RNA–Protein interactions for RNA: ENST00000552739.5

LETMD1-235, Transcript of LETM1 domain containing 1, humanhuman

TSL 2 BASIC

Gene LETMD1, Length 1,713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-235ENST00000552739 PLPPR3Q6T4P5 718 aa21.52■■□□□ 1.04
LETMD1-235ENST00000552739 MROH1Q8NDA8 1641 aa21.52■■□□□ 1.04
LETMD1-235ENST00000552739 KIF15Q9NS87 1388 aa21.52■■□□□ 1.04
LETMD1-235ENST00000552739 GGT6Q6P531 493 aa21.52■■□□□ 1.03
LETMD1-235ENST00000552739 ZC3H13Q5T200 1668 aaKnown RBP21.51■■□□□ 1.03
LETMD1-235ENST00000552739 CEBPAP49715 358 aaPredicted RBP21.51■■□□□ 1.03
LETMD1-235ENST00000552739 FAM50AQ14320 339 aaKnown RBP21.51■■□□□ 1.03
LETMD1-235ENST00000552739 ERBINQ96RT1 1412 aa21.51■■□□□ 1.03
LETMD1-235ENST00000552739 KIF3BO15066 747 aa21.5■■□□□ 1.03
LETMD1-235ENST00000552739 PPP6R1Q9UPN7 881 aa21.5■■□□□ 1.03
LETMD1-235ENST00000552739 DEPDC5O75140 1603 aa21.49■■□□□ 1.03
LETMD1-235ENST00000552739 SETD1BQ9UPS6 1966 aaKnown RBP21.48■■□□□ 1.03
LETMD1-235ENST00000552739 ANKRD30AQ9BXX3 1397 aa21.48■■□□□ 1.03
LETMD1-235ENST00000552739 NCOA1Q15788 1441 aa21.47■■□□□ 1.03
LETMD1-235ENST00000552739 ZMYM3Q14202 1370 aa21.47■■□□□ 1.03
LETMD1-235ENST00000552739 PRDM15P57071 1507 aaPredicted RBP21.47■■□□□ 1.03
LETMD1-235ENST00000552739 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.47■■□□□ 1.03
LETMD1-235ENST00000552739 NPATQ14207 1427 aa21.46■■□□□ 1.03
LETMD1-235ENST00000552739 CEP152O94986 1710 aa21.45■■□□□ 1.02
LETMD1-235ENST00000552739 PELP1Q8IZL8 1130 aaKnown RBP21.44■■□□□ 1.02
LETMD1-235ENST00000552739 RRBP1Q9P2E9 1410 aaKnown RBP21.44■■□□□ 1.02
LETMD1-235ENST00000552739 ABCC3O15438 1527 aa21.44■■□□□ 1.02
LETMD1-235ENST00000552739 RRP7BPQ9NSQ0 103 aa21.43■■□□□ 1.02
LETMD1-235ENST00000552739 CHIC2Q9UKJ5 165 aa21.43■■□□□ 1.02
LETMD1-235ENST00000552739 PTPRKQ15262 1439 aa21.43■■□□□ 1.02
LETMD1-235ENST00000552739 MYO3AQ8NEV4 1616 aa21.43■■□□□ 1.02
LETMD1-235ENST00000552739 UHRF1BP1Q6BDS2 1440 aa21.42■■□□□ 1.02
LETMD1-235ENST00000552739 ZNF142P52746 1687 aaPredicted RBP21.41■■□□□ 1.02
LETMD1-235ENST00000552739 CAMSAP1Q5T5Y3 1602 aa21.41■■□□□ 1.02
LETMD1-235ENST00000552739 PZPP20742 1482 aa21.4■■□□□ 1.02
LETMD1-235ENST00000552739 WASHC2CQ9Y4E1 1318 aa21.38■■□□□ 1.01
LETMD1-235ENST00000552739 ROCK1Q13464 1354 aa21.38■■□□□ 1.01
LETMD1-235ENST00000552739 SCAF1Q9H7N4 1312 aaKnown RBP21.37■■□□□ 1.01
LETMD1-235ENST00000552739 DIEXFQ68CQ4 756 aaKnown RBP21.36■■□□□ 1.01
LETMD1-235ENST00000552739 VWDEQ8N2E2 1590 aa21.36■■□□□ 1.01
LETMD1-235ENST00000552739 ANKRD50Q9ULJ7 1429 aa21.34■■□□□ 1.01
LETMD1-235ENST00000552739 HSPA2P54652 639 aa21.34■■□□□ 1.01
LETMD1-235ENST00000552739 CEP170BQ9Y4F5 1589 aaPredicted RBP21.34■■□□□ 1.01
LETMD1-235ENST00000552739 UNC13BO14795 1591 aa21.33■■□□□ 1.01
LETMD1-235ENST00000552739 LMTK2Q8IWU2 1503 aa21.32■■□□□ 1
LETMD1-235ENST00000552739 SPATA31D1Q6ZQQ2 1576 aa21.31■■□□□ 1
LETMD1-235ENST00000552739 STRCQ7RTU9 1775 aa21.31■■□□□ 1
LETMD1-235ENST00000552739 CLSPNQ9HAW4 1339 aa21.29■■□□□ 1
LETMD1-235ENST00000552739 ACIN1Q9UKV3 1341 aaKnown RBP21.29■■□□□ 1
LETMD1-235ENST00000552739 KANK1Q14678 1352 aa21.29■■□□□ 1
LETMD1-235ENST00000552739 GCC2Q8IWJ2 1684 aa21.28■■□□□ 1
LETMD1-235ENST00000552739 ZNF316A6NFI3 1004 aaPredicted RBP21.28■■□□□ 1
LETMD1-235ENST00000552739 ITGAEP38570 1179 aa21.28■■□□□ 1
LETMD1-235ENST00000552739 ERVK-7P63135 1459 aa21.28■■□□□ 1
LETMD1-235ENST00000552739 ARHGAP31Q2M1Z3 1444 aa21.27■■□□□ 1
LETMD1-235ENST00000552739 TNRQ92752 1358 aa21.27■■□□□ 1
LETMD1-235ENST00000552739 EFCAB6Q5THR3 1501 aa21.27■■□□□ 1
LETMD1-235ENST00000552739 FBXO31Q5XUX0 539 aaPredicted RBP21.26■□□□□ 0.99
LETMD1-235ENST00000552739 A2ML1A8K2U0 1454 aa21.26■□□□□ 0.99
LETMD1-235ENST00000552739 CENPBP07199 599 aaPredicted RBP21.25■□□□□ 0.99
LETMD1-235ENST00000552739 CFAP65Q6ZU64 1925 aaKnown RBP21.25■□□□□ 0.99
LETMD1-235ENST00000552739 TET3O43151 1660 aa21.24■□□□□ 0.99
LETMD1-235ENST00000552739 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.24■□□□□ 0.993e-14■□□□□ 10.9
LETMD1-235ENST00000552739 NLRP1Q9C000 1473 aa21.24■□□□□ 0.99
LETMD1-235ENST00000552739 IQGAP3Q86VI3 1631 aa21.23■□□□□ 0.99
LETMD1-235ENST00000552739 PLA2R1Q13018 1463 aa21.21■□□□□ 0.99
LETMD1-235ENST00000552739 POLR1AO95602 1720 aaPredicted RBP21.19■□□□□ 0.98
LETMD1-235ENST00000552739 NAIPQ13075 1403 aa21.18■□□□□ 0.98
LETMD1-235ENST00000552739 UBR1Q8IWV7 1749 aa21.17■□□□□ 0.98
LETMD1-235ENST00000552739 UGGT1Q9NYU2 1555 aa21.17■□□□□ 0.98
LETMD1-235ENST00000552739 RPRD2Q5VT52 1461 aaKnown RBP21.17■□□□□ 0.98
LETMD1-235ENST00000552739 SYNMO15061 1565 aa21.16■□□□□ 0.98
LETMD1-235ENST00000552739 E9PCH4 1651 aa21.16■□□□□ 0.98
LETMD1-235ENST00000552739 HFM1A2PYH4 1435 aa21.16■□□□□ 0.98
LETMD1-235ENST00000552739 PIK3C2BO00750 1634 aa21.13■□□□□ 0.97
LETMD1-235ENST00000552739 KDM5AP29375 1690 aaKnown RBP21.13■□□□□ 0.97
LETMD1-235ENST00000552739 PTPRTO14522 1441 aa21.13■□□□□ 0.97
LETMD1-235ENST00000552739 NOS1P29475 1434 aa21.12■□□□□ 0.97
LETMD1-235ENST00000552739 NEUROD1Q13562 356 aa21.11■□□□□ 0.97
LETMD1-235ENST00000552739 NEURL4Q96JN8 1562 aa21.1■□□□□ 0.97
LETMD1-235ENST00000552739 DMRT2Q9Y5R5 561 aa21.09■□□□□ 0.97
LETMD1-235ENST00000552739 NUP155O75694 1391 aa21.09■□□□□ 0.97
LETMD1-235ENST00000552739 PKD2Q13563 968 aa21.07■□□□□ 0.96
LETMD1-235ENST00000552739 ADGRB3O60242 1522 aa21.05■□□□□ 0.96
LETMD1-235ENST00000552739 NCKAP5LQ9HCH0 1330 aa21.05■□□□□ 0.96
LETMD1-235ENST00000552739 THEMISQ8N1K5 641 aaPredicted RBP21.05■□□□□ 0.96
LETMD1-235ENST00000552739 SPHKAPQ2M3C7 1700 aa21.04■□□□□ 0.96
LETMD1-235ENST00000552739 SLIT1O75093 1534 aa21.04■□□□□ 0.96
LETMD1-235ENST00000552739 DHX57Q6P158 1386 aaKnown RBP21.03■□□□□ 0.96
LETMD1-235ENST00000552739 ARHGAP23Q9P227 1491 aa21.03■□□□□ 0.96
LETMD1-235ENST00000552739 MYO5BQ9ULV0 1848 aa21.02■□□□□ 0.95
LETMD1-235ENST00000552739 IQGAP1P46940 1657 aa21.01■□□□□ 0.95
LETMD1-235ENST00000552739 MED14O60244 1454 aa21.01■□□□□ 0.95
LETMD1-235ENST00000552739 TMEM131LA2VDJ0 1609 aa20.99■□□□□ 0.95
LETMD1-235ENST00000552739 IDI1Q13907 227 aa20.98■□□□□ 0.95
LETMD1-235ENST00000552739 LTBP4Q8N2S1 1624 aa20.97■□□□□ 0.95
LETMD1-235ENST00000552739 ANKLE2Q86XL3 938 aa20.97■□□□□ 0.95
LETMD1-235ENST00000552739 SLC52A1Q9NWF4 448 aa20.97■□□□□ 0.95
LETMD1-235ENST00000552739 SCAF11Q99590 1463 aaKnown RBP20.96■□□□□ 0.95
LETMD1-235ENST00000552739 NPHP4O75161 1426 aaPredicted RBP20.96■□□□□ 0.95
LETMD1-235ENST00000552739 TMEM2Q9UHN6 1383 aa20.95■□□□□ 0.94
LETMD1-235ENST00000552739 TRPM2O94759 1503 aa20.94■□□□□ 0.94
LETMD1-235ENST00000552739 CLTCL1P53675 1640 aa20.91■□□□□ 0.94
LETMD1-235ENST00000552739 STAG3Q9UJ98 1225 aa20.91■□□□□ 0.94
LETMD1-235ENST00000552739 SETD5Q9C0A6 1442 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms