RNA–Protein interactions for RNA: ENST00000550070.6

ERBB3-214, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-214ENST00000550070 TMC1Q8TDI8 760 aa13.87□□□□□ -0.19
ERBB3-214ENST00000550070 CARD11Q9BXL7 1154 aa13.87□□□□□ -0.19
ERBB3-214ENST00000550070 ROCK2O75116 1388 aaKnown RBP13.87□□□□□ -0.19
ERBB3-214ENST00000550070 CCDC136Q96JN2 1154 aa13.87□□□□□ -0.19
ERBB3-214ENST00000550070 NUP155O75694 1391 aa13.87□□□□□ -0.19
ERBB3-214ENST00000550070 CHD1O14646 1710 aa13.86□□□□□ -0.19
ERBB3-214ENST00000550070 CDC42BPAQ5VT25 1732 aa13.86□□□□□ -0.19
ERBB3-214ENST00000550070 MAGI1Q96QZ7 1491 aaPredicted RBP13.86□□□□□ -0.19
ERBB3-214ENST00000550070 ST20-MTHFSA0A0A6YYL1 179 aa13.84□□□□□ -0.19
ERBB3-214ENST00000550070 KDM2AQ9Y2K7 1162 aa13.84□□□□□ -0.19
ERBB3-214ENST00000550070 KIF15Q9NS87 1388 aa13.84□□□□□ -0.19
ERBB3-214ENST00000550070 ARHGEF12Q9NZN5 1544 aa13.84□□□□□ -0.19
ERBB3-214ENST00000550070 NOP58Q9Y2X3 529 aaKnown RBP13.84□□□□□ -0.19
ERBB3-214ENST00000550070 C9orf84Q5VXU9 1444 aa13.83□□□□□ -0.2
ERBB3-214ENST00000550070 LRPPRCP42704 1394 aaKnown RBP13.83□□□□□ -0.2
ERBB3-214ENST00000550070 PAK3O75914 559 aaPredicted RBP13.83□□□□□ -0.2
ERBB3-214ENST00000550070 DCAF11Q8TEB1 546 aa13.82□□□□□ -0.2
ERBB3-214ENST00000550070 ABCC10Q5T3U5 1492 aa13.82□□□□□ -0.2
ERBB3-214ENST00000550070 SHANK2Q9UPX8 1470 aa13.82□□□□□ -0.2
ERBB3-214ENST00000550070 KDM5DQ9BY66 1539 aa13.81□□□□□ -0.2
ERBB3-214ENST00000550070 ERCC6L2Q5T890 1561 aa13.81□□□□□ -0.2
ERBB3-214ENST00000550070 MYBBP1AQ9BQG0 1328 aaKnown RBP13.81□□□□□ -0.2
ERBB3-214ENST00000550070 PLEKHD1A6NEE1 506 aa13.81□□□□□ -0.2
ERBB3-214ENST00000550070 JPH4Q96JJ6 628 aa13.81□□□□□ -0.2
ERBB3-214ENST00000550070 BRD4O60885 1362 aaPredicted RBP13.81□□□□□ -0.2
ERBB3-214ENST00000550070 CARMIL2Q6F5E8 1435 aa13.8□□□□□ -0.2
ERBB3-214ENST00000550070 E9PCH4 1651 aa13.8□□□□□ -0.2
ERBB3-214ENST00000550070 RALBP1Q15311 655 aa13.79□□□□□ -0.2
ERBB3-214ENST00000550070 MYT1LQ9UL68 1186 aa13.79□□□□□ -0.2
ERBB3-214ENST00000550070 TSPY4P0CV99 314 aa13.78□□□□□ -0.2
ERBB3-214ENST00000550070 TSPY10P0CW01 314 aa13.78□□□□□ -0.2
ERBB3-214ENST00000550070 ATP10BO94823 1461 aa13.78□□□□□ -0.2
ERBB3-214ENST00000550070 PTPRGP23470 1445 aa13.78□□□□□ -0.2
ERBB3-214ENST00000550070 HNRNPMP52272 730 aaKnown RBP eCLIP13.78□□□□□ -0.2
ERBB3-214ENST00000550070 KTN1Q86UP2 1357 aaKnown RBP13.78□□□□□ -0.2
ERBB3-214ENST00000550070 ABCA8O94911 1581 aa13.77□□□□□ -0.2
ERBB3-214ENST00000550070 DEKP35659 375 aaKnown RBP13.76□□□□□ -0.21
ERBB3-214ENST00000550070 NUP160Q12769 1436 aa13.76□□□□□ -0.21
ERBB3-214ENST00000550070 RRP1P56182 461 aaKnown RBP13.76□□□□□ -0.21
ERBB3-214ENST00000550070 IPO9Q96P70 1041 aaKnown RBP13.76□□□□□ -0.21
ERBB3-214ENST00000550070 NBR1Q14596 966 aa13.75□□□□□ -0.21
ERBB3-214ENST00000550070 CHMP4AQ9BY43 222 aa13.75□□□□□ -0.21
ERBB3-214ENST00000550070 ANP32AP39687 249 aaKnown RBP13.74□□□□□ -0.21
ERBB3-214ENST00000550070 EXOC6Q8TAG9 804 aa13.74□□□□□ -0.21
ERBB3-214ENST00000550070 SALL2Q9Y467 1007 aaPredicted RBP13.74□□□□□ -0.21
ERBB3-214ENST00000550070 ARHGEF5Q12774 1597 aa13.73□□□□□ -0.21
ERBB3-214ENST00000550070 TRPM1Q7Z4N2 1603 aa13.73□□□□□ -0.21
ERBB3-214ENST00000550070 TAF7LQ5H9L4 462 aa13.73□□□□□ -0.21
ERBB3-214ENST00000550070 RCAN3Q9UKA8 241 aa13.73□□□□□ -0.21
ERBB3-214ENST00000550070 PARD3Q8TEW0 1356 aa13.73□□□□□ -0.21
ERBB3-214ENST00000550070 FAM135AQ9P2D6 1515 aa13.73□□□□□ -0.21
ERBB3-214ENST00000550070 NLRP13Q86W25 1043 aa13.72□□□□□ -0.21
ERBB3-214ENST00000550070 PRAG1Q86YV5 1406 aa13.72□□□□□ -0.21
ERBB3-214ENST00000550070 PER1O15534 1290 aaPredicted RBP13.71□□□□□ -0.21
ERBB3-214ENST00000550070 NBPF1Q3BBV0 1214 aa13.71□□□□□ -0.21
ERBB3-214ENST00000550070 BCL11BQ9C0K0 894 aaPredicted RBP13.71□□□□□ -0.21
ERBB3-214ENST00000550070 HAP1P54257 671 aaPredicted RBP13.7□□□□□ -0.22
ERBB3-214ENST00000550070 ZBTB47Q9UFB7 747 aaPredicted RBP13.7□□□□□ -0.22
ERBB3-214ENST00000550070 SAMD9LQ8IVG5 1584 aa13.7□□□□□ -0.22
ERBB3-214ENST00000550070 RGL3Q3MIN7 710 aa13.7□□□□□ -0.22
ERBB3-214ENST00000550070 CDC42BPBQ9Y5S2 1711 aa13.69□□□□□ -0.22
ERBB3-214ENST00000550070 CDCA7LQ96GN5 454 aa13.69□□□□□ -0.22
ERBB3-214ENST00000550070 CCDC141Q6ZP82 1450 aa13.69□□□□□ -0.22
ERBB3-214ENST00000550070 CCDC144AA2RUR9 1427 aa13.69□□□□□ -0.22
ERBB3-214ENST00000550070 FGD1P98174 961 aa13.68□□□□□ -0.22
ERBB3-214ENST00000550070 PDE3BQ13370 1112 aa13.68□□□□□ -0.22
ERBB3-214ENST00000550070 DHX37Q8IY37 1157 aaKnown RBP13.67□□□□□ -0.22
ERBB3-214ENST00000550070 PLA2R1Q13018 1463 aa13.67□□□□□ -0.22
ERBB3-214ENST00000550070 TCERG1O14776 1098 aaKnown RBP13.66□□□□□ -0.22
ERBB3-214ENST00000550070 GPRASP1Q5JY77 1395 aa13.66□□□□□ -0.22
ERBB3-214ENST00000550070 A2MP01023 1474 aa13.66□□□□□ -0.22
ERBB3-214ENST00000550070 DISP3Q9P2K9 1392 aa13.66□□□□□ -0.22
ERBB3-214ENST00000550070 CC2D1BQ5T0F9 858 aaKnown RBP13.66□□□□□ -0.22
ERBB3-214ENST00000550070 COL17A1Q9UMD9 1497 aaPredicted RBP13.65□□□□□ -0.22
ERBB3-214ENST00000550070 TESK2Q96S53 571 aa13.65□□□□□ -0.22
ERBB3-214ENST00000550070 PREX2Q70Z35 1606 aa13.65□□□□□ -0.22
ERBB3-214ENST00000550070 FBXO3Q9UK99 471 aa13.65□□□□□ -0.22
ERBB3-214ENST00000550070 PDE4AP27815 886 aa13.64□□□□□ -0.23
ERBB3-214ENST00000550070 PRDM15P57071 1507 aaPredicted RBP13.64□□□□□ -0.23
ERBB3-214ENST00000550070 RSPH4AQ5TD94 716 aa13.63□□□□□ -0.23
ERBB3-214ENST00000550070 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.63□□□□□ -0.231e-11■■□□□ 11.6
ERBB3-214ENST00000550070 PLIN1O60240 522 aa13.63□□□□□ -0.23
ERBB3-214ENST00000550070 PANK3Q9H999 370 aa13.63□□□□□ -0.23
ERBB3-214ENST00000550070 MYO5CQ9NQX4 1742 aa13.63□□□□□ -0.23
ERBB3-214ENST00000550070 UNC13BO14795 1591 aa13.63□□□□□ -0.23
ERBB3-214ENST00000550070 LAMC1P11047 1609 aa13.63□□□□□ -0.23
ERBB3-214ENST00000550070 OSCARQ8IYS5 282 aa13.63□□□□□ -0.23
ERBB3-214ENST00000550070 WASHC2CQ9Y4E1 1318 aa13.62□□□□□ -0.23
ERBB3-214ENST00000550070 BLMP54132 1417 aaPredicted RBP13.62□□□□□ -0.23
ERBB3-214ENST00000550070 SYCP2Q9BX26 1530 aa13.62□□□□□ -0.23
ERBB3-214ENST00000550070 SAMD1Q6SPF0 538 aaPredicted RBP13.62□□□□□ -0.23
ERBB3-214ENST00000550070 BACH2Q9BYV9 841 aa13.62□□□□□ -0.23
ERBB3-214ENST00000550070 ERBINQ96RT1 1412 aa13.61□□□□□ -0.23
ERBB3-214ENST00000550070 BRD2P25440 801 aaKnown RBP13.61□□□□□ -0.23
ERBB3-214ENST00000550070 MAST1Q9Y2H9 1570 aa13.6□□□□□ -0.23
ERBB3-214ENST00000550070 CLASP1Q7Z460 1538 aa13.6□□□□□ -0.23
ERBB3-214ENST00000550070 INSRP06213 1382 aa13.6□□□□□ -0.23
ERBB3-214ENST00000550070 MS4A1P11836 297 aa13.6□□□□□ -0.23
ERBB3-214ENST00000550070 RTL5Q5HYW3 569 aaPredicted RBP13.59□□□□□ -0.23
ERBB3-214ENST00000550070 CRBNQ96SW2 442 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms