RNA–Protein interactions for RNA: ENST00000552578.1

C12orf42-215, Transcript of chromosome 12 open reading frame 42, humanhuman

APPRIS ALT2 TSL 3

Gene C12orf42, Length 831 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf42-215ENST00000552578 NISCHQ9Y2I1 1504 aa45.82■■■■■ 4.92
C12orf42-215ENST00000552578 ABCC9O60706 1549 aa42.12■■■■■ 4.33
C12orf42-215ENST00000552578 CCDC180Q9P1Z9 1646 aa41.35■■■■■ 4.21
C12orf42-215ENST00000552578 DNAJC5BQ9UF47 199 aa40.29■■■■■ 4.04
C12orf42-215ENST00000552578 RB1CC1Q8TDY2 1594 aa39.76■■■■□ 3.96
C12orf42-215ENST00000552578 NACADO15069 1562 aa39.35■■■■□ 3.89
C12orf42-215ENST00000552578 PABPN1Q86U42 306 aaKnown RBP eCLIP39.15■■■■□ 3.86
C12orf42-215ENST00000552578 DCAF8L2P0C7V8 631 aa39.01■■■■□ 3.84
C12orf42-215ENST00000552578 UNC13AQ9UPW8 1703 aa38.94■■■■□ 3.82
C12orf42-215ENST00000552578 BICRAQ9NZM4 1560 aa38.69■■■■□ 3.78
C12orf42-215ENST00000552578 MYO15BQ96JP2 1530 aa38.63■■■■□ 3.78
C12orf42-215ENST00000552578 SHROOM4Q9ULL8 1493 aa38.1■■■■□ 3.69
C12orf42-215ENST00000552578 CECR2Q9BXF3 1484 aa38.05■■■■□ 3.68
C12orf42-215ENST00000552578 CC2D2AQ9P2K1 1620 aa38.01■■■■□ 3.68
C12orf42-215ENST00000552578 DCAF1Q9Y4B6 1507 aa37.83■■■■□ 3.65
C12orf42-215ENST00000552578 ZCCHC6Q5VYS8 1495 aaKnown RBP37.77■■■■□ 3.64
C12orf42-215ENST00000552578 EIF4G1Q04637 1599 aaKnown RBP37.74■■■■□ 3.63
C12orf42-215ENST00000552578 SCRIBQ14160 1630 aa37.66■■■■□ 3.62
C12orf42-215ENST00000552578 DNAJC5Q9H3Z4 198 aa37.59■■■■□ 3.61
C12orf42-215ENST00000552578 CUX2O14529 1486 aa36.66■■■■□ 3.46
C12orf42-215ENST00000552578 NCAPD3P42695 1498 aa36.41■■■■□ 3.42
C12orf42-215ENST00000552578 ERCC6Q03468 1493 aa36.41■■■■□ 3.42
C12orf42-215ENST00000552578 ATAD2BQ9ULI0 1458 aa36.14■■■■□ 3.38
C12orf42-215ENST00000552578 NESP48681 1621 aa36.01■■■■□ 3.35
C12orf42-215ENST00000552578 HMGXB3Q12766 1538 aa35.98■■■■□ 3.35
C12orf42-215ENST00000552578 SMARCA2P51531 1590 aa35.97■■■■□ 3.35
C12orf42-215ENST00000552578 SMARCA4P51532 1647 aa35.84■■■■□ 3.33
C12orf42-215ENST00000552578 THOC2Q8NI27 1593 aaKnown RBP35.79■■■■□ 3.32
C12orf42-215ENST00000552578 BAZ1BQ9UIG0 1483 aaKnown RBP35.7■■■■□ 3.31
C12orf42-215ENST00000552578 LAMC3Q9Y6N6 1575 aa35.61■■■■□ 3.29
C12orf42-215ENST00000552578 BAZ1AQ9NRL2 1556 aaPredicted RBP35.59■■■■□ 3.29
C12orf42-215ENST00000552578 PEG3Q9GZU2 1588 aa35.55■■■■□ 3.28
C12orf42-215ENST00000552578 KIF21AQ7Z4S6 1674 aa35.52■■■■□ 3.28
C12orf42-215ENST00000552578 TRIM41Q8WV44 630 aa35.51■■■■□ 3.28
C12orf42-215ENST00000552578 PDS5BQ9NTI5 1447 aa35.49■■■■□ 3.27
C12orf42-215ENST00000552578 MROH2BQ7Z745 1585 aa35.26■■■■□ 3.24
C12orf42-215ENST00000552578 CADPSQ9ULU8 1353 aa35.25■■■■□ 3.23
C12orf42-215ENST00000552578 MRC2Q9UBG0 1479 aa35.18■■■■□ 3.22
C12orf42-215ENST00000552578 WDR62O43379 1518 aa35.11■■■■□ 3.21
C12orf42-215ENST00000552578 OSCARQ8IYS5 282 aa34.95■■■■□ 3.19
C12orf42-215ENST00000552578 CEP164Q9UPV0 1460 aa34.87■■■■□ 3.17
C12orf42-215ENST00000552578 WIZO95785 1651 aa34.81■■■■□ 3.16
C12orf42-215ENST00000552578 FANCD2Q9BXW9 1451 aa34.79■■■■□ 3.16
C12orf42-215ENST00000552578 CFTRP13569 1480 aa34.68■■■■□ 3.14
C12orf42-215ENST00000552578 URB2Q14146 1524 aaKnown RBP34.54■■■■□ 3.12
C12orf42-215ENST00000552578 RIMBP3CA6NJZ7 1639 aa34.47■■■■□ 3.11
C12orf42-215ENST00000552578 RIMBP3BA6NNM3 1639 aa34.47■■■■□ 3.11
C12orf42-215ENST00000552578 RIMBP3Q9UFD9 1639 aa34.47■■■■□ 3.11
C12orf42-215ENST00000552578 RSF1Q96T23 1441 aaPredicted RBP34.31■■■■□ 3.08
C12orf42-215ENST00000552578 TOP2AP11388 1531 aaKnown RBP34.29■■■■□ 3.08
C12orf42-215ENST00000552578 ARHGEF11O15085 1522 aa34.25■■■■□ 3.07
C12orf42-215ENST00000552578 IFT140Q96RY7 1462 aa34.25■■■■□ 3.07
C12orf42-215ENST00000552578 ZNF608Q9ULD9 1512 aaPredicted RBP34.25■■■■□ 3.07
C12orf42-215ENST00000552578 PRDM2Q13029 1718 aa34.18■■■■□ 3.06
C12orf42-215ENST00000552578 CYB5RLQ6IPT4 315 aa34.13■■■■□ 3.05
C12orf42-215ENST00000552578 TOPBP1Q92547 1522 aa34.04■■■■□ 3.04
C12orf42-215ENST00000552578 EIF4G3O43432 1585 aaKnown RBP34■■■■□ 3.03
C12orf42-215ENST00000552578 ABCC8Q09428 1581 aa33.98■■■■□ 3.03
C12orf42-215ENST00000552578 CCDC88BA6NC98 1476 aa33.97■■■■□ 3.03
C12orf42-215ENST00000552578 TRHP20396 242 aaPredicted RBP33.97■■■■□ 3.03
C12orf42-215ENST00000552578 CHD1O14646 1710 aa33.92■■■■□ 3.02
C12orf42-215ENST00000552578 ARAP1Q96P48 1450 aa33.9■■■■□ 3.02
C12orf42-215ENST00000552578 AQRO60306 1485 aaKnown RBP eCLIP33.86■■■■□ 3.01
C12orf42-215ENST00000552578 DNMBPQ6XZF7 1577 aa33.82■■■■□ 3
C12orf42-215ENST00000552578 TARBP1Q13395 1621 aaKnown RBP33.79■■■■□ 3
C12orf42-215ENST00000552578 FBLN2P98095 1184 aa33.79■■■■□ 3
C12orf42-215ENST00000552578 POLA1P09884 1462 aaPredicted RBP33.64■■■□□ 2.98
C12orf42-215ENST00000552578 TDRD9Q8NDG6 1382 aaKnown RBP33.55■■■□□ 2.96
C12orf42-215ENST00000552578 AEBP2Q6ZN18 517 aaPredicted RBP33.54■■■□□ 2.96
C12orf42-215ENST00000552578 SOGA1O94964 1423 aa33.53■■■□□ 2.96
C12orf42-215ENST00000552578 RAD54L2Q9Y4B4 1467 aa33.53■■■□□ 2.96
C12orf42-215ENST00000552578 CLASP1Q7Z460 1538 aa33.49■■■□□ 2.95
C12orf42-215ENST00000552578 CHMP7Q8WUX9 453 aaPredicted RBP33.47■■■□□ 2.95
C12orf42-215ENST00000552578 SNAPC4Q5SXM2 1469 aa33.44■■■□□ 2.94
C12orf42-215ENST00000552578 WDR97A6NE52 1622 aa33.4■■■□□ 2.94
C12orf42-215ENST00000552578 SYNJ1O43426 1573 aa33.38■■■□□ 2.93
C12orf42-215ENST00000552578 MAGI1Q96QZ7 1491 aaPredicted RBP33.37■■■□□ 2.93
C12orf42-215ENST00000552578 FGD5Q6ZNL6 1462 aa33.31■■■□□ 2.92
C12orf42-215ENST00000552578 GRIN2BQ13224 1484 aa33.3■■■□□ 2.92
C12orf42-215ENST00000552578 SYNJ2O15056 1496 aa33.27■■■□□ 2.92
C12orf42-215ENST00000552578 GAPVD1Q14C86 1478 aa33.2■■■□□ 2.91
C12orf42-215ENST00000552578 CUX1P39880 1505 aa33.17■■■□□ 2.9
C12orf42-215ENST00000552578 PBRM1Q86U86 1689 aa33.07■■■□□ 2.89
C12orf42-215ENST00000552578 ERCC6L2Q5T890 1561 aa32.98■■■□□ 2.87
C12orf42-215ENST00000552578 ABCA10Q8WWZ4 1543 aa32.93■■■□□ 2.86
C12orf42-215ENST00000552578 ABCA5Q8WWZ7 1642 aa32.91■■■□□ 2.86
C12orf42-215ENST00000552578 GRIN2AQ12879 1464 aa32.85■■■□□ 2.85
C12orf42-215ENST00000552578 NUP160Q12769 1436 aa32.8■■■□□ 2.84
C12orf42-215ENST00000552578 CEP170Q5SW79 1584 aa32.79■■■□□ 2.84
C12orf42-215ENST00000552578 KIF13AQ9H1H9 1805 aa32.72■■■□□ 2.83
C12orf42-215ENST00000552578 ADAMTS12P58397 1594 aa32.7■■■□□ 2.83
C12orf42-215ENST00000552578 SHROOM2Q13796 1616 aa32.69■■■□□ 2.82
C12orf42-215ENST00000552578 WRNQ14191 1432 aaPredicted RBP eCLIP32.68■■■□□ 2.82
C12orf42-215ENST00000552578 FHAD1B1AJZ9 1412 aa32.65■■■□□ 2.82
C12orf42-215ENST00000552578 PRG4Q92954 1404 aaPredicted RBP32.54■■■□□ 2.8
C12orf42-215ENST00000552578 JPH4Q96JJ6 628 aa32.54■■■□□ 2.8
C12orf42-215ENST00000552578 FAM69CQ0P6D2 419 aa32.5■■■□□ 2.79
C12orf42-215ENST00000552578 ERICH3Q5RHP9 1530 aa32.49■■■□□ 2.79
C12orf42-215ENST00000552578 ABCC10Q5T3U5 1492 aa32.47■■■□□ 2.79
C12orf42-215ENST00000552578 NPM1P06748 294 aaKnown RBP eCLIP32.44■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms