RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 DEPDC5O75140 1603 aa19.98■□□□□ 0.79
DDX54-206ENST00000549271 MED14O60244 1454 aa19.97■□□□□ 0.79
DDX54-206ENST00000549271 TNRQ92752 1358 aa19.96■□□□□ 0.79
DDX54-206ENST00000549271 STRCP1A6NGW2 1772 aa19.95■□□□□ 0.78
DDX54-206ENST00000549271 PZPP20742 1482 aa19.95■□□□□ 0.78
DDX54-206ENST00000549271 FYCO1Q9BQS8 1478 aa19.95■□□□□ 0.78
DDX54-206ENST00000549271 FBXO31Q5XUX0 539 aaPredicted RBP19.94■□□□□ 0.78
DDX54-206ENST00000549271 ANKLE2Q86XL3 938 aa19.94■□□□□ 0.78
DDX54-206ENST00000549271 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.94■□□□□ 0.78
DDX54-206ENST00000549271 CFDP1Q9UEE9 299 aaPredicted RBP19.93■□□□□ 0.78
DDX54-206ENST00000549271 NPHP4O75161 1426 aaPredicted RBP19.93■□□□□ 0.78
DDX54-206ENST00000549271 FAM135AQ9P2D6 1515 aa19.92■□□□□ 0.78
DDX54-206ENST00000549271 RNF17Q9BXT8 1623 aaKnown RBP19.92■□□□□ 0.78
DDX54-206ENST00000549271 IQGAP1P46940 1657 aa19.92■□□□□ 0.78
DDX54-206ENST00000549271 RGS17Q9UGC6 210 aaPredicted RBP19.92■□□□□ 0.78
DDX54-206ENST00000549271 LRRC7Q96NW7 1537 aa19.91■□□□□ 0.78
DDX54-206ENST00000549271 KDM5DQ9BY66 1539 aa19.91■□□□□ 0.78
DDX54-206ENST00000549271 SYNMO15061 1565 aa19.9■□□□□ 0.78
DDX54-206ENST00000549271 RTEL1-TNFRSF6BF6WH68 1400 aa19.89■□□□□ 0.77
DDX54-206ENST00000549271 DHX29Q7Z478 1369 aaKnown RBP19.89■□□□□ 0.77
DDX54-206ENST00000549271 THEMISQ8N1K5 641 aaPredicted RBP19.89■□□□□ 0.77
DDX54-206ENST00000549271 NLRP1Q9C000 1473 aa19.89■□□□□ 0.77
DDX54-206ENST00000549271 UGGT1Q9NYU2 1555 aa19.89■□□□□ 0.77
DDX54-206ENST00000549271 MBD5Q9P267 1494 aa19.88■□□□□ 0.77
DDX54-206ENST00000549271 CCNB3Q8WWL7 1395 aa19.88■□□□□ 0.77
DDX54-206ENST00000549271 MIA2Q96PC5 1412 aa19.87■□□□□ 0.77
DDX54-206ENST00000549271 SENP3Q9H4L4 574 aaPredicted RBP19.85■□□□□ 0.77
DDX54-206ENST00000549271 ZNF644Q9H582 1327 aaPredicted RBP19.83■□□□□ 0.77
DDX54-206ENST00000549271 TIAM1Q13009 1591 aa19.83■□□□□ 0.76
DDX54-206ENST00000549271 ZC3H13Q5T200 1668 aaKnown RBP19.82■□□□□ 0.76
DDX54-206ENST00000549271 KIF3BO15066 747 aa19.82■□□□□ 0.76
DDX54-206ENST00000549271 WASHC2CQ9Y4E1 1318 aa19.8■□□□□ 0.76
DDX54-206ENST00000549271 XIRP1Q702N8 1843 aaKnown RBP19.8■□□□□ 0.76
DDX54-206ENST00000549271 MTUS2Q5JR59 1369 aa19.76■□□□□ 0.75
DDX54-206ENST00000549271 POTEAQ6S8J7 498 aa19.76■□□□□ 0.75
DDX54-206ENST00000549271 CCDC141Q6ZP82 1450 aa19.73■□□□□ 0.75
DDX54-206ENST00000549271 UBR1Q8IWV7 1749 aa19.73■□□□□ 0.75
DDX54-206ENST00000549271 FAM135BQ49AJ0 1406 aa19.71■□□□□ 0.75
DDX54-206ENST00000549271 SETD1AO15047 1707 aaKnown RBP19.7■□□□□ 0.74
DDX54-206ENST00000549271 ABCC3O15438 1527 aa19.7■□□□□ 0.74
DDX54-206ENST00000549271 EHBP1L1Q8N3D4 1523 aa19.7■□□□□ 0.74
DDX54-206ENST00000549271 ERVK-7P63135 1459 aa19.69■□□□□ 0.74
DDX54-206ENST00000549271 SCAF11Q99590 1463 aaKnown RBP19.69■□□□□ 0.74
DDX54-206ENST00000549271 CEP162Q5TB80 1403 aa19.68■□□□□ 0.74
DDX54-206ENST00000549271 CAMSAP2Q08AD1 1489 aa19.67■□□□□ 0.74
DDX54-206ENST00000549271 NCOA2Q15596 1464 aa19.67■□□□□ 0.74
DDX54-206ENST00000549271 ARHGAP23Q9P227 1491 aa19.67■□□□□ 0.74
DDX54-206ENST00000549271 RSPH4AQ5TD94 716 aa19.66■□□□□ 0.74
DDX54-206ENST00000549271 SLIT1O75093 1534 aa19.66■□□□□ 0.74
DDX54-206ENST00000549271 CFAP65Q6ZU64 1925 aaKnown RBP19.65■□□□□ 0.74
DDX54-206ENST00000549271 ARHGEF5Q12774 1597 aa19.64■□□□□ 0.73
DDX54-206ENST00000549271 ROBO1Q9Y6N7 1651 aa19.64■□□□□ 0.73
DDX54-206ENST00000549271 LTKP29376 864 aa19.63■□□□□ 0.73
DDX54-206ENST00000549271 MROH1Q8NDA8 1641 aa19.62■□□□□ 0.73
DDX54-206ENST00000549271 EIF2AK4Q9P2K8 1649 aaKnown RBP19.62■□□□□ 0.73
DDX54-206ENST00000549271 CEP152O94986 1710 aa19.61■□□□□ 0.73
DDX54-206ENST00000549271 TXNDC2Q86VQ3 553 aa19.59■□□□□ 0.73
DDX54-206ENST00000549271 MAP3K1Q13233 1512 aa19.58■□□□□ 0.73
DDX54-206ENST00000549271 TMEM94Q12767 1356 aa19.57■□□□□ 0.72
DDX54-206ENST00000549271 MAST1Q9Y2H9 1570 aa19.57■□□□□ 0.72
DDX54-206ENST00000549271 LRRC9Q6ZRR7 1453 aa19.55■□□□□ 0.72
DDX54-206ENST00000549271 TSPY4P0CV99 314 aa19.55■□□□□ 0.72
DDX54-206ENST00000549271 TSPY10P0CW01 314 aa19.55■□□□□ 0.72
DDX54-206ENST00000549271 PHLPP1O60346 1717 aa19.54■□□□□ 0.72
DDX54-206ENST00000549271 PIK3C2BO00750 1634 aa19.53■□□□□ 0.72
DDX54-206ENST00000549271 EID1Q9Y6B2 187 aa19.52■□□□□ 0.72
DDX54-206ENST00000549271 ARHGAP31Q2M1Z3 1444 aa19.51■□□□□ 0.71
DDX54-206ENST00000549271 TET3O43151 1660 aa19.5■□□□□ 0.71
DDX54-206ENST00000549271 KDM5AP29375 1690 aaKnown RBP19.5■□□□□ 0.71
DDX54-206ENST00000549271 TMEM2Q9UHN6 1383 aa19.5■□□□□ 0.71
DDX54-206ENST00000549271 KCNA6P17658 529 aa19.5■□□□□ 0.71
DDX54-206ENST00000549271 UPF1Q92900 1129 aaKnown RBP eCLIP19.5■□□□□ 0.71
DDX54-206ENST00000549271 PRDM15P57071 1507 aaPredicted RBP19.5■□□□□ 0.71
DDX54-206ENST00000549271 JCADQ9P266 1359 aa19.49■□□□□ 0.71
DDX54-206ENST00000549271 NWD1Q149M9 1564 aa19.49■□□□□ 0.71
DDX54-206ENST00000549271 NKTRP30414 1462 aaKnown RBP19.47■□□□□ 0.71
DDX54-206ENST00000549271 PROSER2Q86WR7 435 aaPredicted RBP19.46■□□□□ 0.71
DDX54-206ENST00000549271 RBM33Q96EV2 1170 aaKnown RBP19.46■□□□□ 0.71
DDX54-206ENST00000549271 COL16A1Q07092 1604 aaPredicted RBP19.46■□□□□ 0.71
DDX54-206ENST00000549271 EFCAB6Q5THR3 1501 aa19.44■□□□□ 0.7
DDX54-206ENST00000549271 DUOX2Q9NRD8 1548 aa19.44■□□□□ 0.7
DDX54-206ENST00000549271 LRP6O75581 1613 aa19.43■□□□□ 0.7
DDX54-206ENST00000549271 SLAIN2Q9P270 581 aa19.43■□□□□ 0.7
DDX54-206ENST00000549271 MSH6P52701 1360 aa19.42■□□□□ 0.7
DDX54-206ENST00000549271 SLC26A8Q96RN1 970 aa19.41■□□□□ 0.7
DDX54-206ENST00000549271 SRCAPQ6ZRS2 3230 aa19.41■□□□□ 0.7
DDX54-206ENST00000549271 FGD6Q6ZV73 1430 aa19.4■□□□□ 0.7
DDX54-206ENST00000549271 ZNF772Q68DY9 489 aaPredicted RBP19.39■□□□□ 0.69
DDX54-206ENST00000549271 SPATA31A6Q5VVP1 1343 aa19.39■□□□□ 0.69
DDX54-206ENST00000549271 CHD2O14647 1828 aaKnown RBP19.38■□□□□ 0.69
DDX54-206ENST00000549271 SHPRHQ149N8 1683 aa19.37■□□□□ 0.69
DDX54-206ENST00000549271 TRIM52Q96A61 297 aa19.37■□□□□ 0.69
DDX54-206ENST00000549271 STAG3Q9UJ98 1225 aa19.37■□□□□ 0.69
DDX54-206ENST00000549271 LOC105371045A0A1W2PR82 267 aa19.36■□□□□ 0.69
DDX54-206ENST00000549271 IDI1Q13907 227 aa19.36■□□□□ 0.69
DDX54-206ENST00000549271 ERBINQ96RT1 1412 aa19.35■□□□□ 0.69
DDX54-206ENST00000549271 CDK12Q9NYV4 1490 aaPredicted RBP19.35■□□□□ 0.69
DDX54-206ENST00000549271 AHDC1Q5TGY3 1603 aaPredicted RBP19.34■□□□□ 0.69
DDX54-206ENST00000549271 ADGRB3O60242 1522 aa19.34■□□□□ 0.69
DDX54-206ENST00000549271 KIF15Q9NS87 1388 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms