RNA–Protein interactions for RNA: ENST00000552127.5

BRF1-220, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-220ENST00000552127 ANKLE2Q86XL3 938 aa24.84■■□□□ 1.57
BRF1-220ENST00000552127 TNRQ92752 1358 aa24.82■■□□□ 1.56
BRF1-220ENST00000552127 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.82■■□□□ 1.565e-7■■■■■ 29.7
BRF1-220ENST00000552127 FBXO31Q5XUX0 539 aaPredicted RBP24.82■■□□□ 1.56
BRF1-220ENST00000552127 ADGBQ8N7X0 1667 aa24.81■■□□□ 1.56
BRF1-220ENST00000552127 GPATCH8Q9UKJ3 1502 aaKnown RBP24.81■■□□□ 1.56
BRF1-220ENST00000552127 STRCP1A6NGW2 1772 aa24.8■■□□□ 1.56
BRF1-220ENST00000552127 NPHP4O75161 1426 aaPredicted RBP24.8■■□□□ 1.56
BRF1-220ENST00000552127 RNF17Q9BXT8 1623 aaKnown RBP24.8■■□□□ 1.56
BRF1-220ENST00000552127 KIAA1107Q9UPP5 1409 aa24.79■■□□□ 1.56
BRF1-220ENST00000552127 MED14O60244 1454 aa24.79■■□□□ 1.56
BRF1-220ENST00000552127 LRRC7Q96NW7 1537 aa24.79■■□□□ 1.56
BRF1-220ENST00000552127 DEPDC5O75140 1603 aa24.78■■□□□ 1.56
BRF1-220ENST00000552127 IQGAP1P46940 1657 aa24.76■■□□□ 1.55
BRF1-220ENST00000552127 THEMISQ8N1K5 641 aaPredicted RBP24.76■■□□□ 1.55
BRF1-220ENST00000552127 PLEKHH2Q8IVE3 1493 aa24.76■■□□□ 1.55
BRF1-220ENST00000552127 POTEAQ6S8J7 498 aa24.74■■□□□ 1.55
BRF1-220ENST00000552127 PZPP20742 1482 aa24.74■■□□□ 1.55
BRF1-220ENST00000552127 SYNMO15061 1565 aa24.73■■□□□ 1.55
BRF1-220ENST00000552127 UGGT1Q9NYU2 1555 aa24.72■■□□□ 1.55
BRF1-220ENST00000552127 CFDP1Q9UEE9 299 aaPredicted RBP24.71■■□□□ 1.55
BRF1-220ENST00000552127 FAM135AQ9P2D6 1515 aa24.7■■□□□ 1.54
BRF1-220ENST00000552127 NLRP1Q9C000 1473 aa24.69■■□□□ 1.54
BRF1-220ENST00000552127 EHBP1L1Q8N3D4 1523 aa24.68■■□□□ 1.54
BRF1-220ENST00000552127 KDM5DQ9BY66 1539 aa24.68■■□□□ 1.54
BRF1-220ENST00000552127 MIA2Q96PC5 1412 aa24.68■■□□□ 1.54
BRF1-220ENST00000552127 DHX29Q7Z478 1369 aaKnown RBP24.66■■□□□ 1.54
BRF1-220ENST00000552127 SETD1AO15047 1707 aaKnown RBP24.64■■□□□ 1.54
BRF1-220ENST00000552127 LOC105371045A0A1W2PR82 267 aa24.64■■□□□ 1.54
BRF1-220ENST00000552127 KIF3BO15066 747 aa24.63■■□□□ 1.53
BRF1-220ENST00000552127 MTUS2Q5JR59 1369 aa24.63■■□□□ 1.53
BRF1-220ENST00000552127 CCNB3Q8WWL7 1395 aa24.63■■□□□ 1.53
BRF1-220ENST00000552127 WASHC2CQ9Y4E1 1318 aa24.62■■□□□ 1.53
BRF1-220ENST00000552127 RTEL1-TNFRSF6BF6WH68 1400 aa24.61■■□□□ 1.53
BRF1-220ENST00000552127 ZC3H13Q5T200 1668 aaKnown RBP24.6■■□□□ 1.53
BRF1-220ENST00000552127 TIAM1Q13009 1591 aa24.6■■□□□ 1.53
BRF1-220ENST00000552127 XIRP1Q702N8 1843 aaKnown RBP24.6■■□□□ 1.53
BRF1-220ENST00000552127 ZNF644Q9H582 1327 aaPredicted RBP24.6■■□□□ 1.53
BRF1-220ENST00000552127 MBD5Q9P267 1494 aa24.59■■□□□ 1.53
BRF1-220ENST00000552127 VPS8Q8N3P4 1428 aa24.58■■□□□ 1.53
BRF1-220ENST00000552127 FAM135BQ49AJ0 1406 aa24.54■■□□□ 1.52
BRF1-220ENST00000552127 ROBO1Q9Y6N7 1651 aa24.46■■□□□ 1.51
BRF1-220ENST00000552127 NCOA2Q15596 1464 aa24.46■■□□□ 1.51
BRF1-220ENST00000552127 SCAF11Q99590 1463 aaKnown RBP24.46■■□□□ 1.51
BRF1-220ENST00000552127 UBR1Q8IWV7 1749 aa24.46■■□□□ 1.51
BRF1-220ENST00000552127 MAP3K1Q13233 1512 aa24.45■■□□□ 1.5
BRF1-220ENST00000552127 LTKP29376 864 aa24.43■■□□□ 1.5
BRF1-220ENST00000552127 UPF1Q92900 1129 aaKnown RBP eCLIP24.43■■□□□ 1.5
BRF1-220ENST00000552127 LRRC9Q6ZRR7 1453 aa24.43■■□□□ 1.5
BRF1-220ENST00000552127 ERVK-7P63135 1459 aa24.42■■□□□ 1.5
BRF1-220ENST00000552127 CCDC141Q6ZP82 1450 aa24.42■■□□□ 1.5
BRF1-220ENST00000552127 ABCC3O15438 1527 aa24.4■■□□□ 1.5
BRF1-220ENST00000552127 TXNDC2Q86VQ3 553 aa24.39■■□□□ 1.49
BRF1-220ENST00000552127 CFAP65Q6ZU64 1925 aaKnown RBP24.38■■□□□ 1.49
BRF1-220ENST00000552127 TMEM94Q12767 1356 aa24.38■■□□□ 1.49
BRF1-220ENST00000552127 ARHGAP23Q9P227 1491 aa24.38■■□□□ 1.49
BRF1-220ENST00000552127 SLIT1O75093 1534 aa24.37■■□□□ 1.49
BRF1-220ENST00000552127 CAMSAP2Q08AD1 1489 aa24.36■■□□□ 1.49
BRF1-220ENST00000552127 RSPH4AQ5TD94 716 aa24.33■■□□□ 1.49
BRF1-220ENST00000552127 SRCAPQ6ZRS2 3230 aa24.33■■□□□ 1.49
BRF1-220ENST00000552127 PHLPP1O60346 1717 aa24.32■■□□□ 1.48
BRF1-220ENST00000552127 JCADQ9P266 1359 aa24.31■■□□□ 1.48
BRF1-220ENST00000552127 EID1Q9Y6B2 187 aa24.31■■□□□ 1.48
BRF1-220ENST00000552127 ARHGEF5Q12774 1597 aa24.3■■□□□ 1.48
BRF1-220ENST00000552127 TRIM52Q96A61 297 aa24.3■■□□□ 1.48
BRF1-220ENST00000552127 RBM33Q96EV2 1170 aaKnown RBP24.3■■□□□ 1.48
BRF1-220ENST00000552127 CEP152O94986 1710 aa24.29■■□□□ 1.48
BRF1-220ENST00000552127 MROH1Q8NDA8 1641 aa24.26■■□□□ 1.47
BRF1-220ENST00000552127 KCNA6P17658 529 aa24.26■■□□□ 1.47
BRF1-220ENST00000552127 PROSER2Q86WR7 435 aaPredicted RBP24.26■■□□□ 1.47
BRF1-220ENST00000552127 TSPY4P0CV99 314 aa24.25■■□□□ 1.47
BRF1-220ENST00000552127 TSPY10P0CW01 314 aa24.25■■□□□ 1.47
BRF1-220ENST00000552127 KANK4Q5T7N3 995 aaPredicted RBP24.25■■□□□ 1.47
BRF1-220ENST00000552127 LRP6O75581 1613 aa24.24■■□□□ 1.47
BRF1-220ENST00000552127 ZNF772Q68DY9 489 aaPredicted RBP24.24■■□□□ 1.47
BRF1-220ENST00000552127 MYOM3Q5VTT5 1437 aa24.23■■□□□ 1.47
BRF1-220ENST00000552127 PRDM15P57071 1507 aaPredicted RBP24.23■■□□□ 1.47
BRF1-220ENST00000552127 EIF2AK4Q9P2K8 1649 aaKnown RBP24.23■■□□□ 1.47
BRF1-220ENST00000552127 TMEM2Q9UHN6 1383 aa24.22■■□□□ 1.47
BRF1-220ENST00000552127 SLAIN2Q9P270 581 aa24.22■■□□□ 1.47
BRF1-220ENST00000552127 PIK3C2BO00750 1634 aa24.21■■□□□ 1.47
BRF1-220ENST00000552127 COL16A1Q07092 1604 aaPredicted RBP24.21■■□□□ 1.47
BRF1-220ENST00000552127 MEX3CQ5U5Q3 659 aaKnown RBP24.2■■□□□ 1.46
BRF1-220ENST00000552127 MSH6P52701 1360 aa24.19■■□□□ 1.46
BRF1-220ENST00000552127 SLC26A8Q96RN1 970 aa24.19■■□□□ 1.46
BRF1-220ENST00000552127 MAST1Q9Y2H9 1570 aa24.19■■□□□ 1.46
BRF1-220ENST00000552127 TET3O43151 1660 aa24.18■■□□□ 1.46
BRF1-220ENST00000552127 CROCC2H7BZ55 1655 aa24.18■■□□□ 1.46
BRF1-220ENST00000552127 SPATA31A6Q5VVP1 1343 aa24.17■■□□□ 1.46
BRF1-220ENST00000552127 APLP2Q06481 763 aa24.17■■□□□ 1.46
BRF1-220ENST00000552127 NKTRP30414 1462 aaKnown RBP24.17■■□□□ 1.46
BRF1-220ENST00000552127 NWD1Q149M9 1564 aa24.16■■□□□ 1.46
BRF1-220ENST00000552127 RXRBP28702 533 aa24.16■■□□□ 1.46
BRF1-220ENST00000552127 PTPN23Q9H3S7 1636 aa24.15■■□□□ 1.46
BRF1-220ENST00000552127 ARHGAP31Q2M1Z3 1444 aa24.14■■□□□ 1.45
BRF1-220ENST00000552127 STAG3Q9UJ98 1225 aa24.14■■□□□ 1.45
BRF1-220ENST00000552127 FGD6Q6ZV73 1430 aa24.13■■□□□ 1.45
BRF1-220ENST00000552127 EFCAB6Q5THR3 1501 aa24.12■■□□□ 1.45
BRF1-220ENST00000552127 CDK12Q9NYV4 1490 aaPredicted RBP24.11■■□□□ 1.45
BRF1-220ENST00000552127 KDM5AP29375 1690 aaKnown RBP24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms