RNA–Protein interactions for RNA: ENST00000552578.1

C12orf42-215, Transcript of chromosome 12 open reading frame 42, humanhuman

APPRIS ALT2 TSL 3

Gene C12orf42, Length 831 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf42-215ENST00000552578 ADGBQ8N7X0 1667 aa29.19■■■□□ 2.26
C12orf42-215ENST00000552578 DHX29Q7Z478 1369 aaKnown RBP29.19■■■□□ 2.26
C12orf42-215ENST00000552578 TNRQ92752 1358 aa29.19■■■□□ 2.26
C12orf42-215ENST00000552578 RTEL1-TNFRSF6BF6WH68 1400 aa29.19■■■□□ 2.26
C12orf42-215ENST00000552578 ALKQ9UM73 1620 aa29.17■■■□□ 2.26
C12orf42-215ENST00000552578 THEMISQ8N1K5 641 aaPredicted RBP29.17■■■□□ 2.26
C12orf42-215ENST00000552578 PHF23Q9BUL5 403 aaPredicted RBP29.17■■■□□ 2.26
C12orf42-215ENST00000552578 MBD5Q9P267 1494 aa29.15■■■□□ 2.26
C12orf42-215ENST00000552578 ZNF644Q9H582 1327 aaPredicted RBP29.15■■■□□ 2.26
C12orf42-215ENST00000552578 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.13■■■□□ 2.25
C12orf42-215ENST00000552578 CHIC1Q5VXU3 224 aa29.12■■■□□ 2.25
C12orf42-215ENST00000552578 VWDEQ8N2E2 1590 aa29.12■■■□□ 2.25
C12orf42-215ENST00000552578 PZPP20742 1482 aa29.11■■■□□ 2.25
C12orf42-215ENST00000552578 KIF3BO15066 747 aa29.11■■■□□ 2.25
C12orf42-215ENST00000552578 MED14O60244 1454 aa29.1■■■□□ 2.25
C12orf42-215ENST00000552578 MTUS2Q5JR59 1369 aa29.09■■■□□ 2.25
C12orf42-215ENST00000552578 MIA2Q96PC5 1412 aa29.09■■■□□ 2.25
C12orf42-215ENST00000552578 FAM135AQ9P2D6 1515 aa29.08■■■□□ 2.25
C12orf42-215ENST00000552578 NPHP4O75161 1426 aaPredicted RBP29.07■■■□□ 2.24
C12orf42-215ENST00000552578 WASHC2CQ9Y4E1 1318 aa29.07■■■□□ 2.24
C12orf42-215ENST00000552578 NLRP1Q9C000 1473 aa29.05■■■□□ 2.24
C12orf42-215ENST00000552578 KDM5DQ9BY66 1539 aa29.04■■■□□ 2.24
C12orf42-215ENST00000552578 DEPDC5O75140 1603 aa29.03■■■□□ 2.24
C12orf42-215ENST00000552578 UGGT1Q9NYU2 1555 aa29.01■■■□□ 2.24
C12orf42-215ENST00000552578 RSPH4AQ5TD94 716 aa29.01■■■□□ 2.23
C12orf42-215ENST00000552578 STRCP1A6NGW2 1772 aa29.01■■■□□ 2.23
C12orf42-215ENST00000552578 TIAM1Q13009 1591 aa29.01■■■□□ 2.23
C12orf42-215ENST00000552578 LRRC7Q96NW7 1537 aa28.97■■■□□ 2.23
C12orf42-215ENST00000552578 SENP3Q9H4L4 574 aaPredicted RBP28.94■■■□□ 2.22
C12orf42-215ENST00000552578 IQGAP1P46940 1657 aa28.93■■■□□ 2.22
C12orf42-215ENST00000552578 RGS17Q9UGC6 210 aaPredicted RBP28.93■■■□□ 2.22
C12orf42-215ENST00000552578 CEP162Q5TB80 1403 aa28.93■■■□□ 2.22
C12orf42-215ENST00000552578 CCDC141Q6ZP82 1450 aa28.92■■■□□ 2.22
C12orf42-215ENST00000552578 EHBP1L1Q8N3D4 1523 aa28.89■■■□□ 2.21
C12orf42-215ENST00000552578 RNF17Q9BXT8 1623 aaKnown RBP28.88■■■□□ 2.21
C12orf42-215ENST00000552578 SYNMO15061 1565 aa28.84■■■□□ 2.21
C12orf42-215ENST00000552578 TSPY4P0CV99 314 aa28.84■■■□□ 2.21
C12orf42-215ENST00000552578 TSPY10P0CW01 314 aa28.84■■■□□ 2.21
C12orf42-215ENST00000552578 ZC3H13Q5T200 1668 aaKnown RBP28.81■■■□□ 2.2
C12orf42-215ENST00000552578 CAMSAP2Q08AD1 1489 aa28.81■■■□□ 2.2
C12orf42-215ENST00000552578 ABCC3O15438 1527 aa28.76■■■□□ 2.19
C12orf42-215ENST00000552578 ERVK-7P63135 1459 aa28.76■■■□□ 2.19
C12orf42-215ENST00000552578 XIRP1Q702N8 1843 aaKnown RBP28.76■■■□□ 2.19
C12orf42-215ENST00000552578 ARHGEF5Q12774 1597 aa28.75■■■□□ 2.19
C12orf42-215ENST00000552578 NCOA2Q15596 1464 aa28.74■■■□□ 2.19
C12orf42-215ENST00000552578 LTKP29376 864 aa28.74■■■□□ 2.19
C12orf42-215ENST00000552578 FAM135BQ49AJ0 1406 aa28.74■■■□□ 2.19
C12orf42-215ENST00000552578 SCAF11Q99590 1463 aaKnown RBP28.73■■■□□ 2.19
C12orf42-215ENST00000552578 TXNDC2Q86VQ3 553 aa28.73■■■□□ 2.19
C12orf42-215ENST00000552578 POTEAQ6S8J7 498 aa28.72■■■□□ 2.19
C12orf42-215ENST00000552578 UBR1Q8IWV7 1749 aa28.71■■■□□ 2.19
C12orf42-215ENST00000552578 ARHGAP23Q9P227 1491 aa28.7■■■□□ 2.18
C12orf42-215ENST00000552578 CFAP65Q6ZU64 1925 aaKnown RBP28.68■■■□□ 2.18
C12orf42-215ENST00000552578 SLIT1O75093 1534 aa28.68■■■□□ 2.18
C12orf42-215ENST00000552578 MROH1Q8NDA8 1641 aa28.66■■■□□ 2.18
C12orf42-215ENST00000552578 EID1Q9Y6B2 187 aa28.66■■■□□ 2.18
C12orf42-215ENST00000552578 CEP152O94986 1710 aa28.63■■■□□ 2.17
C12orf42-215ENST00000552578 MAST1Q9Y2H9 1570 aa28.62■■■□□ 2.17
C12orf42-215ENST00000552578 EIF2AK4Q9P2K8 1649 aaKnown RBP28.61■■■□□ 2.17
C12orf42-215ENST00000552578 ARHGAP31Q2M1Z3 1444 aa28.6■■■□□ 2.17
C12orf42-215ENST00000552578 KCNA6P17658 529 aa28.57■■■□□ 2.16
C12orf42-215ENST00000552578 TMEM94Q12767 1356 aa28.57■■■□□ 2.16
C12orf42-215ENST00000552578 TMEM2Q9UHN6 1383 aa28.55■■■□□ 2.16
C12orf42-215ENST00000552578 SETD1AO15047 1707 aaKnown RBP28.53■■■□□ 2.16
C12orf42-215ENST00000552578 PROSER2Q86WR7 435 aaPredicted RBP28.51■■■□□ 2.15
C12orf42-215ENST00000552578 ROBO1Q9Y6N7 1651 aa28.51■■■□□ 2.15
C12orf42-215ENST00000552578 DUOX2Q9NRD8 1548 aa28.5■■■□□ 2.15
C12orf42-215ENST00000552578 STAG3Q9UJ98 1225 aa28.49■■■□□ 2.15
C12orf42-215ENST00000552578 MAP3K1Q13233 1512 aa28.47■■■□□ 2.15
C12orf42-215ENST00000552578 PIK3C2BO00750 1634 aa28.47■■■□□ 2.15
C12orf42-215ENST00000552578 LRRC9Q6ZRR7 1453 aa28.45■■■□□ 2.14
C12orf42-215ENST00000552578 IDI1Q13907 227 aa28.44■■■□□ 2.14
C12orf42-215ENST00000552578 SLC26A8Q96RN1 970 aa28.44■■■□□ 2.14
C12orf42-215ENST00000552578 PRDM15P57071 1507 aaPredicted RBP28.43■■■□□ 2.14
C12orf42-215ENST00000552578 TET3O43151 1660 aa28.43■■■□□ 2.14
C12orf42-215ENST00000552578 RBM33Q96EV2 1170 aaKnown RBP28.43■■■□□ 2.14
C12orf42-215ENST00000552578 MYOM3Q5VTT5 1437 aa28.43■■■□□ 2.14
C12orf42-215ENST00000552578 SLAIN2Q9P270 581 aa28.42■■■□□ 2.14
C12orf42-215ENST00000552578 JCADQ9P266 1359 aa28.41■■■□□ 2.14
C12orf42-215ENST00000552578 ERBINQ96RT1 1412 aa28.4■■■□□ 2.14
C12orf42-215ENST00000552578 KIF15Q9NS87 1388 aa28.39■■■□□ 2.14
C12orf42-215ENST00000552578 EFCAB6Q5THR3 1501 aa28.39■■■□□ 2.14
C12orf42-215ENST00000552578 KDM5AP29375 1690 aaKnown RBP28.38■■■□□ 2.13
C12orf42-215ENST00000552578 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.38■■■□□ 2.13
C12orf42-215ENST00000552578 NKTRP30414 1462 aaKnown RBP28.38■■■□□ 2.13
C12orf42-215ENST00000552578 MSH6P52701 1360 aa28.37■■■□□ 2.13
C12orf42-215ENST00000552578 RRP7BPQ9NSQ0 103 aa28.37■■■□□ 2.13
C12orf42-215ENST00000552578 KANK1Q14678 1352 aa28.36■■■□□ 2.13
C12orf42-215ENST00000552578 KANK4Q5T7N3 995 aaPredicted RBP28.34■■■□□ 2.13
C12orf42-215ENST00000552578 PHLPP1O60346 1717 aa28.33■■■□□ 2.13
C12orf42-215ENST00000552578 UPF1Q92900 1129 aaKnown RBP eCLIP28.33■■■□□ 2.13
C12orf42-215ENST00000552578 NWD1Q149M9 1564 aa28.32■■■□□ 2.12
C12orf42-215ENST00000552578 LMTK2Q8IWU2 1503 aa28.29■■■□□ 2.12
C12orf42-215ENST00000552578 ABCC5O15440 1437 aa28.29■■■□□ 2.12
C12orf42-215ENST00000552578 SPATA31A6Q5VVP1 1343 aa28.29■■■□□ 2.12
C12orf42-215ENST00000552578 ZNF772Q68DY9 489 aaPredicted RBP28.29■■■□□ 2.12
C12orf42-215ENST00000552578 SLC52A1Q9NWF4 448 aa28.29■■■□□ 2.12
C12orf42-215ENST00000552578 NOS1P29475 1434 aa28.27■■■□□ 2.12
C12orf42-215ENST00000552578 BCANQ96GW7 911 aa28.27■■■□□ 2.12
C12orf42-215ENST00000552578 FGD6Q6ZV73 1430 aa28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms