RNA–Protein interactions for RNA: ENST00000550715.5

LETMD1-225, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 907 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-225ENST00000550715 CD109Q6YHK3 1445 aa13.67□□□□□ -0.22
LETMD1-225ENST00000550715 KCNH8Q96L42 1107 aa13.67□□□□□ -0.22
LETMD1-225ENST00000550715 KDM5BQ9UGL1 1544 aa13.66□□□□□ -0.22
LETMD1-225ENST00000550715 ARID4BQ4LE39 1312 aaPredicted RBP13.65□□□□□ -0.22
LETMD1-225ENST00000550715 TPRNQ4KMQ1 711 aa13.64□□□□□ -0.23
LETMD1-225ENST00000550715 MAGI3Q5TCQ9 1506 aa13.64□□□□□ -0.23
LETMD1-225ENST00000550715 KCNV2Q8TDN2 545 aa13.63□□□□□ -0.23
LETMD1-225ENST00000550715 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.63□□□□□ -0.23
LETMD1-225ENST00000550715 CARMIL2Q6F5E8 1435 aa13.63□□□□□ -0.23
LETMD1-225ENST00000550715 MADDQ8WXG6 1647 aa13.61□□□□□ -0.23
LETMD1-225ENST00000550715 RAPGEF3O95398 923 aa13.61□□□□□ -0.23
LETMD1-225ENST00000550715 P3H3Q8IVL6 736 aa13.61□□□□□ -0.23
LETMD1-225ENST00000550715 ATN1P54259 1190 aaPredicted RBP13.6□□□□□ -0.23
LETMD1-225ENST00000550715 ZCCHC11Q5TAX3 1644 aaKnown RBP13.59□□□□□ -0.23
LETMD1-225ENST00000550715 WDR7Q9Y4E6 1490 aa13.59□□□□□ -0.23
LETMD1-225ENST00000550715 BCORL1Q5H9F3 1711 aa13.59□□□□□ -0.23
LETMD1-225ENST00000550715 IGF1RP08069 1367 aa13.58□□□□□ -0.23
LETMD1-225ENST00000550715 BIVM-ERCC5R4GMW8 1640 aa13.58□□□□□ -0.24
LETMD1-225ENST00000550715 NCKAP5LQ9HCH0 1330 aa13.58□□□□□ -0.24
LETMD1-225ENST00000550715 CLCN6P51797 869 aa13.57□□□□□ -0.24
LETMD1-225ENST00000550715 ARAP3Q8WWN8 1544 aa13.57□□□□□ -0.24
LETMD1-225ENST00000550715 ATMINO43313 823 aaPredicted RBP13.55□□□□□ -0.24
LETMD1-225ENST00000550715 RIMS1Q86UR5 1692 aaKnown RBP13.54□□□□□ -0.24
LETMD1-225ENST00000550715 DPY19L2Q6NUT2 758 aa13.54□□□□□ -0.24
LETMD1-225ENST00000550715 LARP6Q9BRS8 491 aaKnown RBP13.54□□□□□ -0.24
LETMD1-225ENST00000550715 GABBR2O75899 941 aa13.52□□□□□ -0.25
LETMD1-225ENST00000550715 DISP1Q96F81 1524 aa13.52□□□□□ -0.25
LETMD1-225ENST00000550715 CFAP43Q8NDM7 1665 aa13.51□□□□□ -0.25
LETMD1-225ENST00000550715 ASTLQ6HA08 431 aaPredicted RBP13.51□□□□□ -0.25
LETMD1-225ENST00000550715 POTEHQ6S545 545 aa13.51□□□□□ -0.25
LETMD1-225ENST00000550715 YEATS2Q9ULM3 1422 aa13.5□□□□□ -0.25
LETMD1-225ENST00000550715 CRISPLD2Q9H0B8 497 aa13.5□□□□□ -0.25
LETMD1-225ENST00000550715 PDE4AP27815 886 aa13.49□□□□□ -0.25
LETMD1-225ENST00000550715 E2F4Q16254 413 aa13.49□□□□□ -0.25
LETMD1-225ENST00000550715 PDCD7Q8N8D1 485 aaKnown RBP13.49□□□□□ -0.25
LETMD1-225ENST00000550715 STRCQ7RTU9 1775 aa13.46□□□□□ -0.25
LETMD1-225ENST00000550715 IRX5P78411 483 aaPredicted RBP13.46□□□□□ -0.25
LETMD1-225ENST00000550715 DDX27Q96GQ7 796 aaKnown RBP13.46□□□□□ -0.25
LETMD1-225ENST00000550715 MLECQ14165 292 aa13.45□□□□□ -0.26
LETMD1-225ENST00000550715 MFSD10Q14728 455 aa13.45□□□□□ -0.26
LETMD1-225ENST00000550715 CEBPAP49715 358 aaPredicted RBP13.44□□□□□ -0.26
LETMD1-225ENST00000550715 MICALL2Q8IY33 904 aa13.44□□□□□ -0.26
LETMD1-225ENST00000550715 CARMIL1Q5VZK9 1371 aa13.43□□□□□ -0.26
LETMD1-225ENST00000550715 LTBP4Q8N2S1 1624 aa13.42□□□□□ -0.26
LETMD1-225ENST00000550715 IQGAP2Q13576 1575 aa13.42□□□□□ -0.26
LETMD1-225ENST00000550715 IER5LQ5T953 404 aa13.42□□□□□ -0.26
LETMD1-225ENST00000550715 DCBLD2Q96PD2 775 aa13.42□□□□□ -0.26
LETMD1-225ENST00000550715 OCEL1Q9H607 264 aa13.42□□□□□ -0.26
LETMD1-225ENST00000550715 PHLDB1Q86UU1 1377 aa13.42□□□□□ -0.26
LETMD1-225ENST00000550715 UBAP1LF5GYI3 381 aa13.41□□□□□ -0.26
LETMD1-225ENST00000550715 PELP1Q8IZL8 1130 aaKnown RBP13.41□□□□□ -0.26
LETMD1-225ENST00000550715 PLCG2P16885 1265 aa13.4□□□□□ -0.26
LETMD1-225ENST00000550715 ARHGEF1Q92888 912 aaKnown RBP13.4□□□□□ -0.26
LETMD1-225ENST00000550715 ARID3CA6NKF2 412 aa13.38□□□□□ -0.27
LETMD1-225ENST00000550715 PTPRTO14522 1441 aa13.38□□□□□ -0.27
LETMD1-225ENST00000550715 FRMPD1Q5SYB0 1578 aa13.37□□□□□ -0.27
LETMD1-225ENST00000550715 PPP1R15BQ5SWA1 713 aa13.37□□□□□ -0.27
LETMD1-225ENST00000550715 BOLA1Q9Y3E2 137 aa13.37□□□□□ -0.27
LETMD1-225ENST00000550715 HSPA1LP34931 641 aa13.36□□□□□ -0.27
LETMD1-225ENST00000550715 KIF27Q86VH2 1401 aa13.36□□□□□ -0.27
LETMD1-225ENST00000550715 IQSEC2Q5JU85 1478 aa13.36□□□□□ -0.27
LETMD1-225ENST00000550715 G3V3G9 751 aa13.35□□□□□ -0.27
LETMD1-225ENST00000550715 GPHNQ9NQX3 736 aaPredicted RBP13.35□□□□□ -0.27
LETMD1-225ENST00000550715 POGZQ7Z3K3 1410 aa13.35□□□□□ -0.27
LETMD1-225ENST00000550715 MED1Q15648 1581 aaPredicted RBP13.35□□□□□ -0.27
LETMD1-225ENST00000550715 COLQQ9Y215 455 aaPredicted RBP13.34□□□□□ -0.27
LETMD1-225ENST00000550715 UGGT2Q9NYU1 1516 aa13.34□□□□□ -0.27
LETMD1-225ENST00000550715 SIGLEC1Q9BZZ2 1709 aa13.33□□□□□ -0.27
LETMD1-225ENST00000550715 SEC24BO95487 1268 aa13.33□□□□□ -0.28
LETMD1-225ENST00000550715 NEO1Q92859 1461 aa13.32□□□□□ -0.28
LETMD1-225ENST00000550715 SEMA3EO15041 775 aa13.32□□□□□ -0.28
LETMD1-225ENST00000550715 TMC2Q8TDI7 906 aa13.32□□□□□ -0.28
LETMD1-225ENST00000550715 KIAA0556O60303 1618 aa13.31□□□□□ -0.28
LETMD1-225ENST00000550715 PREX1Q8TCU6 1659 aa13.31□□□□□ -0.28
LETMD1-225ENST00000550715 CAMK2BQ13554 666 aa13.31□□□□□ -0.28
LETMD1-225ENST00000550715 DSG2Q14126 1118 aa13.31□□□□□ -0.28
LETMD1-225ENST00000550715 LMOD2Q6P5Q4 547 aa13.3□□□□□ -0.28
LETMD1-225ENST00000550715 TMEM121BQ9BXQ6 578 aaPredicted RBP13.3□□□□□ -0.28
LETMD1-225ENST00000550715 FANCAO15360 1455 aa13.29□□□□□ -0.28
LETMD1-225ENST00000550715 ARHGEF40Q8TER5 1519 aa13.29□□□□□ -0.28
LETMD1-225ENST00000550715 ABCA8O94911 1581 aa13.29□□□□□ -0.28
LETMD1-225ENST00000550715 TTC37Q6PGP7 1564 aa13.29□□□□□ -0.28
LETMD1-225ENST00000550715 SLC39A7Q92504 469 aa13.28□□□□□ -0.28
LETMD1-225ENST00000550715 ZNF335Q9H4Z2 1342 aaPredicted RBP13.28□□□□□ -0.28
LETMD1-225ENST00000550715 UHRF1BP1Q6BDS2 1440 aa13.28□□□□□ -0.28
LETMD1-225ENST00000550715 AKNAQ7Z591 1439 aa13.28□□□□□ -0.28
LETMD1-225ENST00000550715 C2orf72A6NCS6 295 aa13.27□□□□□ -0.29
LETMD1-225ENST00000550715 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.27□□□□□ -0.29
LETMD1-225ENST00000550715 ABCA9Q8IUA7 1624 aa13.27□□□□□ -0.29
LETMD1-225ENST00000550715 FER1L4A9Z1Z3 1794 aa13.27□□□□□ -0.29
LETMD1-225ENST00000550715 POTEFA5A3E0 1075 aa13.26□□□□□ -0.29
LETMD1-225ENST00000550715 DENND4BO75064 1496 aaPredicted RBP13.26□□□□□ -0.29
LETMD1-225ENST00000550715 ATP10BO94823 1461 aa13.26□□□□□ -0.29
LETMD1-225ENST00000550715 POTEIP0CG38 1075 aa13.26□□□□□ -0.29
LETMD1-225ENST00000550715 PIP4K2BP78356 416 aa13.26□□□□□ -0.29
LETMD1-225ENST00000550715 L3MBTL3Q96JM7 780 aaPredicted RBP13.26□□□□□ -0.29
LETMD1-225ENST00000550715 METRNQ9UJH8 293 aa13.26□□□□□ -0.29
LETMD1-225ENST00000550715 SETD1BQ9UPS6 1966 aaKnown RBP13.26□□□□□ -0.29
LETMD1-225ENST00000550715 TESPA1A2RU30 521 aaPredicted RBP13.25□□□□□ -0.29
LETMD1-225ENST00000550715 FHOD3Q2V2M9 1422 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms