TRIM52Q96A61 297 aa22.67■■□□□ 1.22
IFT43-211ENST00000555677 ZFYVE9O95405 1425 aa22.65■■□□□ 1.22
IFT43-211ENST00000555677 HDGFP51858 240 aaKnown RBP22.63■■□□□ 1.21
IFT43-211ENST00000555677 RIMS2Q9UQ26 1411 aa22.63■■□□□ 1.21
IFT43-211ENST00000555677 UBAP1LF5GYI3 381 aa22.61■■□□□ 1.21
IFT43-211ENST00000555677 SLC26A8Q96RN1 970 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 167.2 ms