RNA–Protein interactions for RNA: ENST00000553833.5

COCH-207, Transcript of cochlin, humanhuman

TSL 5

Gene COCH, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COCH-207ENST00000553833 CHRDL2Q6WN34 429 aa12.36□□□□□ -0.43
COCH-207ENST00000553833 NPATQ14207 1427 aa12.36□□□□□ -0.43
COCH-207ENST00000553833 MROH2AA6NES4 1674 aa12.35□□□□□ -0.43
COCH-207ENST00000553833 SAMD9LQ8IVG5 1584 aa12.35□□□□□ -0.43
COCH-207ENST00000553833 CCDC18Q5T9S5 1454 aa12.34□□□□□ -0.43
COCH-207ENST00000553833 CAMSAP1Q5T5Y3 1602 aa12.34□□□□□ -0.43
COCH-207ENST00000553833 MYT1LQ9UL68 1186 aa12.34□□□□□ -0.43
COCH-207ENST00000553833 ZMYM3Q14202 1370 aa12.32□□□□□ -0.44
COCH-207ENST00000553833 PLXNC1O60486 1568 aa12.32□□□□□ -0.44
COCH-207ENST00000553833 LRRC9Q6ZRR7 1453 aa12.32□□□□□ -0.44
COCH-207ENST00000553833 HRCP23327 699 aa12.31□□□□□ -0.44
COCH-207ENST00000553833 AKT1S1Q96B36 256 aa12.31□□□□□ -0.44
COCH-207ENST00000553833 ESF1Q9H501 851 aaKnown RBP12.31□□□□□ -0.44
COCH-207ENST00000553833 GPATCH8Q9UKJ3 1502 aaKnown RBP12.31□□□□□ -0.44
COCH-207ENST00000553833 ZNF142P52746 1687 aaPredicted RBP12.3□□□□□ -0.44
COCH-207ENST00000553833 PLA2R1Q13018 1463 aa12.3□□□□□ -0.44
COCH-207ENST00000553833 TCOF1Q13428 1488 aaKnown RBP12.3□□□□□ -0.44
COCH-207ENST00000553833 SYCP2Q9BX26 1530 aa12.3□□□□□ -0.44
COCH-207ENST00000553833 EHBP1L1Q8N3D4 1523 aa12.29□□□□□ -0.44
COCH-207ENST00000553833 INO80Q9ULG1 1556 aaPredicted RBP12.29□□□□□ -0.44
COCH-207ENST00000553833 ZNF335Q9H4Z2 1342 aaPredicted RBP12.29□□□□□ -0.44
COCH-207ENST00000553833 NCKAP5LQ9HCH0 1330 aa12.29□□□□□ -0.44
COCH-207ENST00000553833 PTPRKQ15262 1439 aa12.28□□□□□ -0.44
COCH-207ENST00000553833 RRBP1Q9P2E9 1410 aaKnown RBP12.28□□□□□ -0.44
COCH-207ENST00000553833 KIAA1107Q9UPP5 1409 aa12.28□□□□□ -0.44
COCH-207ENST00000553833 MYO3AQ8NEV4 1616 aa12.28□□□□□ -0.44
COCH-207ENST00000553833 SUPT6HQ7KZ85 1726 aaKnown RBP12.28□□□□□ -0.44
COCH-207ENST00000553833 ATP7AQ04656 1500 aa12.27□□□□□ -0.44
COCH-207ENST00000553833 CLTCQ00610 1675 aaKnown RBP12.27□□□□□ -0.45
COCH-207ENST00000553833 HNRNPMP52272 730 aaKnown RBP eCLIP12.27□□□□□ -0.45
COCH-207ENST00000553833 KANK4Q5T7N3 995 aaPredicted RBP12.27□□□□□ -0.45
COCH-207ENST00000553833 SPAG9O60271 1321 aaKnown RBP12.27□□□□□ -0.45
COCH-207ENST00000553833 CEP170BQ9Y4F5 1589 aaPredicted RBP12.26□□□□□ -0.45
COCH-207ENST00000553833 A2MP01023 1474 aa12.26□□□□□ -0.45
COCH-207ENST00000553833 PKD2Q13563 968 aa12.25□□□□□ -0.45
COCH-207ENST00000553833 ATXN8OSP0DMR3 200 aa12.24□□□□□ -0.45
COCH-207ENST00000553833 ZNF777Q9ULD5 760 aaPredicted RBP12.24□□□□□ -0.45
COCH-207ENST00000553833 PLEKHH2Q8IVE3 1493 aa12.23□□□□□ -0.45
COCH-207ENST00000553833 UBAP1LF5GYI3 381 aa12.23□□□□□ -0.45
COCH-207ENST00000553833 ZBTB22O15209 634 aa12.22□□□□□ -0.45
COCH-207ENST00000553833 DNMT1P26358 1616 aaKnown RBP12.22□□□□□ -0.45
COCH-207ENST00000553833 MBD5Q9P267 1494 aa12.21□□□□□ -0.45
COCH-207ENST00000553833 A2ML1A8K2U0 1454 aa12.21□□□□□ -0.46
COCH-207ENST00000553833 ADGBQ8N7X0 1667 aa12.2□□□□□ -0.46
COCH-207ENST00000553833 GGT6Q6P531 493 aa12.2□□□□□ -0.46
COCH-207ENST00000553833 CFDP1Q9UEE9 299 aaPredicted RBP12.2□□□□□ -0.46
COCH-207ENST00000553833 NEURL4Q96JN8 1562 aa12.2□□□□□ -0.46
COCH-207ENST00000553833 CCNB3Q8WWL7 1395 aa12.18□□□□□ -0.46
COCH-207ENST00000553833 ZNF644Q9H582 1327 aaPredicted RBP12.18□□□□□ -0.46
COCH-207ENST00000553833 RTEL1-TNFRSF6BF6WH68 1400 aa12.18□□□□□ -0.46
COCH-207ENST00000553833 MTUS2Q5JR59 1369 aa12.17□□□□□ -0.46
COCH-207ENST00000553833 DHX29Q7Z478 1369 aaKnown RBP12.17□□□□□ -0.46
COCH-207ENST00000553833 POLR1AO95602 1720 aaPredicted RBP12.16□□□□□ -0.46
COCH-207ENST00000553833 ALKQ9UM73 1620 aa12.15□□□□□ -0.46
COCH-207ENST00000553833 NCOA2Q15596 1464 aa12.15□□□□□ -0.46
COCH-207ENST00000553833 MED1Q15648 1581 aaPredicted RBP12.15□□□□□ -0.46
COCH-207ENST00000553833 HSPA1LP34931 641 aa12.15□□□□□ -0.46
COCH-207ENST00000553833 CPS1P31327 1500 aa12.15□□□□□ -0.46
COCH-207ENST00000553833 PZPP20742 1482 aa12.14□□□□□ -0.47
COCH-207ENST00000553833 SHANK2Q9UPX8 1470 aa12.14□□□□□ -0.47
COCH-207ENST00000553833 FBXO31Q5XUX0 539 aaPredicted RBP12.14□□□□□ -0.47
COCH-207ENST00000553833 REM2Q8IYK8 340 aaPredicted RBP12.14□□□□□ -0.47
COCH-207ENST00000553833 FAM135AQ9P2D6 1515 aa12.14□□□□□ -0.47
COCH-207ENST00000553833 VWDEQ8N2E2 1590 aa12.13□□□□□ -0.47
COCH-207ENST00000553833 PTPN23Q9H3S7 1636 aa12.13□□□□□ -0.47
COCH-207ENST00000553833 TNRQ92752 1358 aa12.13□□□□□ -0.47
COCH-207ENST00000553833 MED14O60244 1454 aa12.13□□□□□ -0.47
COCH-207ENST00000553833 FGD6Q6ZV73 1430 aa12.12□□□□□ -0.47
COCH-207ENST00000553833 MYOM3Q5VTT5 1437 aa12.11□□□□□ -0.47
COCH-207ENST00000553833 KDM5DQ9BY66 1539 aa12.11□□□□□ -0.47
COCH-207ENST00000553833 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.1□□□□□ -0.47
COCH-207ENST00000553833 TOM1O60784 492 aa12.1□□□□□ -0.47
COCH-207ENST00000553833 ZEB1P37275 1124 aaPredicted RBP12.1□□□□□ -0.47
COCH-207ENST00000553833 DEPDC5O75140 1603 aa12.1□□□□□ -0.47
COCH-207ENST00000553833 MIA2Q96PC5 1412 aa12.1□□□□□ -0.47
COCH-207ENST00000553833 KIF3BO15066 747 aa12.09□□□□□ -0.47
COCH-207ENST00000553833 PIP4K2BP78356 416 aa12.09□□□□□ -0.47
COCH-207ENST00000553833 CCDC141Q6ZP82 1450 aa12.08□□□□□ -0.47
COCH-207ENST00000553833 NLRP1Q9C000 1473 aa12.08□□□□□ -0.47
COCH-207ENST00000553833 ANKLE2Q86XL3 938 aa12.08□□□□□ -0.48
COCH-207ENST00000553833 UGGT1Q9NYU2 1555 aa12.08□□□□□ -0.48
COCH-207ENST00000553833 STRCP1A6NGW2 1772 aa12.07□□□□□ -0.48
COCH-207ENST00000553833 NPHP4O75161 1426 aaPredicted RBP12.07□□□□□ -0.48
COCH-207ENST00000553833 CAMSAP2Q08AD1 1489 aa12.07□□□□□ -0.48
COCH-207ENST00000553833 GCC2Q8IWJ2 1684 aa12.06□□□□□ -0.48
COCH-207ENST00000553833 THEMISQ8N1K5 641 aaPredicted RBP12.06□□□□□ -0.48
COCH-207ENST00000553833 WASHC2CQ9Y4E1 1318 aa12.06□□□□□ -0.48
COCH-207ENST00000553833 RSPH4AQ5TD94 716 aa12.05□□□□□ -0.48
COCH-207ENST00000553833 IQGAP1P46940 1657 aa12.05□□□□□ -0.48
COCH-207ENST00000553833 LRRC7Q96NW7 1537 aa12.05□□□□□ -0.48
COCH-207ENST00000553833 ARHGEF5Q12774 1597 aa12.05□□□□□ -0.48
COCH-207ENST00000553833 RNF17Q9BXT8 1623 aaKnown RBP12.04□□□□□ -0.48
COCH-207ENST00000553833 CROCC2H7BZ55 1655 aa12.03□□□□□ -0.48
COCH-207ENST00000553833 ABCC3O15438 1527 aa12.03□□□□□ -0.48
COCH-207ENST00000553833 PIP4P2Q8N4L2 257 aa12.03□□□□□ -0.48
COCH-207ENST00000553833 CCER1Q8TC90 406 aaPredicted RBP12.03□□□□□ -0.48
COCH-207ENST00000553833 ZC3H13Q5T200 1668 aaKnown RBP12.03□□□□□ -0.48
COCH-207ENST00000553833 MROH1Q8NDA8 1641 aa12.02□□□□□ -0.49
COCH-207ENST00000553833 SYNMO15061 1565 aa12.01□□□□□ -0.49
COCH-207ENST00000553833 ERVK-7P63135 1459 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms