RNA–Protein interactions for RNA: ENST00000553802.5

LGMN-204, Transcript of legumain, humanhuman

TSL 3

Gene LGMN, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-204ENST00000553802 KDM5DQ9BY66 1539 aa24.59■■□□□ 1.53
LGMN-204ENST00000553802 TCOF1Q13428 1488 aaKnown RBP24.58■■□□□ 1.53
LGMN-204ENST00000553802 SHANK2Q9UPX8 1470 aa24.58■■□□□ 1.53
LGMN-204ENST00000553802 DNMT1P26358 1616 aaKnown RBP24.58■■□□□ 1.53
LGMN-204ENST00000553802 ZNF142P52746 1687 aaPredicted RBP24.58■■□□□ 1.53
LGMN-204ENST00000553802 PTPRKQ15262 1439 aa24.58■■□□□ 1.53
LGMN-204ENST00000553802 FAM135AQ9P2D6 1515 aa24.57■■□□□ 1.52
LGMN-204ENST00000553802 ABCC5O15440 1437 aa24.57■■□□□ 1.52
LGMN-204ENST00000553802 DAPK1P53355 1430 aa24.57■■□□□ 1.52
LGMN-204ENST00000553802 NCOA1Q15788 1441 aa24.57■■□□□ 1.52
LGMN-204ENST00000553802 EIF2AK4Q9P2K8 1649 aaKnown RBP24.57■■□□□ 1.52
LGMN-204ENST00000553802 PTPRTO14522 1441 aa24.56■■□□□ 1.52
LGMN-204ENST00000553802 CAMSAP1Q5T5Y3 1602 aa24.56■■□□□ 1.52
LGMN-204ENST00000553802 DUOX2Q9NRD8 1548 aa24.56■■□□□ 1.52
LGMN-204ENST00000553802 FAM50AQ14320 339 aaKnown RBP24.55■■□□□ 1.52
LGMN-204ENST00000553802 KIF15Q9NS87 1388 aa24.54■■□□□ 1.52
LGMN-204ENST00000553802 RNF17Q9BXT8 1623 aaKnown RBP24.53■■□□□ 1.52
LGMN-204ENST00000553802 CEP170BQ9Y4F5 1589 aaPredicted RBP24.52■■□□□ 1.52
LGMN-204ENST00000553802 RRP7BPQ9NSQ0 103 aa24.52■■□□□ 1.52
LGMN-204ENST00000553802 CHIC2Q9UKJ5 165 aa24.5■■□□□ 1.51
LGMN-204ENST00000553802 ZC3H13Q5T200 1668 aaKnown RBP24.5■■□□□ 1.51
LGMN-204ENST00000553802 ANKRD30AQ9BXX3 1397 aa24.49■■□□□ 1.51
LGMN-204ENST00000553802 PZPP20742 1482 aa24.48■■□□□ 1.51
LGMN-204ENST00000553802 ERBINQ96RT1 1412 aa24.47■■□□□ 1.51
LGMN-204ENST00000553802 ABCC3O15438 1527 aa24.45■■□□□ 1.5
LGMN-204ENST00000553802 TNRQ92752 1358 aa24.44■■□□□ 1.5
LGMN-204ENST00000553802 LTBP4Q8N2S1 1624 aa24.44■■□□□ 1.5
LGMN-204ENST00000553802 PLA2R1Q13018 1463 aa24.44■■□□□ 1.5
LGMN-204ENST00000553802 NCKAP5LQ9HCH0 1330 aa24.43■■□□□ 1.5
LGMN-204ENST00000553802 FBXO31Q5XUX0 539 aaPredicted RBP24.43■■□□□ 1.5
LGMN-204ENST00000553802 PPARGC1BQ86YN6 1023 aaKnown RBP24.43■■□□□ 1.5
LGMN-204ENST00000553802 CEP152O94986 1710 aa24.43■■□□□ 1.5
LGMN-204ENST00000553802 A2ML1A8K2U0 1454 aa24.42■■□□□ 1.5
LGMN-204ENST00000553802 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.41■■□□□ 1.5
LGMN-204ENST00000553802 MROH1Q8NDA8 1641 aa24.4■■□□□ 1.5
LGMN-204ENST00000553802 KANK1Q14678 1352 aa24.39■■□□□ 1.49
LGMN-204ENST00000553802 PRDM15P57071 1507 aaPredicted RBP24.38■■□□□ 1.49
LGMN-204ENST00000553802 CFAP65Q6ZU64 1925 aaKnown RBP24.37■■□□□ 1.49
LGMN-204ENST00000553802 PKD2Q13563 968 aa24.36■■□□□ 1.49
LGMN-204ENST00000553802 ADGRL2O95490 1459 aa24.36■■□□□ 1.49
LGMN-204ENST00000553802 POLR1AO95602 1720 aaPredicted RBP24.35■■□□□ 1.49
LGMN-204ENST00000553802 DEPDC5O75140 1603 aa24.35■■□□□ 1.49
LGMN-204ENST00000553802 NLRP1Q9C000 1473 aa24.33■■□□□ 1.49
LGMN-204ENST00000553802 ERVK-7P63135 1459 aa24.31■■□□□ 1.48
LGMN-204ENST00000553802 ZNF335Q9H4Z2 1342 aaPredicted RBP24.31■■□□□ 1.48
LGMN-204ENST00000553802 SPATA31D1Q6ZQQ2 1576 aa24.3■■□□□ 1.48
LGMN-204ENST00000553802 ITGAEP38570 1179 aa24.3■■□□□ 1.48
LGMN-204ENST00000553802 IQSEC2Q5JU85 1478 aa24.3■■□□□ 1.48
LGMN-204ENST00000553802 UGGT1Q9NYU2 1555 aa24.29■■□□□ 1.48
LGMN-204ENST00000553802 ANKRD50Q9ULJ7 1429 aa24.29■■□□□ 1.48
LGMN-204ENST00000553802 NEURL4Q96JN8 1562 aa24.29■■□□□ 1.48
LGMN-204ENST00000553802 THEMISQ8N1K5 641 aaPredicted RBP24.28■■□□□ 1.48
LGMN-204ENST00000553802 ARHGAP31Q2M1Z3 1444 aa24.25■■□□□ 1.47
LGMN-204ENST00000553802 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.23■■□□□ 1.47
LGMN-204ENST00000553802 ROCK1Q13464 1354 aa24.22■■□□□ 1.47
LGMN-204ENST00000553802 ANKLE2Q86XL3 938 aa24.22■■□□□ 1.47
LGMN-204ENST00000553802 VWDEQ8N2E2 1590 aa24.2■■□□□ 1.47
LGMN-204ENST00000553802 LMTK2Q8IWU2 1503 aa24.2■■□□□ 1.47
LGMN-204ENST00000553802 STAG3Q9UJ98 1225 aa24.18■■□□□ 1.46
LGMN-204ENST00000553802 EFCAB6Q5THR3 1501 aa24.18■■□□□ 1.46
LGMN-204ENST00000553802 UBR1Q8IWV7 1749 aa24.16■■□□□ 1.46
LGMN-204ENST00000553802 MED14O60244 1454 aa24.14■■□□□ 1.46
LGMN-204ENST00000553802 IQGAP1P46940 1657 aa24.14■■□□□ 1.45
LGMN-204ENST00000553802 UNC13BO14795 1591 aa24.13■■□□□ 1.45
LGMN-204ENST00000553802 RRBP1Q9P2E9 1410 aaKnown RBP24.13■■□□□ 1.45
LGMN-204ENST00000553802 TET3O43151 1660 aa24.12■■□□□ 1.45
LGMN-204ENST00000553802 NPHP4O75161 1426 aaPredicted RBP24.12■■□□□ 1.45
LGMN-204ENST00000553802 PIK3C2BO00750 1634 aa24.11■■□□□ 1.45
LGMN-204ENST00000553802 CPS1P31327 1500 aa24.1■■□□□ 1.45
LGMN-204ENST00000553802 GCC2Q8IWJ2 1684 aa24.1■■□□□ 1.45
LGMN-204ENST00000553802 RPRD2Q5VT52 1461 aaKnown RBP24.09■■□□□ 1.45
LGMN-204ENST00000553802 UBAP1LF5GYI3 381 aa24.09■■□□□ 1.45
LGMN-204ENST00000553802 EID1Q9Y6B2 187 aa24.07■■□□□ 1.44
LGMN-204ENST00000553802 SYNMO15061 1565 aa24.07■■□□□ 1.44
LGMN-204ENST00000553802 SCAF11Q99590 1463 aaKnown RBP24.06■■□□□ 1.44
LGMN-204ENST00000553802 NUP155O75694 1391 aa24.05■■□□□ 1.44
LGMN-204ENST00000553802 NOS1P29475 1434 aa24.05■■□□□ 1.44
LGMN-204ENST00000553802 IDI1Q13907 227 aa24.05■■□□□ 1.44
LGMN-204ENST00000553802 STRCP1A6NGW2 1772 aa24.05■■□□□ 1.44
LGMN-204ENST00000553802 IQGAP3Q86VI3 1631 aa24.05■■□□□ 1.44
LGMN-204ENST00000553802 KDM5AP29375 1690 aaKnown RBP24.05■■□□□ 1.44
LGMN-204ENST00000553802 TXNDC2Q86VQ3 553 aa24.04■■□□□ 1.44
LGMN-204ENST00000553802 SLC52A1Q9NWF4 448 aa24.04■■□□□ 1.44
LGMN-204ENST00000553802 SLIT1O75093 1534 aa24.03■■□□□ 1.44
LGMN-204ENST00000553802 ARHGAP23Q9P227 1491 aa24.02■■□□□ 1.44
LGMN-204ENST00000553802 ADGRB3O60242 1522 aa24■■□□□ 1.43
LGMN-204ENST00000553802 E9PCH4 1651 aa24■■□□□ 1.43
LGMN-204ENST00000553802 DISP3Q9P2K9 1392 aa24■■□□□ 1.43
LGMN-204ENST00000553802 TMEM2Q9UHN6 1383 aa24■■□□□ 1.43
LGMN-204ENST00000553802 LTKP29376 864 aa23.97■■□□□ 1.43
LGMN-204ENST00000553802 CHGAP10645 457 aaKnown RBP23.95■■□□□ 1.42
LGMN-204ENST00000553802 ALKQ9UM73 1620 aa23.93■■□□□ 1.42
LGMN-204ENST00000553802 BCANQ96GW7 911 aa23.93■■□□□ 1.42
LGMN-204ENST00000553802 MYO5BQ9ULV0 1848 aa23.93■■□□□ 1.42
LGMN-204ENST00000553802 NAIPQ13075 1403 aa23.93■■□□□ 1.42
LGMN-204ENST00000553802 LRRC7Q96NW7 1537 aa23.92■■□□□ 1.42
LGMN-204ENST00000553802 TOM1O60784 492 aa23.91■■□□□ 1.42
LGMN-204ENST00000553802 PPP1R15AO75807 674 aaPredicted RBP23.91■■□□□ 1.42
LGMN-204ENST00000553802 PIP4K2BP78356 416 aa23.91■■□□□ 1.42
LGMN-204ENST00000553802 SCAF1Q9H7N4 1312 aaKnown RBP23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms