RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 DNMT1P26358 1616 aaKnown RBP20.34■□□□□ 0.85
HNRNPC-205ENST00000553300 PTPRKQ15262 1439 aa20.34■□□□□ 0.85
HNRNPC-205ENST00000553300 KDM5DQ9BY66 1539 aa20.34■□□□□ 0.85
HNRNPC-205ENST00000553300 EIF2AK4Q9P2K8 1649 aaKnown RBP20.34■□□□□ 0.85
HNRNPC-205ENST00000553300 CROCC2H7BZ55 1655 aa20.33■□□□□ 0.84
HNRNPC-205ENST00000553300 KIF15Q9NS87 1388 aa20.31■□□□□ 0.84
HNRNPC-205ENST00000553300 RNF17Q9BXT8 1623 aaKnown RBP20.31■□□□□ 0.84
HNRNPC-205ENST00000553300 ANKRD30AQ9BXX3 1397 aa20.29■□□□□ 0.84
HNRNPC-205ENST00000553300 RRP7BPQ9NSQ0 103 aa20.29■□□□□ 0.84
HNRNPC-205ENST00000553300 ERBINQ96RT1 1412 aa20.29■□□□□ 0.84
HNRNPC-205ENST00000553300 FAM50AQ14320 339 aaKnown RBP20.28■□□□□ 0.84
HNRNPC-205ENST00000553300 PZPP20742 1482 aa20.28■□□□□ 0.84
HNRNPC-205ENST00000553300 ZC3H13Q5T200 1668 aaKnown RBP20.26■□□□□ 0.83
HNRNPC-205ENST00000553300 STRCQ7RTU9 1775 aa20.26■□□□□ 0.83
HNRNPC-205ENST00000553300 NCOA1Q15788 1441 aa20.24■□□□□ 0.83
HNRNPC-205ENST00000553300 CHIC2Q9UKJ5 165 aa20.24■□□□□ 0.83
HNRNPC-205ENST00000553300 MYO3AQ8NEV4 1616 aa20.24■□□□□ 0.83
HNRNPC-205ENST00000553300 ZNF142P52746 1687 aaPredicted RBP20.24■□□□□ 0.83
HNRNPC-205ENST00000553300 PTPRTO14522 1441 aa20.23■□□□□ 0.83
HNRNPC-205ENST00000553300 ABCC3O15438 1527 aa20.23■□□□□ 0.83
HNRNPC-205ENST00000553300 FBXO31Q5XUX0 539 aaPredicted RBP20.22■□□□□ 0.83
HNRNPC-205ENST00000553300 ILDR1Q86SU0 546 aaPredicted RBP20.22■□□□□ 0.83
HNRNPC-205ENST00000553300 TNRQ92752 1358 aa20.22■□□□□ 0.83
HNRNPC-205ENST00000553300 CEP170BQ9Y4F5 1589 aaPredicted RBP20.22■□□□□ 0.83
HNRNPC-205ENST00000553300 ADGRL2O95490 1459 aa20.21■□□□□ 0.83
HNRNPC-205ENST00000553300 CAMSAP1Q5T5Y3 1602 aa20.21■□□□□ 0.83
HNRNPC-205ENST00000553300 A2ML1A8K2U0 1454 aa20.21■□□□□ 0.83
HNRNPC-205ENST00000553300 MROH1Q8NDA8 1641 aa20.2■□□□□ 0.82
HNRNPC-205ENST00000553300 PKD2Q13563 968 aa20.2■□□□□ 0.82
HNRNPC-205ENST00000553300 PLA2R1Q13018 1463 aa20.19■□□□□ 0.82
HNRNPC-205ENST00000553300 KANK1Q14678 1352 aa20.19■□□□□ 0.82
HNRNPC-205ENST00000553300 PRDM15P57071 1507 aaPredicted RBP20.19■□□□□ 0.82
HNRNPC-205ENST00000553300 NLRP1Q9C000 1473 aa20.17■□□□□ 0.82
HNRNPC-205ENST00000553300 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.17■□□□□ 0.822e-10■□□□□ 8.9
HNRNPC-205ENST00000553300 DEPDC5O75140 1603 aa20.16■□□□□ 0.82
HNRNPC-205ENST00000553300 FBXO41Q8TF61 875 aa20.16■□□□□ 0.82
HNRNPC-205ENST00000553300 ARHGAP31Q2M1Z3 1444 aa20.15■□□□□ 0.82
HNRNPC-205ENST00000553300 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.15■□□□□ 0.822e-26■■□□□ 11.8
HNRNPC-205ENST00000553300 THEMISQ8N1K5 641 aaPredicted RBP20.14■□□□□ 0.81
HNRNPC-205ENST00000553300 SPATA31D1Q6ZQQ2 1576 aa20.14■□□□□ 0.81
HNRNPC-205ENST00000553300 CEP152O94986 1710 aa20.14■□□□□ 0.81
HNRNPC-205ENST00000553300 PPARGC1BQ86YN6 1023 aaKnown RBP20.13■□□□□ 0.81
HNRNPC-205ENST00000553300 ANKRD50Q9ULJ7 1429 aa20.13■□□□□ 0.81
HNRNPC-205ENST00000553300 CERKQ8TCT0 537 aa20.12■□□□□ 0.81
HNRNPC-205ENST00000553300 NCKAP5LQ9HCH0 1330 aa20.12■□□□□ 0.81
HNRNPC-205ENST00000553300 ROCK1Q13464 1354 aa20.12■□□□□ 0.81
HNRNPC-205ENST00000553300 ERVK-7P63135 1459 aa20.12■□□□□ 0.81
HNRNPC-205ENST00000553300 UGGT1Q9NYU2 1555 aa20.09■□□□□ 0.81
HNRNPC-205ENST00000553300 LMTK2Q8IWU2 1503 aa20.09■□□□□ 0.81
HNRNPC-205ENST00000553300 VWDEQ8N2E2 1590 aa20.09■□□□□ 0.81
HNRNPC-205ENST00000553300 CFAP65Q6ZU64 1925 aaKnown RBP20.08■□□□□ 0.81
HNRNPC-205ENST00000553300 ANKLE2Q86XL3 938 aa20.08■□□□□ 0.8
HNRNPC-205ENST00000553300 ITGAEP38570 1179 aa20.04■□□□□ 0.8
HNRNPC-205ENST00000553300 RRBP1Q9P2E9 1410 aaKnown RBP20.04■□□□□ 0.8
HNRNPC-205ENST00000553300 POLR1AO95602 1720 aaPredicted RBP20.02■□□□□ 0.8
HNRNPC-205ENST00000553300 EFCAB6Q5THR3 1501 aa20■□□□□ 0.79
HNRNPC-205ENST00000553300 LTBP4Q8N2S1 1624 aa20■□□□□ 0.79
HNRNPC-205ENST00000553300 RPRD2Q5VT52 1461 aaKnown RBP20■□□□□ 0.79
HNRNPC-205ENST00000553300 MED14O60244 1454 aa19.98■□□□□ 0.79
HNRNPC-205ENST00000553300 UNC13BO14795 1591 aa19.97■□□□□ 0.79
HNRNPC-205ENST00000553300 IQSEC2Q5JU85 1478 aa19.97■□□□□ 0.79
HNRNPC-205ENST00000553300 SLC52A1Q9NWF4 448 aa19.97■□□□□ 0.79
HNRNPC-205ENST00000553300 UBR1Q8IWV7 1749 aa19.97■□□□□ 0.79
HNRNPC-205ENST00000553300 NEURL4Q96JN8 1562 aa19.97■□□□□ 0.79
HNRNPC-205ENST00000553300 STAG3Q9UJ98 1225 aa19.96■□□□□ 0.79
HNRNPC-205ENST00000553300 NOS1P29475 1434 aa19.96■□□□□ 0.79
HNRNPC-205ENST00000553300 ZNF335Q9H4Z2 1342 aaPredicted RBP19.96■□□□□ 0.79
HNRNPC-205ENST00000553300 TET3O43151 1660 aa19.95■□□□□ 0.78
HNRNPC-205ENST00000553300 IDI1Q13907 227 aa19.95■□□□□ 0.78
HNRNPC-205ENST00000553300 NPHP4O75161 1426 aaPredicted RBP19.95■□□□□ 0.78
HNRNPC-205ENST00000553300 KDM5AP29375 1690 aaKnown RBP19.94■□□□□ 0.78
HNRNPC-205ENST00000553300 EID1Q9Y6B2 187 aa19.93■□□□□ 0.78
HNRNPC-205ENST00000553300 GCC2Q8IWJ2 1684 aa19.93■□□□□ 0.78
HNRNPC-205ENST00000553300 SLIT1O75093 1534 aa19.92■□□□□ 0.78
HNRNPC-205ENST00000553300 NUP155O75694 1391 aa19.92■□□□□ 0.78
HNRNPC-205ENST00000553300 ARHGAP23Q9P227 1491 aa19.92■□□□□ 0.78
HNRNPC-205ENST00000553300 PIK3C2BO00750 1634 aa19.91■□□□□ 0.78
HNRNPC-205ENST00000553300 TXNDC2Q86VQ3 553 aa19.91■□□□□ 0.78
HNRNPC-205ENST00000553300 SYNMO15061 1565 aa19.91■□□□□ 0.78
HNRNPC-205ENST00000553300 IQGAP3Q86VI3 1631 aa19.91■□□□□ 0.78
HNRNPC-205ENST00000553300 SCAF11Q99590 1463 aaKnown RBP19.9■□□□□ 0.78
HNRNPC-205ENST00000553300 IQGAP1P46940 1657 aa19.9■□□□□ 0.78
HNRNPC-205ENST00000553300 TMEM2Q9UHN6 1383 aa19.9■□□□□ 0.78
HNRNPC-205ENST00000553300 LTKP29376 864 aa19.87■□□□□ 0.77
HNRNPC-205ENST00000553300 CPS1P31327 1500 aa19.87■□□□□ 0.77
HNRNPC-205ENST00000553300 NAIPQ13075 1403 aa19.85■□□□□ 0.77
HNRNPC-205ENST00000553300 ADGRB3O60242 1522 aa19.85■□□□□ 0.77
HNRNPC-205ENST00000553300 HDGFP51858 240 aaKnown RBP19.84■□□□□ 0.77
HNRNPC-205ENST00000553300 E9PCH4 1651 aa19.84■□□□□ 0.77
HNRNPC-205ENST00000553300 HFM1A2PYH4 1435 aa19.82■□□□□ 0.76
HNRNPC-205ENST00000553300 UBAP1LF5GYI3 381 aa19.78■□□□□ 0.76
HNRNPC-205ENST00000553300 TMEM131LA2VDJ0 1609 aa19.77■□□□□ 0.76
HNRNPC-205ENST00000553300 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.76■□□□□ 0.75
HNRNPC-205ENST00000553300 TOM1O60784 492 aa19.75■□□□□ 0.75
HNRNPC-205ENST00000553300 CHGAP10645 457 aaKnown RBP19.75■□□□□ 0.75
HNRNPC-205ENST00000553300 ZFYVE9O95405 1425 aa19.74■□□□□ 0.75
HNRNPC-205ENST00000553300 PPP1R15AO75807 674 aaPredicted RBP19.73■□□□□ 0.75
HNRNPC-205ENST00000553300 TRIM52Q96A61 297 aa19.73■□□□□ 0.75
HNRNPC-205ENST00000553300 RIMS2Q9UQ26 1411 aa19.73■□□□□ 0.75
HNRNPC-205ENST00000553300 ACIN1Q9UKV3 1341 aaKnown RBP19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms