RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 DISP3Q9P2K9 1392 aa11.06□□□□□ -0.64
PRPF40B-214ENST00000551320 ZNF335Q9H4Z2 1342 aaPredicted RBP11.06□□□□□ -0.64
PRPF40B-214ENST00000551320 MTUS2Q5JR59 1369 aa11.05□□□□□ -0.64
PRPF40B-214ENST00000551320 AGLP35573 1532 aa11.05□□□□□ -0.64
PRPF40B-214ENST00000551320 SPDYE4A6NLX3 237 aa11.05□□□□□ -0.64
PRPF40B-214ENST00000551320 FBXO31Q5XUX0 539 aaPredicted RBP11.05□□□□□ -0.64
PRPF40B-214ENST00000551320 CLTCQ00610 1675 aaKnown RBP11.04□□□□□ -0.64
PRPF40B-214ENST00000551320 REREQ9P2R6 1566 aa11.04□□□□□ -0.64
PRPF40B-214ENST00000551320 CAMSAP1Q5T5Y3 1602 aa11.04□□□□□ -0.64
PRPF40B-214ENST00000551320 ATP7AQ04656 1500 aa11.04□□□□□ -0.64
PRPF40B-214ENST00000551320 SETD1BQ9UPS6 1966 aaKnown RBP11.03□□□□□ -0.64
PRPF40B-214ENST00000551320 NCOA1Q15788 1441 aa11.03□□□□□ -0.64
PRPF40B-214ENST00000551320 LTBP4Q8N2S1 1624 aa11.02□□□□□ -0.64
PRPF40B-214ENST00000551320 A2MP01023 1474 aa11.02□□□□□ -0.65
PRPF40B-214ENST00000551320 TIAM1Q13009 1591 aa11.01□□□□□ -0.65
PRPF40B-214ENST00000551320 INO80Q9ULG1 1556 aaPredicted RBP11□□□□□ -0.65
PRPF40B-214ENST00000551320 PTPRTO14522 1441 aa11□□□□□ -0.65
PRPF40B-214ENST00000551320 PTPRKQ15262 1439 aa11□□□□□ -0.65
PRPF40B-214ENST00000551320 CEP162Q5TB80 1403 aa11□□□□□ -0.65
PRPF40B-214ENST00000551320 KIF3BO15066 747 aa10.99□□□□□ -0.65
PRPF40B-214ENST00000551320 CNTLNQ9NXG0 1405 aa10.99□□□□□ -0.65
PRPF40B-214ENST00000551320 MBD5Q9P267 1494 aa10.99□□□□□ -0.65
PRPF40B-214ENST00000551320 UBAP1LF5GYI3 381 aa10.98□□□□□ -0.65
PRPF40B-214ENST00000551320 KIAA1107Q9UPP5 1409 aa10.98□□□□□ -0.65
PRPF40B-214ENST00000551320 PLXNC1O60486 1568 aa10.98□□□□□ -0.65
PRPF40B-214ENST00000551320 MYO3AQ8NEV4 1616 aa10.97□□□□□ -0.65
PRPF40B-214ENST00000551320 PIP4K2BP78356 416 aa10.96□□□□□ -0.65
PRPF40B-214ENST00000551320 KANK4Q5T7N3 995 aaPredicted RBP10.96□□□□□ -0.65
PRPF40B-214ENST00000551320 NCOA2Q15596 1464 aa10.95□□□□□ -0.66
PRPF40B-214ENST00000551320 NPATQ14207 1427 aa10.95□□□□□ -0.66
PRPF40B-214ENST00000551320 MROH2AA6NES4 1674 aa10.95□□□□□ -0.66
PRPF40B-214ENST00000551320 CEP170BQ9Y4F5 1589 aaPredicted RBP10.94□□□□□ -0.66
PRPF40B-214ENST00000551320 CAMSAP2Q08AD1 1489 aa10.94□□□□□ -0.66
PRPF40B-214ENST00000551320 PLEKHH2Q8IVE3 1493 aa10.94□□□□□ -0.66
PRPF40B-214ENST00000551320 EHBP1L1Q8N3D4 1523 aa10.94□□□□□ -0.66
PRPF40B-214ENST00000551320 DHX29Q7Z478 1369 aaKnown RBP10.93□□□□□ -0.66
PRPF40B-214ENST00000551320 ADGBQ8N7X0 1667 aa10.93□□□□□ -0.66
PRPF40B-214ENST00000551320 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.92□□□□□ -0.66
PRPF40B-214ENST00000551320 WASHC2CQ9Y4E1 1318 aa10.92□□□□□ -0.66
PRPF40B-214ENST00000551320 TNRQ92752 1358 aa10.91□□□□□ -0.66
PRPF40B-214ENST00000551320 SPATA31D1Q6ZQQ2 1576 aa10.91□□□□□ -0.66
PRPF40B-214ENST00000551320 TCOF1Q13428 1488 aaKnown RBP10.91□□□□□ -0.66
PRPF40B-214ENST00000551320 DNMT1P26358 1616 aaKnown RBP10.91□□□□□ -0.66
PRPF40B-214ENST00000551320 HSPA1LP34931 641 aa10.9□□□□□ -0.66
PRPF40B-214ENST00000551320 PKD2Q13563 968 aa10.9□□□□□ -0.66
PRPF40B-214ENST00000551320 ZNF142P52746 1687 aaPredicted RBP10.89□□□□□ -0.67
PRPF40B-214ENST00000551320 A2ML1A8K2U0 1454 aa10.89□□□□□ -0.67
PRPF40B-214ENST00000551320 CCDC141Q6ZP82 1450 aa10.89□□□□□ -0.67
PRPF40B-214ENST00000551320 SOCS7O14512 581 aa10.89□□□□□ -0.67
PRPF40B-214ENST00000551320 PROM2Q8N271 834 aa10.88□□□□□ -0.67
PRPF40B-214ENST00000551320 NEURL4Q96JN8 1562 aa10.88□□□□□ -0.67
PRPF40B-214ENST00000551320 CFAP65Q6ZU64 1925 aaKnown RBP10.88□□□□□ -0.67
PRPF40B-214ENST00000551320 RTEL1-TNFRSF6BF6WH68 1400 aa10.87□□□□□ -0.67
PRPF40B-214ENST00000551320 PLA2R1Q13018 1463 aa10.87□□□□□ -0.67
PRPF40B-214ENST00000551320 TSPY4P0CV99 314 aa10.86□□□□□ -0.67
PRPF40B-214ENST00000551320 TSPY10P0CW01 314 aa10.86□□□□□ -0.67
PRPF40B-214ENST00000551320 LRRC9Q6ZRR7 1453 aa10.86□□□□□ -0.67
PRPF40B-214ENST00000551320 MIA2Q96PC5 1412 aa10.85□□□□□ -0.67
PRPF40B-214ENST00000551320 KDM5DQ9BY66 1539 aa10.85□□□□□ -0.67
PRPF40B-214ENST00000551320 ZNF692Q9BU19 519 aaPredicted RBP10.85□□□□□ -0.67
PRPF40B-214ENST00000551320 RRP7BPQ9NSQ0 103 aa10.85□□□□□ -0.67
PRPF40B-214ENST00000551320 CHIC2Q9UKJ5 165 aa10.85□□□□□ -0.67
PRPF40B-214ENST00000551320 PZPP20742 1482 aa10.85□□□□□ -0.67
PRPF40B-214ENST00000551320 SPDYE2BA6NHP3 402 aa10.84□□□□□ -0.67
PRPF40B-214ENST00000551320 SPDYE6P0CI01 402 aa10.84□□□□□ -0.67
PRPF40B-214ENST00000551320 SPDYE2Q495Y8 402 aa10.84□□□□□ -0.67
PRPF40B-214ENST00000551320 ANKLE2Q86XL3 938 aa10.84□□□□□ -0.67
PRPF40B-214ENST00000551320 RBM33Q96EV2 1170 aaKnown RBP10.84□□□□□ -0.67
PRPF40B-214ENST00000551320 SHANK2Q9UPX8 1470 aa10.83□□□□□ -0.68
PRPF40B-214ENST00000551320 VPS8Q8N3P4 1428 aa10.83□□□□□ -0.68
PRPF40B-214ENST00000551320 LTKP29376 864 aa10.82□□□□□ -0.68
PRPF40B-214ENST00000551320 THEMISQ8N1K5 641 aaPredicted RBP10.82□□□□□ -0.68
PRPF40B-214ENST00000551320 ABCC3O15438 1527 aa10.82□□□□□ -0.68
PRPF40B-214ENST00000551320 STRCP1A6NGW2 1772 aa10.82□□□□□ -0.68
PRPF40B-214ENST00000551320 NPHP4O75161 1426 aaPredicted RBP10.82□□□□□ -0.68
PRPF40B-214ENST00000551320 VWDEQ8N2E2 1590 aa10.82□□□□□ -0.68
PRPF40B-214ENST00000551320 UGGT1Q9NYU2 1555 aa10.82□□□□□ -0.68
PRPF40B-214ENST00000551320 IQSEC2Q5JU85 1478 aa10.81□□□□□ -0.68
PRPF40B-214ENST00000551320 CEP152O94986 1710 aa10.81□□□□□ -0.68
PRPF40B-214ENST00000551320 POLR1AO95602 1720 aaPredicted RBP10.81□□□□□ -0.68
PRPF40B-214ENST00000551320 ALKQ9UM73 1620 aa10.81□□□□□ -0.68
PRPF40B-214ENST00000551320 ARHGEF5Q12774 1597 aa10.81□□□□□ -0.68
PRPF40B-214ENST00000551320 MROH1Q8NDA8 1641 aa10.8□□□□□ -0.68
PRPF40B-214ENST00000551320 SSUH2Q9Y2M2 353 aa10.79□□□□□ -0.68
PRPF40B-214ENST00000551320 ERVK-7P63135 1459 aa10.79□□□□□ -0.68
PRPF40B-214ENST00000551320 FAM135AQ9P2D6 1515 aa10.79□□□□□ -0.68
PRPF40B-214ENST00000551320 ABCC5O15440 1437 aa10.78□□□□□ -0.68
PRPF40B-214ENST00000551320 MYOM3Q5VTT5 1437 aa10.78□□□□□ -0.68
PRPF40B-214ENST00000551320 TOM1O60784 492 aa10.78□□□□□ -0.68
PRPF40B-214ENST00000551320 RSPH4AQ5TD94 716 aa10.78□□□□□ -0.68
PRPF40B-214ENST00000551320 FBXO3Q9UK99 471 aa10.78□□□□□ -0.68
PRPF40B-214ENST00000551320 TXNDC2Q86VQ3 553 aa10.77□□□□□ -0.69
PRPF40B-214ENST00000551320 MED1Q15648 1581 aaPredicted RBP10.77□□□□□ -0.69
PRPF40B-214ENST00000551320 KIF15Q9NS87 1388 aa10.77□□□□□ -0.69
PRPF40B-214ENST00000551320 RNF17Q9BXT8 1623 aaKnown RBP10.76□□□□□ -0.69
PRPF40B-214ENST00000551320 NLRP1Q9C000 1473 aa10.76□□□□□ -0.69
PRPF40B-214ENST00000551320 LRRC7Q96NW7 1537 aa10.76□□□□□ -0.69
PRPF40B-214ENST00000551320 PPARGC1BQ86YN6 1023 aaKnown RBP10.76□□□□□ -0.69
PRPF40B-214ENST00000551320 IQGAP1P46940 1657 aa10.76□□□□□ -0.69
PRPF40B-214ENST00000551320 CPS1P31327 1500 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms