RNA–Protein interactions for RNA: ENST00000553444.1

HNRNPC-206, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-206ENST00000553444 SCAF1Q9H7N4 1312 aaKnown RBP19■□□□□ 0.63
HNRNPC-206ENST00000553444 CPS1P31327 1500 aa18.99■□□□□ 0.63
HNRNPC-206ENST00000553444 SHANK2Q9UPX8 1470 aa18.98■□□□□ 0.63
HNRNPC-206ENST00000553444 KIF3BO15066 747 aa18.97■□□□□ 0.63
HNRNPC-206ENST00000553444 PZPP20742 1482 aa18.97■□□□□ 0.63
HNRNPC-206ENST00000553444 NEURL4Q96JN8 1562 aa18.96■□□□□ 0.63
HNRNPC-206ENST00000553444 TIAM1Q13009 1591 aa18.95■□□□□ 0.62
HNRNPC-206ENST00000553444 MED1Q15648 1581 aaPredicted RBP18.95■□□□□ 0.62
HNRNPC-206ENST00000553444 ANKLE2Q86XL3 938 aa18.95■□□□□ 0.62
HNRNPC-206ENST00000553444 ADGBQ8N7X0 1667 aa18.95■□□□□ 0.62
HNRNPC-206ENST00000553444 CEP162Q5TB80 1403 aa18.94■□□□□ 0.62
HNRNPC-206ENST00000553444 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.93■□□□□ 0.62
HNRNPC-206ENST00000553444 KDM5DQ9BY66 1539 aa18.93■□□□□ 0.62
HNRNPC-206ENST00000553444 FAM135AQ9P2D6 1515 aa18.93■□□□□ 0.62
HNRNPC-206ENST00000553444 MIA2Q96PC5 1412 aa18.92■□□□□ 0.62
HNRNPC-206ENST00000553444 THEMISQ8N1K5 641 aaPredicted RBP18.92■□□□□ 0.62
HNRNPC-206ENST00000553444 WASHC2CQ9Y4E1 1318 aa18.92■□□□□ 0.62
HNRNPC-206ENST00000553444 EHBP1L1Q8N3D4 1523 aa18.91■□□□□ 0.62
HNRNPC-206ENST00000553444 CCDC141Q6ZP82 1450 aa18.9■□□□□ 0.62
HNRNPC-206ENST00000553444 NPHP4O75161 1426 aaPredicted RBP18.9■□□□□ 0.62
HNRNPC-206ENST00000553444 NLRP1Q9C000 1473 aa18.9■□□□□ 0.62
HNRNPC-206ENST00000553444 VWDEQ8N2E2 1590 aa18.89■□□□□ 0.62
HNRNPC-206ENST00000553444 RSPH4AQ5TD94 716 aa18.89■□□□□ 0.61
HNRNPC-206ENST00000553444 MED14O60244 1454 aa18.89■□□□□ 0.61
HNRNPC-206ENST00000553444 ALKQ9UM73 1620 aa18.86■□□□□ 0.61
HNRNPC-206ENST00000553444 UGGT1Q9NYU2 1555 aa18.85■□□□□ 0.61
HNRNPC-206ENST00000553444 CAMSAP2Q08AD1 1489 aa18.85■□□□□ 0.61
HNRNPC-206ENST00000553444 PHF23Q9BUL5 403 aaPredicted RBP18.85■□□□□ 0.61
HNRNPC-206ENST00000553444 NCOA2Q15596 1464 aa18.83■□□□□ 0.6
HNRNPC-206ENST00000553444 POLR1AO95602 1720 aaPredicted RBP18.83■□□□□ 0.6
HNRNPC-206ENST00000553444 DEPDC5O75140 1603 aa18.82■□□□□ 0.6
HNRNPC-206ENST00000553444 TSPY4P0CV99 314 aa18.81■□□□□ 0.6
HNRNPC-206ENST00000553444 TSPY10P0CW01 314 aa18.81■□□□□ 0.6
HNRNPC-206ENST00000553444 LRRC7Q96NW7 1537 aa18.79■□□□□ 0.6
HNRNPC-206ENST00000553444 ABCC3O15438 1527 aa18.77■□□□□ 0.6
HNRNPC-206ENST00000553444 ERVK-7P63135 1459 aa18.77■□□□□ 0.59
HNRNPC-206ENST00000553444 SENP3Q9H4L4 574 aaPredicted RBP18.76■□□□□ 0.59
HNRNPC-206ENST00000553444 ARHGEF5Q12774 1597 aa18.76■□□□□ 0.59
HNRNPC-206ENST00000553444 IQGAP1P46940 1657 aa18.74■□□□□ 0.59
HNRNPC-206ENST00000553444 RNF17Q9BXT8 1623 aaKnown RBP18.71■□□□□ 0.59
HNRNPC-206ENST00000553444 RGS17Q9UGC6 210 aaPredicted RBP18.71■□□□□ 0.59
HNRNPC-206ENST00000553444 SYNMO15061 1565 aa18.71■□□□□ 0.59
HNRNPC-206ENST00000553444 SCAF11Q99590 1463 aaKnown RBP18.71■□□□□ 0.59
HNRNPC-206ENST00000553444 LTKP29376 864 aa18.7■□□□□ 0.58
HNRNPC-206ENST00000553444 MAST1Q9Y2H9 1570 aa18.68■□□□□ 0.58
HNRNPC-206ENST00000553444 ARHGAP23Q9P227 1491 aa18.67■□□□□ 0.58
HNRNPC-206ENST00000553444 TXNDC2Q86VQ3 553 aa18.67■□□□□ 0.58
HNRNPC-206ENST00000553444 STRCP1A6NGW2 1772 aa18.67■□□□□ 0.58
HNRNPC-206ENST00000553444 MROH1Q8NDA8 1641 aa18.67■□□□□ 0.58
HNRNPC-206ENST00000553444 ZC3H13Q5T200 1668 aaKnown RBP18.66■□□□□ 0.58
HNRNPC-206ENST00000553444 SLIT1O75093 1534 aa18.65■□□□□ 0.58
HNRNPC-206ENST00000553444 LRRC9Q6ZRR7 1453 aa18.65■□□□□ 0.58
HNRNPC-206ENST00000553444 ARHGAP31Q2M1Z3 1444 aa18.64■□□□□ 0.57
HNRNPC-206ENST00000553444 EIF2AK4Q9P2K8 1649 aaKnown RBP18.63■□□□□ 0.57
HNRNPC-206ENST00000553444 EID1Q9Y6B2 187 aa18.62■□□□□ 0.57
HNRNPC-206ENST00000553444 FAM135BQ49AJ0 1406 aa18.62■□□□□ 0.57
HNRNPC-206ENST00000553444 DUOX2Q9NRD8 1548 aa18.6■□□□□ 0.57
HNRNPC-206ENST00000553444 TMEM2Q9UHN6 1383 aa18.6■□□□□ 0.57
HNRNPC-206ENST00000553444 UBR1Q8IWV7 1749 aa18.6■□□□□ 0.57
HNRNPC-206ENST00000553444 MYOM3Q5VTT5 1437 aa18.59■□□□□ 0.57
HNRNPC-206ENST00000553444 KANK4Q5T7N3 995 aaPredicted RBP18.59■□□□□ 0.57
HNRNPC-206ENST00000553444 VPS8Q8N3P4 1428 aa18.58■□□□□ 0.57
HNRNPC-206ENST00000553444 TMEM94Q12767 1356 aa18.58■□□□□ 0.57
HNRNPC-206ENST00000553444 KIF15Q9NS87 1388 aa18.58■□□□□ 0.57
HNRNPC-206ENST00000553444 POTEAQ6S8J7 498 aa18.57■□□□□ 0.56
HNRNPC-206ENST00000553444 PRDM15P57071 1507 aaPredicted RBP18.57■□□□□ 0.56
HNRNPC-206ENST00000553444 ERBINQ96RT1 1412 aa18.57■□□□□ 0.56
HNRNPC-206ENST00000553444 KCNA6P17658 529 aa18.56■□□□□ 0.56
HNRNPC-206ENST00000553444 RRP7BPQ9NSQ0 103 aa18.54■□□□□ 0.56
HNRNPC-206ENST00000553444 STAG3Q9UJ98 1225 aa18.54■□□□□ 0.56
HNRNPC-206ENST00000553444 ABCC5O15440 1437 aa18.53■□□□□ 0.56
HNRNPC-206ENST00000553444 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.53■□□□□ 0.562e-26■■□□□ 12.8
HNRNPC-206ENST00000553444 CEP152O94986 1710 aa18.52■□□□□ 0.56
HNRNPC-206ENST00000553444 IDI1Q13907 227 aa18.52■□□□□ 0.56
HNRNPC-206ENST00000553444 MAP3K1Q13233 1512 aa18.52■□□□□ 0.56
HNRNPC-206ENST00000553444 SLC26A8Q96RN1 970 aa18.51■□□□□ 0.55
HNRNPC-206ENST00000553444 PROSER2Q86WR7 435 aaPredicted RBP18.5■□□□□ 0.55
HNRNPC-206ENST00000553444 RBM33Q96EV2 1170 aaKnown RBP18.5■□□□□ 0.55
HNRNPC-206ENST00000553444 EFCAB6Q5THR3 1501 aa18.49■□□□□ 0.55
HNRNPC-206ENST00000553444 KANK1Q14678 1352 aa18.49■□□□□ 0.55
HNRNPC-206ENST00000553444 PIK3C2BO00750 1634 aa18.49■□□□□ 0.55
HNRNPC-206ENST00000553444 LMTK2Q8IWU2 1503 aa18.48■□□□□ 0.55
HNRNPC-206ENST00000553444 XIRP1Q702N8 1843 aaKnown RBP18.47■□□□□ 0.55
HNRNPC-206ENST00000553444 TET3O43151 1660 aa18.47■□□□□ 0.55
HNRNPC-206ENST00000553444 NOS1P29475 1434 aa18.46■□□□□ 0.55
HNRNPC-206ENST00000553444 NKTRP30414 1462 aaKnown RBP18.46■□□□□ 0.54
HNRNPC-206ENST00000553444 DAPK1P53355 1430 aa18.45■□□□□ 0.54
HNRNPC-206ENST00000553444 MSH6P52701 1360 aa18.43■□□□□ 0.54
HNRNPC-206ENST00000553444 SLAIN2Q9P270 581 aa18.43■□□□□ 0.54
HNRNPC-206ENST00000553444 JCADQ9P266 1359 aa18.42■□□□□ 0.54
HNRNPC-206ENST00000553444 ROBO1Q9Y6N7 1651 aa18.42■□□□□ 0.54
HNRNPC-206ENST00000553444 SLC52A1Q9NWF4 448 aa18.42■□□□□ 0.54
HNRNPC-206ENST00000553444 NWD1Q149M9 1564 aa18.42■□□□□ 0.54
HNRNPC-206ENST00000553444 ANKRD30AQ9BXX3 1397 aa18.42■□□□□ 0.54
HNRNPC-206ENST00000553444 LOC105371045A0A1W2PR82 267 aa18.41■□□□□ 0.54
HNRNPC-206ENST00000553444 CFAP65Q6ZU64 1925 aaKnown RBP18.41■□□□□ 0.54
HNRNPC-206ENST00000553444 KDM5AP29375 1690 aaKnown RBP18.41■□□□□ 0.54
HNRNPC-206ENST00000553444 ADGRB3O60242 1522 aa18.4■□□□□ 0.54
HNRNPC-206ENST00000553444 CHIC2Q9UKJ5 165 aa18.4■□□□□ 0.54
HNRNPC-206ENST00000553444 BCANQ96GW7 911 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms